data_6LSH # _model_server_result.job_id lJ3c1fqU44G7kSXC-3wJvA _model_server_result.datetime_utc '2024-11-25 15:08:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lsh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 6LSH # _exptl.entry_id 6LSH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LSH _cell.length_a 62.878 _cell.length_b 77.38 _cell.length_c 155.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LSH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 271 A HIS 271 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A NE2 HIS 273 A HIS 273 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc3 A SG CYS 282 A CYS 282 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc4 A OE2 GLU 343 A GLU 343 1_555 E ZN ZN . A ZN 502 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? hydrog WATSON-CRICK hydrog1 B N1 G 18 B G 601 1_555 C N3 C 18 C C 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 G 18 B G 601 1_555 C O2 C 18 C C 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 G 18 B G 601 1_555 C N4 C 18 C C 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N1 G 19 B G 602 1_555 C N3 C 17 C C 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N2 G 19 B G 602 1_555 C O2 C 17 C C 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O6 G 19 B G 602 1_555 C N4 C 17 C C 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N3 U 20 B U 603 1_555 C N1 A 16 C A 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O4 U 20 B U 603 1_555 C N6 A 16 C A 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N3 C 21 B C 604 1_555 C N1 G 15 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N4 C 21 B C 604 1_555 C O6 G 15 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B O2 C 21 B C 604 1_555 C N2 G 15 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N3 U 22 B U 605 1_555 C N1 A 14 C A 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B O4 U 22 B U 605 1_555 C N6 A 14 C A 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N3 C 23 B C 606 1_555 C N1 G 13 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N4 C 23 B C 606 1_555 C O6 G 13 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B O2 C 23 B C 606 1_555 C N2 G 13 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N3 U 24 B U 607 1_555 C N1 A 12 C A 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O4 U 24 B U 607 1_555 C N6 A 12 C A 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N3 C 25 B C 608 1_555 C N1 G 11 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N4 C 25 B C 608 1_555 C O6 G 11 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O2 C 25 B C 608 1_555 C N2 G 11 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N3 U 26 B U 609 1_555 C N1 A 10 C A 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B O4 U 26 B U 609 1_555 C N6 A 10 C A 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 405 n n S O2 SO4 doub 406 n n S O3 SO4 sing 407 n n S O4 SO4 sing 408 n n # _atom_sites.entry_id 6LSH _atom_sites.fract_transf_matrix[1][1] 0.015904 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 A 1 501 1 SO4 SO4 . E 5 ZN A 1 502 1 ZN ZN . F 6 HOH A 1 601 79 HOH HOH . F 6 HOH A 2 602 49 HOH HOH . F 6 HOH A 3 603 28 HOH HOH . F 6 HOH A 4 604 38 HOH HOH . F 6 HOH A 5 605 74 HOH HOH . F 6 HOH A 6 606 111 HOH HOH . F 6 HOH A 7 607 20 HOH HOH . F 6 