data_6LV1 # _model_server_result.job_id J_zOe3M44dwLDoO-leHqYA _model_server_result.datetime_utc '2024-11-05 01:28:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6LV1 # _exptl.entry_id 6LV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.157 _cell.angle_gamma 90 _cell.entry_id 6LV1 _cell.length_a 42.305 _cell.length_b 41.224 _cell.length_c 72.047 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc4 C CO CO . A CO 302 1_555 D O1 BCT . A BCT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 C CO CO . A CO 302 1_555 D O3 BCT . A BCT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6LV1 _atom_sites.fract_transf_matrix[1][1] 0.023638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005962 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 302 GOL GOL . C 3 CO A 1 302 1 CO CO . D 4 BCT A 1 303 1 BCT BCT . E 5 HOH A 1 401 401 HOH HOH . E 5 HOH A 2 402 402 HOH HOH . E 5 HOH A 3 403 403 HOH HOH . E 5 HOH A 4 404 20 HOH HOH . E 5 HOH A 5 405 404 HOH HOH . E 5 HOH A 6 406 406 HOH HOH . E 5 HOH A 7 407 412 HOH HOH . E 5 HOH A 8 408 411 HOH HOH . E 5 HOH A 9 409 445 HOH HOH . E 5 HOH A 10 410 417 HOH HOH . E 5 HOH A 11 411 485 HOH HOH . E 5 HOH A 12 412 7 HOH HOH . E 5 HOH A 13 413 490 HOH HOH . E 5 HOH A 14 414 570 HOH HOH . E 5 HOH A 15 415 424 HOH HOH . E 5 HOH A 16 416 512 HOH HOH . E 5 HOH A 17 417 416 HOH HOH . E 5 HOH A 18 418 429 HOH HOH . E 5 HOH A 19 419 418 HOH HOH . E 5 HOH A 20 420 423 HOH HOH . E 5 HOH A 21 421 421 HOH HOH . E 5 HOH A 22 422 25 HOH HOH . E 5 HOH A 23 423 420 HOH HOH . E 5 HOH A 24 424 425 HOH HOH . E 5 HOH A 25 425 432 HOH HOH . E 5 HOH A 26 426 415 HOH HOH . E 5 HOH A 27 427 491 HOH HOH . E 5 HOH A 28 428 441 HOH HOH . E 5 HOH A 29 429 419 HOH HOH . E 5 HOH A 30 430 408 HOH HOH . E 5 HOH A 31 431 428 HOH HOH . E 5 HOH A 32 432 439 HOH HOH . E 5 HOH A 33 433 462 HOH HOH . E 5 HOH A 34 434 440 HOH HOH . E 5 HOH A 35 435 427 HOH HOH . E 5 HOH A 36 436 422 HOH HOH . E 5 HOH A 37 437 457 HOH HOH . E 5 HOH A 38 438 478 HOH HOH . E 5 HOH A 39 439 449 HOH HOH . E 5 HOH A 40 440 442 HOH HOH . E 5 HOH A 41 441 438 HOH HOH . E 5 HOH A 42 442 434 HOH HOH . E 5 HOH A 43 443 431 HOH HOH . E 5 HOH A 44 444 444 HOH HOH . E 5 HOH A 45 445 453 HOH HOH . E 5 HOH A 46 446 433 HOH HOH . E 5 HOH A 47 447 407 HOH HOH . E 5 HOH A 48 448 612 HOH HOH . E 5 HOH A 49 449 451 HOH HOH . E 5 HOH A 50 450 435 HOH HOH . E 5 HOH A 51 451 487 HOH HOH . E 5 HOH A 52 452 481 HOH HOH . E 5 HOH A 53 453 430 HOH HOH . E 5 HOH A 54 454 8 HOH HOH . E 5 HOH A 55 455 467 HOH HOH . E 5 HOH A 56 456 482 HOH HOH . E 5 HOH A 57 457 413 HOH HOH . E 5 HOH A 58 458 479 HOH HOH . E 5 HOH A 59 459 456 HOH HOH . E 5 HOH A 60 460 452 HOH HOH . E 5 HOH A 61 461 480 HOH HOH . E 5 HOH A 62 462 466 HOH HOH . E 5 HOH A 63 463 450 HOH HOH . E 5 HOH A 64 464 455 HOH HOH . E 5 HOH A 65 465 459 HOH HOH . E 5 HOH A 66 466 463 HOH HOH . E 5 HOH A 67 467 458 HOH HOH . E 5 HOH A 68 468 470 HOH HOH . E 5 HOH A 69 469 465 HOH HOH . E 5 HOH A 70 470 446 HOH HOH . E 5 HOH A 71 471 447 HOH HOH . E 5 HOH A 72 472 495 HOH HOH . E 5 HOH A 73 473 474 HOH HOH . E 5 HOH A 74 474 471 HOH HOH . E 5 HOH A 75 475 476 HOH HOH . E 5 HOH A 76 476 597 HOH HOH . E 5 HOH A 77 477 414 HOH HOH . E 5 HOH A 78 478 506 HOH HOH . E 5 HOH A 79 479 484 HOH HOH . E 5 HOH A 80 480 496 HOH HOH . E 5 HOH A 81 481 515 HOH HOH . E 5 HOH A 82 482 500 HOH HOH . E 5 HOH A 83 483 477 HOH HOH . E 5 HOH A 84 484 448 HOH HOH . E 5 HOH A 85 485 461 HOH HOH . E 5 HOH A 86 486 473 HOH HOH . E 5 HOH A 87 487 560 HOH HOH . E 5 HOH A 88 488 498 HOH HOH . E 5 HOH A 89 489 488 HOH HOH . E 5 HOH A 90 490 492 HOH HOH . E 5 HOH A 91 491 486 HOH HOH . E 5 HOH A 92 492 494 HOH HOH . E 5 HOH A 93 493 475 HOH HOH . E 5 HOH A 94 494 504 HOH HOH . E 5 HOH A 95 495 499 HOH HOH . E 5 HOH A 96 496 483 HOH HOH . E 5 HOH A 97 497 489 HOH HOH . E 5 HOH A 98 498 507 HOH HOH . E 5 HOH A 99 499 464 HOH HOH . E 5 HOH A 100 500 505 HOH HOH . E 5 HOH A 101 501 552 HOH HOH . E 5 HOH A 102 502 501 HOH HOH . E 5 HOH A 103 503 21 HOH HOH . E 5 HOH A 104 504 529 HOH HOH . E 5 HOH A 105 505 513 HOH HOH . E 5 HOH A 106 506 502 HOH HOH . E 5 HOH A 107 507 516 HOH HOH . E 5 HOH A 108 508 469 HOH HOH . E 5 HOH A 109 509 510 HOH HOH . E 5 HOH A 110 510 523 HOH HOH . E 5 HOH A 111 511 508 HOH HOH . E 5 HOH A 112 512 497 HOH HOH . E 5 HOH A 113 513 542 HOH HOH . E 5 HOH A 114 514 528 HOH HOH . E 5 HOH A 115 515 468 HOH HOH . E 5 HOH A 116 516 493 HOH HOH . E 5 HOH A 117 517 526 HOH HOH . E 5 HOH A 118 518 554 HOH HOH . E 5 HOH A 119 519 559 HOH HOH . E 5 HOH A 120 520 532 HOH HOH . E 5 HOH A 121 521 520 HOH HOH . E 5 HOH A 122 522 530 HOH HOH . E 5 HOH A 123 523 534 HOH HOH . E 5 HOH A 124 524 531 HOH HOH . E 5 HOH A 125 525 536 HOH HOH . E 5 HOH A 126 526 517 HOH HOH . E 5 HOH A 127 527 503 HOH HOH . E 5 HOH A 128 528 525 HOH HOH . E 5 HOH A 129 529 533 HOH HOH . E 5 HOH A 130 530 437 HOH HOH . E 5 HOH A 131 531 540 HOH HOH . E 5 HOH A 132 532 535 HOH HOH . E 5 HOH A 133 533 524 HOH HOH . E 5 HOH A 134 534 527 HOH HOH . E 5 HOH A 135 535 521 HOH HOH . E 5 HOH A 136 536 537 HOH HOH . E 5 HOH A 137 537 566 HOH HOH . E 5 HOH A 138 538 509 HOH HOH . E 5 HOH A 139 539 538 HOH HOH . E 5 HOH A 140 540 551 HOH HOH . E 5 HOH A 141 541 522 HOH HOH . E 5 HOH A 142 542 546 HOH HOH . E 5 HOH A 143 543 518 HOH HOH . E 5 HOH A 144 544 514 HOH HOH . E 5 HOH A 145 545 550 HOH HOH . E 5 HOH A 146 546 436 HOH HOH . E 5 HOH A 147 547 539 HOH HOH . E 5 HOH A 148 548 544 HOH HOH . E 5 HOH A 149 549 443 HOH HOH . E 5 HOH A 150 550 568 HOH HOH . E 5 HOH A 151 551 567 HOH HOH . E 5 HOH A 152 552 545 HOH HOH . E 5 HOH A 153 553 543 HOH HOH . E 5 HOH A 154 554 553 HOH HOH . E 5 HOH A 155 555 541 HOH HOH . E 5 HOH A 156 556 556 HOH HOH . E 5 HOH A 157 557 562 HOH HOH . E 5 HOH A 158 558 547 HOH HOH . E 5 HOH A 159 559 519 HOH HOH . E 5 HOH A 160 560 28 HOH HOH . E 5 HOH A 161 561 561 HOH HOH . E 5 HOH A 162 562 558 HOH HOH . E 5 HOH A 163 563 607 HOH HOH . E 5 HOH A 164 564 548 HOH HOH . E 5 HOH A 165 565 555 HOH HOH . E 5 HOH A 166 566 576 HOH HOH . E 5 HOH A 167 567 549 HOH HOH . E 5 HOH A 168 568 569 HOH HOH . E 5 HOH A 169 569 585 HOH HOH . E 5 HOH A 170 570 557 HOH HOH . E 5 HOH A 171 571 572 HOH HOH . E 5 HOH A 172 572 577 HOH HOH . E 5 HOH A 173 573 581 HOH HOH . E 5 HOH A 174 574 593 HOH HOH . E 5 HOH A 175 575 454 HOH HOH . E 5 HOH A 176 576 571 HOH HOH . E 5 HOH A 177 577 11 HOH HOH . E 5 HOH A 178 578 565 HOH HOH . E 5 HOH A 179 579 27 HOH HOH . E 5 HOH A 180 580 573 HOH HOH . E 5 HOH A 181 581 589 HOH HOH . E 5 HOH A 182 582 580 HOH HOH . E 5 HOH A 183 583 426 HOH HOH . E 5 HOH A 184 584 575 HOH HOH . E 5 HOH A 185 585 12 HOH HOH . E 5 HOH A 186 586 563 HOH HOH . E 5 HOH A 187 587 588 HOH HOH . E 5 HOH A 188 588 579 HOH HOH . E 5 HOH A 189 589 574 HOH HOH . E 5 HOH A 190 590 599 HOH HOH . E 5 HOH A 191 591 592 HOH HOH . E 5 HOH A 192 592 596 HOH HOH . E 5 HOH A 193 593 6 HOH HOH . E 5 HOH A 194 594 584 HOH HOH . E 5 HOH A 195 595 587 HOH HOH . E 5 HOH A 196 596 601 HOH HOH . E 5 HOH A 197 597 600 HOH HOH . E 5 HOH A 198 598 595 HOH HOH . E 5 HOH A 199 599 594 HOH HOH . E 5 HOH A 200 600 598 HOH HOH . E 5 HOH A 201 601 5 HOH HOH . E 5 HOH A 202 602 17 HOH HOH . E 5 HOH A 203 603 611 HOH HOH . E 5 HOH A 204 604 591 HOH HOH . E 5 HOH A 205 605 605 HOH HOH . E 5 HOH A 206 606 616 HOH HOH . E 5 HOH A 207 607 603 HOH HOH . E 5 HOH A 208 608 14 HOH HOH . E 5 HOH A 209 609 610 HOH HOH . E 5 HOH A 210 610 608 HOH HOH . E 5 HOH A 211 611 602 HOH HOH . E 5 HOH A 212 612 606 HOH HOH . E 5 HOH A 213 613 24 HOH HOH . E 5 HOH A 214 614 586 HOH HOH . E 5 HOH A 215 615 609 HOH HOH . E 5 HOH A 216 616 614 HOH HOH . E 5 HOH A 217 617 618 HOH HOH . E 5 HOH A 218 618 15 HOH HOH . E 5 HOH A 219 619 564 HOH HOH . E 5 HOH A 220 620 620 HOH HOH . E 5 HOH A 221 621 619 HOH HOH . E 5 HOH A 222 622 604 HOH HOH . E 5 HOH A 223 623 590 HOH HOH . E 5 HOH A 224 624 627 HOH HOH . E 5 HOH A 225 625 624 HOH HOH . E 5 HOH A 226 626 613 HOH HOH . E 5 HOH A 227 627 460 HOH HOH . E 5 HOH A 228 628 632 HOH HOH . E 5 HOH A 229 629 623 HOH HOH . E 5 HOH A 230 630 628 HOH HOH . E 5 HOH A 231 631 630 HOH HOH . E 5 HOH A 232 632 635 HOH HOH . E 5 HOH A 233 633 625 HOH HOH . E 5 HOH A 234 634 633 HOH HOH . E 5 HOH A 235 635 634 HOH HOH . E 5 HOH A 236 636 621 HOH HOH . E 5 HOH A 237 637 631 HOH HOH . E 5 HOH A 238 638 23 HOH HOH . E 5 HOH A 239 639 617 HOH HOH . E 5 HOH A 240 640 640 HOH HOH . E 5 HOH A 241 641 637 HOH HOH . E 5 HOH A 242 642 10 HOH HOH . E 5 HOH A 243 643 629 HOH HOH . E 5 HOH A 244 644 18 HOH HOH . E 5 HOH A 245 645 642 HOH HOH . E 5 HOH A 246 646 639 HOH HOH . E 5 HOH A 247 647 636 HOH HOH . E 5 HOH A 248 648 638 HOH HOH . E 5 HOH A 249 649 646 HOH HOH . E 5 HOH A 250 650 644 HOH HOH . E 5 HOH A 251 651 647 HOH HOH . E 5 HOH A 252 652 641 HOH HOH . E 5 HOH A 253 653 649 HOH HOH . E 5 HOH A 254 654 645 HOH HOH . E 5 HOH A 255 655 650 HOH HOH . E 5 HOH A 256 656 4 HOH HOH . E 5 HOH A 257 657 643 HOH HOH . E 5 HOH A 258 658 648 HOH HOH . E 5 HOH A 259 659 651 HOH HOH . E 5 HOH A 260 660 652 HOH HOH . E 5 HOH A 261 661 655 HOH HOH . E 5 HOH A 262 662 26 HOH HOH . E 5 HOH A 263 663 654 HOH HOH . E 5 HOH A 264 664 653 HOH HOH . E 5 HOH A 265 665 658 HOH HOH . E 5 HOH A 266 666 3 HOH HOH . E 5 HOH A 267 667 657 HOH HOH . E 5 HOH A 268 668 16 HOH HOH . E 5 HOH A 269 669 2 HOH HOH . E 5 HOH A 270 670 22 HOH HOH . E 5 HOH A 271 671 661 HOH HOH . E 5 HOH A 272 672 659 HOH HOH . E 5 HOH A 273 673 13 HOH HOH . E 5 HOH A 274 674 660 HOH HOH . E 5 HOH A 275 675 662 HOH HOH . E 5 HOH A 276 676 665 HOH HOH . E 5 HOH A 277 677 19 HOH HOH . E 5 HOH A 278 678 663 HOH HOH . E 5 HOH A 279 679 664 HOH HOH . E 5 HOH A 280 680 667 HOH HOH . E 5 HOH A 281 681 666 HOH HOH . E 5 HOH A 282 682 670 HOH HOH . E 5 HOH A 283 683 671 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.552 _atom_site.Cartn_y 0.193 _atom_site.Cartn_z 15.417 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #