data_6LS1
#
_model_server_result.job_id            7lSkuyW91zn1bbNi26sIaA 
_model_server_result.datetime_utc      '2024-11-27 17:20:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ls1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    6LS1 
#
_exptl.entry_id    6LS1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LS1 
_cell.length_a            97.76 
_cell.length_b            97.76 
_cell.length_c            68.91 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LS1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 83 A CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf3 A SG CYS 47 A CYS 47 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf4 B SG CYS 5 B CYS 5 1_555 B SG CYS 83 B CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
disulf ? disulf5 B SG CYS 7 B CYS 7 1_555 B SG CYS 98 B CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
disulf ? disulf6 B SG CYS 47 B CYS 47 1_555 B SG CYS 81 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 229 n n 
C1 C2 PEG sing 230 n n 
C1 H11 PEG sing 231 n n 
C1 H12 PEG sing 232 n n 
O1 HO1 PEG sing 233 n n 
C2 O2 PEG sing 234 n n 
C2 H21 PEG sing 235 n n 
C2 H22 PEG sing 236 n n 
O2 C3 PEG sing 237 n n 
C3 C4 PEG sing 238 n n 
C3 H31 PEG sing 239 n n 
C3 H32 PEG sing 240 n n 
C4 O4 PEG sing 241 n n 
C4 H41 PEG sing 242 n n 
C4 H42 PEG sing 243 n n 
O4 HO4 PEG sing 244 n n 
#
_atom_sites.entry_id                     6LS1 
_atom_sites.fract_transf_matrix[1][1]    0.010229 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010229 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014512 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GMP A 1 201 1 GMP GMP . 
D 3 PEG A 1 202 1 PEG PEG . 
E 4 SO4 B 1 201 1 SO4 SO4 . 
F 5 HOH A 1 301 188 HOH HOH . 
F 5 HOH A 2 302 86 HOH HOH . 
F 5 HOH A 3 303 183 HOH HOH . 
F 5 HOH A 4 304 56 HOH HOH . 
F 5 HOH A 5 305 150 HOH HOH . 
F 5 HOH A 6 306 210 HOH HOH . 
F 5 HOH A 7 307 30 HOH HOH . 
F 5 HOH A 8 308 77 HOH HOH . 
F 5 HOH A 9 309 112 HOH HOH . 
F 5 HOH A 10 310 195 HOH HOH . 
F 5 HOH A 11 311 146 HOH HOH . 
F 5 HOH A 12 312 153 HOH HOH . 
F 5 HOH A 13 313 226 HOH HOH . 
F 5 HOH A 14 314 100 HOH HOH . 
F 5 HOH A 15 315 21 HOH HOH . 
F 5 HOH A 16 316 145 HOH HOH . 
F 5 HOH A 17 317 67 HOH HOH . 
F 5 HOH A 18 318 88 HOH HOH . 
F 5 HOH A 19 319 105 HOH HOH . 
F 5 HOH A 20 320 103 HOH HOH . 
F 5 HOH A 21 321 42 HOH HOH . 
F 5 HOH A 22 322 66 HOH HOH . 
F 5 HOH A 23 323 113 HOH HOH . 
F 5 HOH A 24 324 85 HOH HOH . 
F 5 HOH A 25 325 53 HOH HOH . 
F 5 HOH A 26 326 126 HOH HOH . 
F 5 HOH A 27 327 52 HOH HOH . 
F 5 HOH A 28 328 7 HOH HOH . 
F 5 HOH A 29 329 119 HOH HOH . 
F 5 HOH A 30 330 14 HOH HOH . 
F 5 HOH A 31 331 141 HOH HOH . 
F 5 HOH A 32 332 1 HOH HOH . 
F 5 HOH A 33 333 70 HOH HOH . 
F 5 HOH A 34 334 8 HOH HOH . 
F 5 HOH A 35 335 205 HOH HOH . 
F 5 HOH A 36 336 33 HOH HOH . 
F 5 HOH A 37 337 130 HOH HOH . 
F 5 HOH A 38 338 121 HOH HOH . 
F 5 HOH A 39 339 78 HOH HOH . 
F 5 HOH A 40 340 12 HOH HOH . 
F 5 HOH A 41 341 95 HOH HOH . 
F 5 HOH A 42 342 55 HOH HOH . 
F 5 HOH A 43 343 34 HOH HOH . 
F 5 HOH A 44 344 213 HOH HOH . 
F 5 HOH A 45 345 191 HOH HOH . 
F 5 HOH A 46 346 22 HOH HOH . 
F 5 HOH A 47 347 134 HOH HOH . 
F 5 HOH A 48 348 71 HOH HOH . 
F 5 HOH A 49 349 50 HOH HOH . 
F 5 HOH A 50 350 64 HOH HOH . 
F 5 HOH A 51 351 16 HOH HOH . 
F 5 HOH A 52 352 114 HOH HOH . 
F 5 HOH A 53 353 27 HOH HOH . 
F 5 HOH A 54 354 211 HOH HOH . 
F 5 HOH A 55 355 131 HOH HOH . 
F 5 HOH A 56 356 60 HOH HOH . 
F 5 HOH A 57 357 116 HOH HOH . 
F 5 HOH A 58 358 25 HOH HOH . 
F 5 HOH A 59 359 197 HOH HOH . 
F 5 HOH A 60 360 133 HOH HOH . 
F 5 HOH A 61 361 125 HOH HOH . 
F 5 HOH A 62 362 2 HOH HOH . 
F 5 HOH A 63 363 102 HOH HOH . 
F 5 HOH A 64 364 143 HOH HOH . 
F 5 HOH A 65 365 220 HOH HOH . 
F 5 HOH A 66 366 51 HOH HOH . 
F 5 HOH A 67 367 36 HOH HOH . 
F 5 HOH A 68 368 227 HOH HOH . 
F 5 HOH A 69 369 161 HOH HOH . 
F 5 HOH A 70 370 24 HOH HOH . 
F 5 HOH A 71 371 108 HOH HOH . 
F 5 HOH A 72 372 127 HOH HOH . 
F 5 HOH A 73 373 106 HOH HOH . 
F 5 HOH A 74 374 28 HOH HOH . 
F 5 HOH A 75 375 142 HOH HOH . 
F 5 HOH A 76 376 46 HOH HOH . 
F 5 HOH A 77 377 94 HOH HOH . 
F 5 HOH A 78 378 132 HOH HOH . 
F 5 HOH A 79 379 41 HOH HOH . 
F 5 HOH A 80 380 63 HOH HOH . 
F 5 HOH A 81 381 98 HOH HOH . 
F 5 HOH A 82 382 219 HOH HOH . 
F 5 HOH A 83 383 68 HOH HOH . 
F 5 HOH A 84 384 200 HOH HOH . 
F 5 HOH A 85 385 203 HOH HOH . 
F 5 HOH A 86 386 40 HOH HOH . 
F 5 HOH A 87 387 171 HOH HOH . 
F 5 HOH A 88 388 212 HOH HOH . 
F 5 HOH A 89 389 228 HOH HOH . 
F 5 HOH A 90 390 217 HOH HOH . 
F 5 HOH A 91 391 59 HOH HOH . 
F 5 HOH A 92 392 156 HOH HOH . 
F 5 HOH A 93 393 96 HOH HOH . 
F 5 HOH A 94 394 173 HOH HOH . 
F 5 HOH A 95 395 154 HOH HOH . 
F 5 HOH A 96 396 190 HOH HOH . 
F 5 HOH A 97 397 233 HOH HOH . 
F 5 HOH A 98 398 198 HOH HOH . 
F 5 HOH A 99 399 168 HOH HOH . 
F 5 HOH A 100 400 118 HOH HOH . 
F 5 HOH A 101 401 83 HOH HOH . 
F 5 HOH A 102 402 181 HOH HOH . 
F 5 HOH A 103 403 207 HOH HOH . 
F 5 HOH A 104 404 189 HOH HOH . 
F 5 HOH A 105 405 172 HOH HOH . 
F 5 HOH A 106 406 158 HOH HOH . 
F 5 HOH A 107 407 164 HOH HOH . 
F 5 HOH A 108 408 174 HOH HOH . 
F 5 HOH A 109 409 209 HOH HOH . 
F 5 HOH A 110 410 199 HOH HOH . 
F 5 HOH A 111 411 93 HOH HOH . 
F 5 HOH A 112 412 179 HOH HOH . 
F 5 HOH A 113 413 170 HOH HOH . 
F 5 HOH A 114 414 187 HOH HOH . 
F 5 HOH A 115 415 208 HOH HOH . 
G 5 HOH B 1 301 26 HOH HOH . 
G 5 HOH B 2 302 128 HOH HOH . 
G 5 HOH B 3 303 166 HOH HOH . 
G 5 HOH B 4 304 120 HOH HOH . 
G 5 HOH B 5 305 109 HOH HOH . 
G 5 HOH B 6 306 178 HOH HOH . 
G 5 HOH B 7 307 231 HOH HOH . 
G 5 HOH B 8 308 160 HOH HOH . 
G 5 HOH B 9 309 79 HOH HOH . 
G 5 HOH B 10 310 101 HOH HOH . 
G 5 HOH B 11 311 232 HOH HOH . 
G 5 HOH B 12 312 201 HOH HOH . 
G 5 HOH B 13 313 129 HOH HOH . 
G 5 HOH B 14 314 184 HOH HOH . 
G 5 HOH B 15 315 65 HOH HOH . 
G 5 HOH B 16 316 3 HOH HOH . 
G 5 HOH B 17 317 45 HOH HOH . 
G 5 HOH B 18 318 115 HOH HOH . 
G 5 HOH B 19 319 31 HOH HOH . 
G 5 HOH B 20 320 140 HOH HOH . 
G 5 HOH B 21 321 107 HOH HOH . 
G 5 HOH B 22 322 39 HOH HOH . 
G 5 HOH B 23 323 43 HOH HOH . 
G 5 HOH B 24 324 58 HOH HOH . 
G 5 HOH B 25 325 229 HOH HOH . 
G 5 HOH B 26 326 99 HOH HOH . 
G 5 HOH B 27 327 73 HOH HOH . 
G 5 HOH B 28 328 82 HOH HOH . 
G 5 HOH B 29 329 13 HOH HOH . 
G 5 HOH B 30 330 47 HOH HOH . 
G 5 HOH B 31 331 163 HOH HOH . 
G 5 HOH B 32 332 152 HOH HOH . 
G 5 HOH B 33 333 111 HOH HOH . 
G 5 HOH B 34 334 138 HOH HOH . 
G 5 HOH B 35 335 69 HOH HOH . 
G 5 HOH B 36 336 57 HOH HOH . 
G 5 HOH B 37 337 18 HOH HOH . 
G 5 HOH B 38 338 89 HOH HOH . 
G 5 HOH B 39 339 151 HOH HOH . 
G 5 HOH B 40 340 124 HOH HOH . 
G 5 HOH B 41 341 225 HOH HOH . 
G 5 HOH B 42 342 104 HOH HOH . 
G 5 HOH B 43 343 155 HOH HOH . 
G 5 HOH B 44 344 80 HOH HOH . 
G 5 HOH B 45 345 61 HOH HOH . 
G 5 HOH B 46 346 74 HOH HOH . 
G 5 HOH B 47 347 32 HOH HOH . 
G 5 HOH B 48 348 139 HOH HOH . 
G 5 HOH B 49 349 20 HOH HOH . 
G 5 HOH B 50 350 91 HOH HOH . 
G 5 HOH B 51 351 123 HOH HOH . 
G 5 HOH B 52 352 37 HOH HOH . 
G 5 HOH B 53 353 137 HOH HOH . 
G 5 HOH B 54 354 38 HOH HOH . 
G 5 HOH B 55 355 84 HOH HOH . 
G 5 HOH B 56 356 218 HOH HOH . 
G 5 HOH B 57 357 159 HOH HOH . 
G 5 HOH B 58 358 44 HOH HOH . 
G 5 HOH B 59 359 144 HOH HOH . 
G 5 HOH B 60 360 35 HOH HOH . 
G 5 HOH B 61 361 136 HOH HOH . 
G 5 HOH B 62 362 49 HOH HOH . 
G 5 HOH B 63 363 162 HOH HOH . 
G 5 HOH B 64 364 193 HOH HOH . 
G 5 HOH B 65 365 215 HOH HOH . 
G 5 HOH B 66 366 72 HOH HOH . 
G 5 HOH B 67 367 75 HOH HOH . 
G 5 HOH B 68 368 54 HOH HOH . 
G 5 HOH B 69 369 223 HOH HOH . 
G 5 HOH B 70 370 76 HOH HOH . 
G 5 HOH B 71 371 87 HOH HOH . 
G 5 HOH B 72 372 214 HOH HOH . 
G 5 HOH B 73 373 110 HOH HOH . 
G 5 HOH B 74 374 81 HOH HOH . 
G 5 HOH B 75 375 90 HOH HOH . 
G 5 HOH B 76 376 192 HOH HOH . 
G 5 HOH B 77 377 157 HOH HOH . 
G 5 HOH B 78 378 196 HOH HOH . 
G 5 HOH B 79 379 234 HOH HOH . 
G 5 HOH B 80 380 177 HOH HOH . 
G 5 HOH B 81 381 175 HOH HOH . 
G 5 HOH B 82 382 206 HOH HOH . 
G 5 HOH B 83 383 48 HOH HOH . 
G 5 HOH B 84 384 169 HOH HOH . 
G 5 HOH B 85 385 180 HOH HOH . 
G 5 HOH B 86 386 182 HOH HOH . 
G 5 HOH B 87 387 216 HOH HOH . 
G 5 HOH B 88 388 165 HOH HOH . 
G 5 HOH B 89 389 167 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . D 3 16.456 -9.632 -4.483 0.5 29.96 ? C1 PEG 202 A 1 
HETATM 2 O O1 PEG . . . D 3 16.388 -8.718 -3.411 0.5 29.96 ? O1 PEG 202 A 1 
HETATM 3 C C2 PEG . . . D 3 17.503 -9.244 -5.525 0.5 29.99 ? C2 PEG 202 A 1 
HETATM 4 O O2 PEG . . . D 3 17.78 -10.341 -6.349 0.5 30.04 ? O2 PEG 202 A 1 
HETATM 5 C C3 PEG . . . D 3 18.202 -11.47 -5.601 1 30.07 ? C3 PEG 202 A 1 
HETATM 6 C C4 PEG . . . D 3 17.573 -12.769 -6.133 1 30.12 ? C4 PEG 202 A 1 
HETATM 7 O O4 PEG . . . D 3 16.734 -13.39 -5.15 1 30.12 ? O4 PEG 202 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#