HOH A 8 608 17 HOH HOH . F 6 HOH A 9 609 61 HOH HOH . F 6 HOH A 10 610 24 HOH HOH . F 6 HOH A 11 611 45 HOH HOH . F 6 HOH A 12 612 60 HOH HOH . F 6 HOH A 13 613 42 HOH HOH . F 6 HOH A 14 614 9 HOH HOH . F 6 HOH A 15 615 95 HOH HOH . F 6 HOH A 16 616 29 HOH HOH . F 6 HOH A 17 617 53 HOH HOH . F 6 HOH A 18 618 90 HOH HOH . F 6 HOH A 19 619 40 HOH HOH . F 6 HOH A 20 620 15 HOH HOH . F 6 HOH A 21 621 5 HOH HOH . F 6 HOH A 22 622 27 HOH HOH . F 6 HOH A 23 623 35 HOH HOH . F 6 HOH A 24 624 8 HOH HOH . F 6 HOH A 25 625 4 HOH HOH . F 6 HOH A 26 626 39 HOH HOH . F 6 HOH A 27 627 32 HOH HOH . F 6 HOH A 28 628 6 HOH HOH . F 6 HOH A 29 629 88 HOH HOH . F 6 HOH A 30 630 33 HOH HOH . F 6 HOH A 31 631 118 HOH HOH . F 6 HOH A 32 632 69 HOH HOH . F 6 HOH A 33 633 26 HOH HOH . F 6 HOH A 34 634 23 HOH HOH . F 6 HOH A 35 635 21 HOH HOH . F 6 HOH A 36 636 75 HOH HOH . F 6 HOH A 37 637 22 HOH HOH . F 6 HOH A 38 638 1 HOH HOH . F 6 HOH A 39 639 36 HOH HOH . F 6 HOH A 40 640 54 HOH HOH . F 6 HOH A 41 641 57 HOH HOH . F 6 HOH A 42 642 80 HOH HOH . F 6 HOH A 43 643 46 HOH HOH . F 6 HOH A 44 644 31 HOH HOH . F 6 HOH A 45 645 114 HOH HOH . F 6 HOH A 46 646 37 HOH HOH . F 6 HOH A 47 647 85 HOH HOH . F 6 HOH A 48 648 72 HOH HOH . F 6 HOH A 49 649 3 HOH HOH . F 6 HOH A 50 650 66 HOH HOH . F 6 HOH A 51 651 13 HOH HOH . F 6 HOH A 52 652 108 HOH HOH . F 6 HOH A 53 653 11 HOH HOH . F 6 HOH A 54 654 115 HOH HOH . F 6 HOH A 55 655 30 HOH HOH . F 6 HOH A 56 656 62 HOH HOH . F 6 HOH A 57 657 112 HOH HOH . F 6 HOH A 58 658 52 HOH HOH . F 6 HOH A 59 659 71 HOH HOH . F 6 HOH A 60 660 48 HOH HOH . F 6 HOH A 61 661 7 HOH HOH . F 6 HOH A 62 662 16 HOH HOH . F 6 HOH A 63 663 56 HOH HOH . F 6 HOH A 64 664 102 HOH HOH . F 6 HOH A 65 665 103 HOH HOH . F 6 HOH A 66 666 55 HOH HOH . F 6 HOH A 67 667 68 HOH HOH . F 6 HOH A 68 668 43 HOH HOH . F 6 HOH A 69 669 58 HOH HOH . F 6 HOH A 70 670 14 HOH HOH . F 6 HOH A 71 671 104 HOH HOH . F 6 HOH A 72 672 47 HOH HOH . F 6 HOH A 73 673 19 HOH HOH . F 6 HOH A 74 674 99 HOH HOH . F 6 HOH A 75 675 51 HOH HOH . F 6 HOH A 76 676 50 HOH HOH . F 6 HOH A 77 677 81 HOH HOH . F 6 HOH A 78 678 105 HOH HOH . F 6 HOH A 79 679 96 HOH HOH . F 6 HOH A 80 680 34 HOH HOH . F 6 HOH A 81 681 25 HOH HOH . F 6 HOH A 82 682 63 HOH HOH . F 6 HOH A 83 683 10 HOH HOH . F 6 HOH A 84 684 87 HOH HOH . F 6 HOH A 85 685 97 HOH HOH . F 6 HOH A 86 686 94 HOH HOH . F 6 HOH A 87 687 64 HOH HOH . F 6 HOH A 88 688 86 HOH HOH . F 6 HOH A 89 689 70 HOH HOH . F 6 HOH A 90 690 117 HOH HOH . F 6 HOH A 91 691 106 HOH HOH . F 6 HOH A 92 692 77 HOH HOH . F 6 HOH A 93 693 89 HOH HOH . F 6 HOH A 94 694 73 HOH HOH . F 6 HOH A 95 695 91 HOH HOH . F 6 HOH A 96 696 92 HOH HOH . F 6 HOH A 97 697 83 HOH HOH . G 6 HOH B 1 701 18 HOH HOH . G 6 HOH B 2 702 41 HOH HOH . G 6 HOH B 3 703 116 HOH HOH . G 6 HOH B 4 704 12 HOH HOH . G 6 HOH B 5 705 2 HOH HOH . G 6 HOH B 6 706 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 10.399 18.666 33.251 0.85 52.83 ? S SO4 501 A 1 HETATM 2 O O1 SO4 . . . D 4 10.834 19.883 32.6 0.85 46.84 ? O1 SO4 501 A 1 HETATM 3 O O2 SO4 . . . D 4 10.08 17.643 32.272 0.85 38.82 ? O2 SO4 501 A 1 HETATM 4 O O3 SO4 . . . D 4 11.491 18.173 34.064 0.85 57.61 ? O3 SO4 501 A 1 HETATM 5 O O4 SO4 . . . D 4 9.219 18.972 34.034 0.85 44.36 ? O4 SO4 501 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #