data_6LT6
#
_model_server_result.job_id            CO0KdGZw_Uj48VNFmw-PvA 
_model_server_result.datetime_utc      '2024-11-14 19:03:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lt6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":101}' 
#
_entry.id    6LT6 
#
_exptl.entry_id    6LT6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LT6 
_cell.length_a            54.451 
_cell.length_b            81.028 
_cell.length_c            106.108 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LT6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc1 B O HIS 85 B HIS 84 1_555 L NA NA . B NA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc2 B O LEU 88 B LEU 87 1_555 L NA NA . B NA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6LT6 
_atom_sites.fract_transf_matrix[1][1]    0.018365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012341 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009424 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EKG A 1 301 1 EKG EKG . 
D 4 EDO A 1 302 1 EDO EDO . 
E 4 EDO A 1 303 7 EDO EDO . 
F 4 EDO A 1 304 8 EDO EDO . 
G 4 EDO B 1 101 2 EDO EDO . 
H 4 EDO B 1 102 3 EDO EDO . 
I 4 EDO B 1 103 4 EDO EDO . 
J 4 EDO B 1 104 5 EDO EDO . 
K 4 EDO B 1 105 6 EDO EDO . 
L 5 NA B 1 106 1 NA NA . 
M 6 HOH A 1 401 43 HOH HOH . 
M 6 HOH A 2 402 198 HOH HOH . 
M 6 HOH A 3 403 177 HOH HOH . 
M 6 HOH A 4 404 16 HOH HOH . 
M 6 HOH A 5 405 2 HOH HOH . 
M 6 HOH A 6 406 200 HOH HOH . 
M 6 HOH A 7 407 188 HOH HOH . 
M 6 HOH A 8 408 172 HOH HOH . 
M 6 HOH A 9 409 60 HOH HOH . 
M 6 HOH A 10 410 202 HOH HOH . 
M 6 HOH A 11 411 87 HOH HOH . 
M 6 HOH A 12 412 182 HOH HOH . 
M 6 HOH A 13 413 33 HOH HOH . 
M 6 HOH A 14 414 203 HOH HOH . 
M 6 HOH A 15 415 154 HOH HOH . 
M 6 HOH A 16 416 82 HOH HOH . 
M 6 HOH A 17 417 189 HOH HOH . 
M 6 HOH A 18 418 65 HOH HOH . 
M 6 HOH A 19 419 75 HOH HOH . 
M 6 HOH A 20 420 167 HOH HOH . 
M 6 HOH A 21 421 123 HOH HOH . 
M 6 HOH A 22 422 85 HOH HOH . 
M 6 HOH A 23 423 159 HOH HOH . 
M 6 HOH A 24 424 133 HOH HOH . 
M 6 HOH A 25 425 17 HOH HOH . 
M 6 HOH A 26 426 44 HOH HOH . 
M 6 HOH A 27 427 170 HOH HOH . 
M 6 HOH A 28 428 116 HOH HOH . 
M 6 HOH A 29 429 150 HOH HOH . 
M 6 HOH A 30 430 107 HOH HOH . 
M 6 HOH A 31 431 35 HOH HOH . 
M 6 HOH A 32 432 32 HOH HOH . 
M 6 HOH A 33 433 180 HOH HOH . 
M 6 HOH A 34 434 1 HOH HOH . 
M 6 HOH A 35 435 89 HOH HOH . 
M 6 HOH A 36 436 31 HOH HOH . 
M 6 HOH A 37 437 22 HOH HOH . 
M 6 HOH A 38 438 36 HOH HOH . 
M 6 HOH A 39 439 140 HOH HOH . 
M 6 HOH A 40 440 13 HOH HOH . 
M 6 HOH A 41 441 190 HOH HOH . 
M 6 HOH A 42 442 155 HOH HOH . 
M 6 HOH A 43 443 106 HOH HOH . 
M 6 HOH A 44 444 49 HOH HOH . 
M 6 HOH A 45 445 66 HOH HOH . 
M 6 HOH A 46 446 88 HOH HOH . 
M 6 HOH A 47 447 146 HOH HOH . 
M 6 HOH A 48 448 152 HOH HOH . 
M 6 HOH A 49 449 101 HOH HOH . 
M 6 HOH A 50 450 102 HOH HOH . 
M 6 HOH A 51 451 193 HOH HOH . 
M 6 HOH A 52 452 69 HOH HOH . 
M 6 HOH A 53 453 158 HOH HOH . 
M 6 HOH A 54 454 165 HOH HOH . 
M 6 HOH A 55 455 62 HOH HOH . 
M 6 HOH A 56 456 24 HOH HOH . 
M 6 HOH A 57 457 47 HOH HOH . 
M 6 HOH A 58 458 197 HOH HOH . 
M 6 HOH A 59 459 194 HOH HOH . 
M 6 HOH A 60 460 18 HOH HOH . 
M 6 HOH A 61 461 137 HOH HOH . 
M 6 HOH A 62 462 3 HOH HOH . 
M 6 HOH A 63 463 149 HOH HOH . 
M 6 HOH A 64 464 179 HOH HOH . 
M 6 HOH A 65 465 72 HOH HOH . 
M 6 HOH A 66 466 51 HOH HOH . 
M 6 HOH A 67 467 14 HOH HOH . 
M 6 HOH A 68 468 131 HOH HOH . 
M 6 HOH A 69 469 141 HOH HOH . 
M 6 HOH A 70 470 136 HOH HOH . 
M 6 HOH A 71 471 55 HOH HOH . 
M 6 HOH A 72 472 100 HOH HOH . 
M 6 HOH A 73 473 7 HOH HOH . 
M 6 HOH A 74 474 48 HOH HOH . 
M 6 HOH A 75 475 135 HOH HOH . 
M 6 HOH A 76 476 27 HOH HOH . 
M 6 HOH A 77 477 86 HOH HOH . 
M 6 HOH A 78 478 164 HOH HOH . 
M 6 HOH A 79 479 53 HOH HOH . 
M 6 HOH A 80 480 52 HOH HOH . 
M 6 HOH A 81 481 147 HOH HOH . 
M 6 HOH A 82 482 206 HOH HOH . 
M 6 HOH A 83 483 38 HOH HOH . 
M 6 HOH A 84 484 80 HOH HOH . 
M 6 HOH A 85 485 77 HOH HOH . 
M 6 HOH A 86 486 122 HOH HOH . 
M 6 HOH A 87 487 95 HOH HOH . 
M 6 HOH A 88 488 64 HOH HOH . 
M 6 HOH A 89 489 28 HOH HOH . 
M 6 HOH A 90 490 117 HOH HOH . 
M 6 HOH A 91 491 124 HOH HOH . 
M 6 HOH A 92 492 126 HOH HOH . 
M 6 HOH A 93 493 121 HOH HOH . 
M 6 HOH A 94 494 110 HOH HOH . 
M 6 HOH A 95 495 120 HOH HOH . 
M 6 HOH A 96 496 181 HOH HOH . 
M 6 HOH A 97 497 92 HOH HOH . 
M 6 HOH A 98 498 39 HOH HOH . 
M 6 HOH A 99 499 83 HOH HOH . 
M 6 HOH A 100 500 42 HOH HOH . 
M 6 HOH A 101 501 91 HOH HOH . 
M 6 HOH A 102 502 138 HOH HOH . 
M 6 HOH A 103 503 166 HOH HOH . 
M 6 HOH A 104 504 97 HOH HOH . 
M 6 HOH A 105 505 161 HOH HOH . 
M 6 HOH A 106 506 58 HOH HOH . 
M 6 HOH A 107 507 8 HOH HOH . 
M 6 HOH A 108 508 20 HOH HOH . 
M 6 HOH A 109 509 127 HOH HOH . 
M 6 HOH A 110 510 163 HOH HOH . 
M 6 HOH A 111 511 56 HOH HOH . 
M 6 HOH A 112 512 118 HOH HOH . 
M 6 HOH A 113 513 115 HOH HOH . 
M 6 HOH A 114 514 23 HOH HOH . 
M 6 HOH A 115 515 187 HOH HOH . 
M 6 HOH A 116 516 207 HOH HOH . 
M 6 HOH A 117 517 157 HOH HOH . 
M 6 HOH A 118 518 128 HOH HOH . 
M 6 HOH A 119 519 94 HOH HOH . 
M 6 HOH A 120 520 19 HOH HOH . 
M 6 HOH A 121 521 185 HOH HOH . 
M 6 HOH A 122 522 184 HOH HOH . 
M 6 HOH A 123 523 192 HOH HOH . 
M 6 HOH A 124 524 105 HOH HOH . 
M 6 HOH A 125 525 183 HOH HOH . 
M 6 HOH A 126 526 114 HOH HOH . 
M 6 HOH A 127 527 204 HOH HOH . 
M 6 HOH A 128 528 68 HOH HOH . 
M 6 HOH A 129 529 125 HOH HOH . 
M 6 HOH A 130 530 174 HOH HOH . 
M 6 HOH A 131 531 199 HOH HOH . 
M 6 HOH A 132 532 156 HOH HOH . 
M 6 HOH A 133 533 186 HOH HOH . 
M 6 HOH A 134 534 171 HOH HOH . 
M 6 HOH A 135 535 143 HOH HOH . 
N 6 HOH B 1 201 191 HOH HOH . 
N 6 HOH B 2 202 151 HOH HOH . 
N 6 HOH B 3 203 54 HOH HOH . 
N 6 HOH B 4 204 79 HOH HOH . 
N 6 HOH B 5 205 78 HOH HOH . 
N 6 HOH B 6 206 208 HOH HOH . 
N 6 HOH B 7 207 109 HOH HOH . 
N 6 HOH B 8 208 73 HOH HOH . 
N 6 HOH B 9 209 111 HOH HOH . 
N 6 HOH B 10 210 74 HOH HOH . 
N 6 HOH B 11 211 130 HOH HOH . 
N 6 HOH B 12 212 153 HOH HOH . 
N 6 HOH B 13 213 173 HOH HOH . 
N 6 HOH B 14 214 12 HOH HOH . 
N 6 HOH B 15 215 160 HOH HOH . 
N 6 HOH B 16 216 34 HOH HOH . 
N 6 HOH B 17 217 50 HOH HOH . 
N 6 HOH B 18 218 30 HOH HOH . 
N 6 HOH B 19 219 26 HOH HOH . 
N 6 HOH B 20 220 144 HOH HOH . 
N 6 HOH B 21 221 104 HOH HOH . 
N 6 HOH B 22 222 132 HOH HOH . 
N 6 HOH B 23 223 25 HOH HOH . 
N 6 HOH B 24 224 84 HOH HOH . 
N 6 HOH B 25 225 205 HOH HOH . 
N 6 HOH B 26 226 70 HOH HOH . 
N 6 HOH B 27 227 103 HOH HOH . 
N 6 HOH B 28 228 142 HOH HOH . 
N 6 HOH B 29 229 93 HOH HOH . 
N 6 HOH B 30 230 112 HOH HOH . 
N 6 HOH B 31 231 81 HOH HOH . 
N 6 HOH B 32 232 6 HOH HOH . 
N 6 HOH B 33 233 178 HOH HOH . 
N 6 HOH B 34 234 76 HOH HOH . 
N 6 HOH B 35 235 5 HOH HOH . 
N 6 HOH B 36 236 10 HOH HOH . 
N 6 HOH B 37 237 162 HOH HOH . 
N 6 HOH B 38 238 15 HOH HOH . 
N 6 HOH B 39 239 113 HOH HOH . 
N 6 HOH B 40 240 139 HOH HOH . 
N 6 HOH B 41 241 96 HOH HOH . 
N 6 HOH B 42 242 61 HOH HOH . 
N 6 HOH B 43 243 9 HOH HOH . 
N 6 HOH B 44 244 21 HOH HOH . 
N 6 HOH B 45 245 169 HOH HOH . 
N 6 HOH B 46 246 99 HOH HOH . 
N 6 HOH B 47 247 168 HOH HOH . 
N 6 HOH B 48 248 57 HOH HOH . 
N 6 HOH B 49 249 4 HOH HOH . 
N 6 HOH B 50 250 40 HOH HOH . 
N 6 HOH B 51 251 98 HOH HOH . 
N 6 HOH B 52 252 134 HOH HOH . 
N 6 HOH B 53 253 29 HOH HOH . 
N 6 HOH B 54 254 67 HOH HOH . 
N 6 HOH B 55 255 11 HOH HOH . 
N 6 HOH B 56 256 46 HOH HOH . 
N 6 HOH B 57 257 90 HOH HOH . 
N 6 HOH B 58 258 129 HOH HOH . 
N 6 HOH B 59 259 37 HOH HOH . 
N 6 HOH B 60 260 59 HOH HOH . 
N 6 HOH B 61 261 41 HOH HOH . 
N 6 HOH B 62 262 71 HOH HOH . 
N 6 HOH B 63 263 119 HOH HOH . 
N 6 HOH B 64 264 145 HOH HOH . 
N 6 HOH B 65 265 195 HOH HOH . 
N 6 HOH B 66 266 45 HOH HOH . 
N 6 HOH B 67 267 176 HOH HOH . 
N 6 HOH B 68 268 148 HOH HOH . 
N 6 HOH B 69 269 196 HOH HOH . 
N 6 HOH B 70 270 63 HOH HOH . 
N 6 HOH B 71 271 108 HOH HOH . 
N 6 HOH B 72 272 175 HOH HOH . 
N 6 HOH B 73 273 201 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 4 -13.027 20.217 -18.75 1 35.82 ? C1 EDO 101 B 1 
HETATM 2 O O1 EDO . . . G 4 -12.228 21.23 -18.107 1 48.92 ? O1 EDO 101 B 1 
HETATM 3 C C2 EDO . . . G 4 -12.793 18.775 -18.261 1 37.7 ? C2 EDO 101 B 1 
HETATM 4 O O2 EDO . . . G 4 -13.125 18.566 -16.869 1 36.04 ? O2 EDO 101 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           397 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
#