data_6LUD # _model_server_result.job_id zyBozK4eI69oTVpEFCzYuw _model_server_result.datetime_utc '2025-02-17 10:23:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6LUD # _exptl.entry_id 6LUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 499.607 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LUD _cell.length_a 143.932 _cell.length_b 143.932 _cell.length_c 143.932 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H33 N7 O2' _chem_comp.formula_weight 499.607 _chem_comp.id YY3 _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Osimertinib;AZD 9291' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 N2 YY3 sing 376 n n N2 C11 YY3 sing 377 n n N2 C12 YY3 sing 378 n n C10 C11 YY3 sing 379 n n C10 N1 YY3 sing 380 n n C28 N1 YY3 sing 381 n n N1 C2 YY3 sing 382 n n C14 O1 YY3 sing 383 n n C3 C2 YY3 doub 384 n y C3 C4 YY3 sing 385 n y C2 C1 YY3 sing 386 n y O1 C4 YY3 sing 387 n n C4 C5 YY3 doub 388 n y C1 N YY3 sing 389 n n C1 C6 YY3 doub 390 n y N C7 YY3 sing 391 n n C7 C8 YY3 sing 392 n n C7 O YY3 doub 393 n n C5 C6 YY3 sing 394 n y C5 N3 YY3 sing 395 n n C8 C9 YY3 doub 396 n n N3 C15 YY3 sing 397 n n C15 N5 YY3 doub 398 n y C15 N4 YY3 sing 399 n y C24 C25 YY3 doub 400 n y C24 C23 YY3 sing 401 n y N5 C18 YY3 sing 402 n y N4 C16 YY3 doub 403 n y C25 C26 YY3 sing 404 n y C23 C22 YY3 doub 405 n y C18 C19 YY3 sing 406 n n C18 C17 YY3 doub 407 n y C26 C19 YY3 sing 408 n y C26 C21 YY3 doub 409 n y C16 C17 YY3 sing 410 n y C19 C20 YY3 doub 411 n y C22 C21 YY3 sing 412 n y C21 N6 YY3 sing 413 n y C20 N6 YY3 sing 414 n y N6 C27 YY3 sing 415 n n C13 H1 YY3 sing 416 n n C13 H2 YY3 sing 417 n n C13 H3 YY3 sing 418 n n C12 H5 YY3 sing 419 n n C12 H6 YY3 sing 420 n n C12 H7 YY3 sing 421 n n C11 H8 YY3 sing 422 n n C11 H9 YY3 sing 423 n n C10 H10 YY3 sing 424 n n C10 H11 YY3 sing 425 n n C28 H12 YY3 sing 426 n n C28 H13 YY3 sing 427 n n C28 H14 YY3 sing 428 n n C3 H15 YY3 sing 429 n n C14 H16 YY3 sing 430 n n C14 H17 YY3 sing 431 n n C14 H18 YY3 sing 432 n n N H19 YY3 sing 433 n n C8 H20 YY3 sing 434 n n C9 H22 YY3 sing 435 n n C9 H23 YY3 sing 436 n n C6 H25 YY3 sing 437 n n N3 H26 YY3 sing 438 n n C16 H27 YY3 sing 439 n n C17 H28 YY3 sing 440 n n C25 H29 YY3 sing 441 n n C24 H30 YY3 sing 442 n n C23 H31 YY3 sing 443 n n C22 H32 YY3 sing 444 n n C27 H33 YY3 sing 445 n n C27 H34 YY3 sing 446 n n C27 H35 YY3 sing 447 n n C20 H36 YY3 sing 448 n n # _atom_sites.entry_id 6LUD _atom_sites.fract_transf_matrix[1][1] 0.006948 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YY3 A 1 1101 1101 YY3 MOL . C 3 HOH A 1 1201 34 HOH HOH . C 3 HOH A 2 1202 10 HOH HOH . C 3 HOH A 3 1203 12 HOH HOH . C 3 HOH A 4 1204 54 HOH HOH . C 3 HOH A 5 1205 36 HOH HOH . C 3 HOH A 6 1206 62 HOH HOH . C 3 HOH A 7 1207 53 HOH HOH . C 3 HOH A 8 1208 38 HOH HOH . C 3 HOH A 9 1209 32 HOH HOH . C 3 HOH A 10 1210 23 HOH HOH . C 3 HOH A 11 1211 22 HOH HOH . C 3 HOH A 12 1212 8 HOH HOH . C 3 HOH A 13 1213 19 HOH HOH . C 3 HOH A 14 1214 24 HOH HOH . C 3 HOH A 15 1215 21 HOH HOH . C 3 HOH A 16 1216 40 HOH HOH . C 3 HOH A 17 1217 4 HOH HOH . C 3 HOH A 18 1218 63 HOH HOH . C 3 HOH A 19 1219 18 HOH HOH . C 3 HOH A 20 1220 14 HOH HOH . C 3 HOH A 21 1221 7 HOH HOH . C 3 HOH A 22 1222 27 HOH HOH . C 3 HOH A 23 1223 15 HOH HOH . C 3 HOH A 24 1224 9 HOH HOH . C 3 HOH A 25 1225 1 HOH HOH . C 3 HOH A 26 1226 26 HOH HOH . C 3 HOH A 27 1227 11 HOH HOH . C 3 HOH A 28 1228 51 HOH HOH . C 3 HOH A 29 1229 13 HOH HOH . C 3 HOH A 30 1230 29 HOH HOH . C 3 HOH A 31 1231 64 HOH HOH . C 3 HOH A 32 1232 3 HOH HOH . C 3 HOH A 33 1233 6 HOH HOH . C 3 HOH A 34 1234 25 HOH HOH . C 3 HOH A 35 1235 30 HOH HOH . C 3 HOH A 36 1236 33 HOH HOH . C 3 HOH A 37 1237 42 HOH HOH . C 3 HOH A 38 1238 31 HOH HOH . C 3 HOH A 39 1239 17 HOH HOH . C 3 HOH A 40 1240 56 HOH HOH . C 3 HOH A 41 1241 52 HOH HOH . C 3 HOH A 42 1242 20 HOH HOH . C 3 HOH A 43 1243 39 HOH HOH . C 3 HOH A 44 1244 28 HOH HOH . C 3 HOH A 45 1245 43 HOH HOH . C 3 HOH A 46 1246 59 HOH HOH . C 3 HOH A 47 1247 48 HOH HOH . C 3 HOH A 48 1248 47 HOH HOH . C 3 HOH A 49 1249 55 HOH HOH . C 3 HOH A 50 1250 57 HOH HOH . C 3 HOH A 51 1251 35 HOH HOH . C 3 HOH A 52 1252 44 HOH HOH . C 3 HOH A 53 1253 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 YY3 . . . B 2 -48.818 -2.761 -11.176 1 69.43 ? C13 YY3 1101 A 1 HETATM 2 N N2 YY3 . . . B 2 -48.491 -2.14 -12.46 1 72.63 ? N2 YY3 1101 A 1 HETATM 3 C C12 YY3 . . . B 2 -47.918 -3.133 -13.366 1 66.73 ? C12 YY3 1101 A 1 HETATM 4 C C11 YY3 . . . B 2 -49.671 -1.503 -13.052 1 67.06 ? C11 YY3 1101 A 1 HETATM 5 C C10 YY3 . . . B 2 -49.581 0.015 -13.068 1 63.77 ? C10 YY3 1101 A 1 HETATM 6 N N1 YY3 . . . B 2 -48.77 0.516 -14.183 1 64.47 ? N1 YY3 1101 A 1 HETATM 7 C C28 YY3 . . . B 2 -47.719 1.459 -13.816 1 63.86 ? C28 YY3 1101 A 1 HETATM 8 C C3 YY3 . . . B 2 -50.411 2.059 -15.176 1 56.77 ? C3 YY3 1101 A 1 HETATM 9 C C4 YY3 . . . B 2 -51.225 2.416 -16.241 1 52.07 ? C4 YY3 1101 A 1 HETATM 10 O O1 YY3 . . . B 2 -52.03 3.518 -16.261 1 51.62 ? O1 YY3 1101 A 1 HETATM 11 C C14 YY3 . . . B 2 -51.988 4.386 -15.132 1 50.71 ? C14 YY3 1101 A 1 HETATM 12 C C2 YY3 . . . B 2 -49.617 0.916 -15.265 1 57.87 ? C2 YY3 1101 A 1 HETATM 13 C C1 YY3 . . . B 2 -49.652 0.118 -16.416 1 57.13 ? C1 YY3 1101 A 1 HETATM 14 N N YY3 . . . B 2 -48.824 -1.033 -16.47 1 57.45 ? N YY3 1101 A 1 HETATM 15 C C7 YY3 . . . B 2 -49.062 -2.215 -17.091 1 61.09 ? C7 YY3 1101 A 1 HETATM 16 O O YY3 . . . B 2 -50.147 -2.487 -17.634 1 62.65 ? O YY3 1101 A 1 HETATM 17 C C8 YY3 . . . B 2 -47.919 -3.159 -17.084 1 63.79 ? C8 YY3 1101 A 1 HETATM 18 C C9 YY3 . . . B 2 -47.977 -4.333 -17.686 1 64.26 ? C9 YY3 1101 A 1 HETATM 19 C C6 YY3 . . . B 2 -50.468 0.493 -17.481 1 52.77 ? C6 YY3 1101 A 1 HETATM 20 C C5 YY3 . . . B 2 -51.233 1.656 -17.423 1 50.83 ? C5 YY3 1101 A 1 HETATM 21 N N3 YY3 . . . B 2 -52.126 2.005 -18.461 1 46.67 ? N3 YY3 1101 A 1 HETATM 22 C C15 YY3 . . . B 2 -52.174 1.742 -19.804 1 47.05 ? C15 YY3 1101 A 1 HETATM 23 N N5 YY3 . . . B 2 -51.139 1.094 -20.374 1 46.95 ? N5 YY3 1101 A 1 HETATM 24 N N4 YY3 . . . B 2 -53.272 2.196 -20.436 1 45.58 ? N4 YY3 1101 A 1 HETATM 25 C C16 YY3 . . . B 2 -53.312 1.96 -21.757 1 44.63 ? C16 YY3 1101 A 1 HETATM 26 C C17 YY3 . . . B 2 -52.31 1.307 -22.446 1 47.85 ? C17 YY3 1101 A 1 HETATM 27 C C18 YY3 . . . B 2 -51.22 0.887 -21.696 1 50.13 ? C18 YY3 1101 A 1 HETATM 28 C C19 YY3 . . . B 2 -50.088 0.174 -22.311 1 55.51 ? C19 YY3 1101 A 1 HETATM 29 C C26 YY3 . . . B 2 -48.89 -0.307 -21.632 1 55.01 ? C26 YY3 1101 A 1 HETATM 30 C C25 YY3 . . . B 2 -48.438 -0.282 -20.315 1 58.66 ? C25 YY3 1101 A 1 HETATM 31 C C24 YY3 . . . B 2 -47.214 -0.855 -19.998 1 61.71 ? C24 YY3 1101 A 1 HETATM 32 C C23 YY3 . . . B 2 -46.435 -1.449 -20.981 1 63.3 ? C23 YY3 1101 A 1 HETATM 33 C C22 YY3 . . . B 2 -46.862 -1.483 -22.301 1 63.37 ? C22 YY3 1101 A 1 HETATM 34 C C21 YY3 . . . B 2 -48.091 -0.913 -22.611 1 56.86 ? C21 YY3 1101 A 1 HETATM 35 N N6 YY3 . . . B 2 -48.75 -0.823 -23.816 1 60.84 ? N6 YY3 1101 A 1 HETATM 36 C C27 YY3 . . . B 2 -48.252 -1.317 -25.094 1 62.51 ? C27 YY3 1101 A 1 HETATM 37 C C20 YY3 . . . B 2 -49.938 -0.166 -23.622 1 56.23 ? C20 YY3 1101 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #