data_6LT6 # _model_server_result.job_id Miu4qHdcglmCgj3EXq-CQQ _model_server_result.datetime_utc '2024-11-14 19:12:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lt6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":102}' # _entry.id 6LT6 # _exptl.entry_id 6LT6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LT6 _cell.length_a 54.451 _cell.length_b 81.028 _cell.length_c 106.108 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc1 B O HIS 85 B HIS 84 1_555 L NA NA . B NA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc2 B O LEU 88 B LEU 87 1_555 L NA NA . B NA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6LT6 _atom_sites.fract_transf_matrix[1][1] 0.018365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012341 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EKG A 1 301 1 EKG EKG . D 4 EDO A 1 302 1 EDO EDO . E 4 EDO A 1 303 7 EDO EDO . F 4 EDO A 1 304 8 EDO EDO . G 4 EDO B 1 101 2 EDO EDO . H 4 EDO B 1 102 3 EDO EDO . I 4 EDO B 1 103 4 EDO EDO . J 4 EDO B 1 104 5 EDO EDO . K 4 EDO B 1 105 6 EDO EDO . L 5 NA B 1 106 1 NA NA . M 6 HOH A 1 401 43 HOH HOH . M 6 HOH A 2 402 198 HOH HOH . M 6 HOH A 3 403 177 HOH HOH . M 6 HOH A 4 404 16 HOH HOH . M 6 HOH A 5 405 2 HOH HOH . M 6 HOH A 6 406 200 HOH HOH . M 6 HOH A 7 407 188 HOH HOH . M 6 HOH A 8 408 172 HOH HOH . M 6 HOH A 9 409 60 HOH HOH . M 6 HOH A 10 410 202 HOH HOH . M 6 HOH A 11 411 87 HOH HOH . M 6 HOH A 12 412 182 HOH HOH . M 6 HOH A 13 413 33 HOH HOH . M 6 HOH A 14 414 203 HOH HOH . M 6 HOH A 15 415 154 HOH HOH . M 6 HOH A 16 416 82 HOH HOH . M 6 HOH A 17 417 189 HOH HOH . M 6 HOH A 18 418 65 HOH HOH . M 6 HOH A 19 419 75 HOH HOH . M 6 HOH A 20 420 167 HOH HOH . M 6 HOH A 21 421 123 HOH HOH . M 6 HOH A 22 422 85 HOH HOH . M 6 HOH A 23 423 159 HOH HOH . M 6 HOH A 24 424 133 HOH HOH . M 6 HOH A 25 425 17 HOH HOH . M 6 HOH A 26 426 44 HOH HOH . M 6 HOH A 27 427 170 HOH HOH . M 6 HOH A 28 428 116 HOH HOH . M 6 HOH A 29 429 150 HOH HOH . M 6 HOH A 30 430 107 HOH HOH . M 6 HOH A 31 431 35 HOH HOH . M 6 HOH A 32 432 32 HOH HOH . M 6 HOH A 33 433 180 HOH HOH . M 6 HOH A 34 434 1 HOH HOH . M 6 HOH A 35 435 89 HOH HOH . M 6 HOH A 36 436 31 HOH HOH . M 6 HOH A 37 437 22 HOH HOH . M 6 HOH A 38 438 36 HOH HOH . M 6 HOH A 39 439 140 HOH HOH . M 6 HOH A 40 440 13 HOH HOH . M 6 HOH A 41 441 190 HOH HOH . M 6 HOH A 42 442 155 HOH HOH . M 6 HOH A 43 443 106 HOH HOH . M 6 HOH A 44 444 49 HOH HOH . M 6 HOH A 45 445 66 HOH HOH . M 6 HOH A 46 446 88 HOH HOH . M 6 HOH A 47 447 146 HOH HOH . M 6 HOH A 48 448 152 HOH HOH . M 6 HOH A 49 449 101 HOH HOH . M 6 HOH A 50 450 102 HOH HOH . M 6 HOH A 51 451 193 HOH HOH . M 6 HOH A 52 452 69 HOH HOH . M 6 HOH A 53 453 158 HOH HOH . M 6 HOH A 54 454 165 HOH HOH . M 6 HOH A 55 455 62 HOH HOH . M 6 HOH A 56 456 24 HOH HOH . M 6 HOH A 57 457 47 HOH HOH . M 6 HOH A 58 458 197 HOH HOH . M 6 HOH A 59 459 194 HOH HOH . M 6 HOH A 60 460 18 HOH HOH . M 6 HOH A 61 461 137 HOH HOH . M 6 HOH A 62 462 3 HOH HOH . M 6 HOH A 63 463 149 HOH HOH . M 6 HOH A 64 464 179 HOH HOH . M 6 HOH A 65 465 72 HOH HOH . M 6 HOH A 66 466 51 HOH HOH . M 6 HOH A 67 467 14 HOH HOH . M 6 HOH A 68 468 131 HOH HOH . M 6 HOH A 69 469 141 HOH HOH . M 6 HOH A 70 470 136 HOH HOH . M 6 HOH A 71 471 55 HOH HOH . M 6 HOH A 72 472 100 HOH HOH . M 6 HOH A 73 473 7 HOH HOH . M 6 HOH A 74 474 48 HOH HOH . M 6 HOH A 75 475 135 HOH HOH . M 6 HOH A 76 476 27 HOH HOH . M 6 HOH A 77 477 86 HOH HOH . M 6 HOH A 78 478 164 HOH HOH . M 6 HOH A 79 479 53 HOH HOH . M 6 HOH A 80 480 52 HOH HOH . M 6 HOH A 81 481 147 HOH HOH . M 6 HOH A 82 482 206 HOH HOH . M 6 HOH A 83 483 38 HOH HOH . M 6 HOH A 84 484 80 HOH HOH . M 6 HOH A 85 485 77 HOH HOH . M 6 HOH A 86 486 122 HOH HOH . M 6 HOH A 87 487 95 HOH HOH . M 6 HOH A 88 488 64 HOH HOH . M 6 HOH A 89 489 28 HOH HOH . M 6 HOH A 90 490 117 HOH HOH . M 6 HOH A 91 491 124 HOH HOH . M 6 HOH A 92 492 126 HOH HOH . M 6 HOH A 93 493 121 HOH HOH . M 6 HOH A 94 494 110 HOH HOH . M 6 HOH A 95 495 120 HOH HOH . M 6 HOH A 96 496 181 HOH HOH . M 6 HOH A 97 497 92 HOH HOH . M 6 HOH A 98 498 39 HOH HOH . M 6 HOH A 99 499 83 HOH HOH . M 6 HOH A 100 500 42 HOH HOH . M 6 HOH A 101 501 91 HOH HOH . M 6 HOH A 102 502 138 HOH HOH . M 6 HOH A 103 503 166 HOH HOH . M 6 HOH A 104 504 97 HOH HOH . M 6 HOH A 105 505 161 HOH HOH . M 6 HOH A 106 506 58 HOH HOH . M 6 HOH A 107 507 8 HOH HOH . M 6 HOH A 108 508 20 HOH HOH . M 6 HOH A 109 509 127 HOH HOH . M 6 HOH A 110 510 163 HOH HOH . M 6 HOH A 111 511 56 HOH HOH . M 6 HOH A 112 512 118 HOH HOH . M 6 HOH A 113 513 115 HOH HOH . M 6 HOH A 114 514 23 HOH HOH . M 6 HOH A 115 515 187 HOH HOH . M 6 HOH A 116 516 207 HOH HOH . M 6 HOH A 117 517 157 HOH HOH . M 6 HOH A 118 518 128 HOH HOH . M 6 HOH A 119 519 94 HOH HOH . M 6 HOH A 120 520 19 HOH HOH . M 6 HOH A 121 521 185 HOH HOH . M 6 HOH A 122 522 184 HOH HOH . M 6 HOH A 123 523 192 HOH HOH . M 6 HOH A 124 524 105 HOH HOH . M 6 HOH A 125 525 183 HOH HOH . M 6 HOH A 126 526 114 HOH HOH . M 6 HOH A 127 527 204 HOH HOH . M 6 HOH A 128 528 68 HOH HOH . M 6 HOH A 129 529 125 HOH HOH . M 6 HOH A 130 530 174 HOH HOH . M 6 HOH A 131 531 199 HOH HOH . M 6 HOH A 132 532 156 HOH HOH . M 6 HOH A 133 533 186 HOH HOH . M 6 HOH A 134 534 171 HOH HOH . M 6 HOH A 135 535 143 HOH HOH . N 6 HOH B 1 201 191 HOH HOH . N 6 HOH B 2 202 151 HOH HOH . N 6 HOH B 3 203 54 HOH HOH . N 6 HOH B 4 204 79 HOH HOH . N 6 HOH B 5 205 78 HOH HOH . N 6 HOH B 6 206 208 HOH HOH . N 6 HOH B 7 207 109 HOH HOH . N 6 HOH B 8 208 73 HOH HOH . N 6 HOH B 9 209 111 HOH HOH . N 6 HOH B 10 210 74 HOH HOH . N 6 HOH B 11 211 130 HOH HOH . N 6 HOH B 12 212 153 HOH HOH . N 6 HOH B 13 213 173 HOH HOH . N 6 HOH B 14 214 12 HOH HOH . N 6 HOH B 15 215 160 HOH HOH . N 6 HOH B 16 216 34 HOH HOH . N 6 HOH B 17 217 50 HOH HOH . N 6 HOH B 18 218 30 HOH HOH . N 6 HOH B 19 219 26 HOH HOH . N 6 HOH B 20 220 144 HOH HOH . N 6 HOH B 21 221 104 HOH HOH . N 6 HOH B 22 222 132 HOH HOH . N 6 HOH B 23 223 25 HOH HOH . N 6 HOH B 24 224 84 HOH HOH . N 6 HOH B 25 225 205 HOH HOH . N 6 HOH B 26 226 70 HOH HOH . N 6 HOH B 27 227 103 HOH HOH . N 6 HOH B 28 228 142 HOH HOH . N 6 HOH B 29 229 93 HOH HOH . N 6 HOH B 30 230 112 HOH HOH . N 6 HOH B 31 231 81 HOH HOH . N 6 HOH B 32 232 6 HOH HOH . N 6 HOH B 33 233 178 HOH HOH . N 6 HOH B 34 234 76 HOH HOH . N 6 HOH B 35 235 5 HOH HOH . N 6 HOH B 36 236 10 HOH HOH . N 6 HOH B 37 237 162 HOH HOH . N 6 HOH B 38 238 15 HOH HOH . N 6 HOH B 39 239 113 HOH HOH . N 6 HOH B 40 240 139 HOH HOH . N 6 HOH B 41 241 96 HOH HOH . N 6 HOH B 42 242 61 HOH HOH . N 6 HOH B 43 243 9 HOH HOH . N 6 HOH B 44 244 21 HOH HOH . N 6 HOH B 45 245 169 HOH HOH . N 6 HOH B 46 246 99 HOH HOH . N 6 HOH B 47 247 168 HOH HOH . N 6 HOH B 48 248 57 HOH HOH . N 6 HOH B 49 249 4 HOH HOH . N 6 HOH B 50 250 40 HOH HOH . N 6 HOH B 51 251 98 HOH HOH . N 6 HOH B 52 252 134 HOH HOH . N 6 HOH B 53 253 29 HOH HOH . N 6 HOH B 54 254 67 HOH HOH . N 6 HOH B 55 255 11 HOH HOH . N 6 HOH B 56 256 46 HOH HOH . N 6 HOH B 57 257 90 HOH HOH . N 6 HOH B 58 258 129 HOH HOH . N 6 HOH B 59 259 37 HOH HOH . N 6 HOH B 60 260 59 HOH HOH . N 6 HOH B 61 261 41 HOH HOH . N 6 HOH B 62 262 71 HOH HOH . N 6 HOH B 63 263 119 HOH HOH . N 6 HOH B 64 264 145 HOH HOH . N 6 HOH B 65 265 195 HOH HOH . N 6 HOH B 66 266 45 HOH HOH . N 6 HOH B 67 267 176 HOH HOH . N 6 HOH B 68 268 148 HOH HOH . N 6 HOH B 69 269 196 HOH HOH . N 6 HOH B 70 270 63 HOH HOH . N 6 HOH B 71 271 108 HOH HOH . N 6 HOH B 72 272 175 HOH HOH . N 6 HOH B 73 273 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 4 -6.069 21.73 -21.213 1 45.7 ? C1 EDO 102 B 1 HETATM 2 O O1 EDO . . . H 4 -6.059 20.304 -21.416 1 35.28 ? O1 EDO 102 B 1 HETATM 3 C C2 EDO . . . H 4 -5.605 22.158 -19.812 1 32.89 ? C2 EDO 102 B 1 HETATM 4 O O2 EDO . . . H 4 -4.202 21.916 -19.653 1 36.71 ? O2 EDO 102 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 610 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #