data_6LV9 # _model_server_result.job_id bmE1obbp49qcgAtBlLUbIQ _model_server_result.datetime_utc '2024-11-14 06:47:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6LV9 # _exptl.entry_id 6LV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.169 _cell.angle_gamma 90 _cell.entry_id 6LV9 _cell.length_a 42.326 _cell.length_b 41.225 _cell.length_c 72.085 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N HIS 4 A HIS 4 1_555 D CU CU . A CU 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? metalc ? metalc2 A ND1 HIS 4 A HIS 4 1_555 D CU CU . A CU 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc3 A NE2 HIS 94 A HIS 94 1_555 C CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc4 A NE2 HIS 96 A HIS 96 1_555 C CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc5 A ND1 HIS 119 A HIS 119 1_555 C CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6LV9 _atom_sites.fract_transf_matrix[1][1] 0.023626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005965 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024257 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 302 GOL GOL . C 3 CU A 1 302 1 CU CU . D 3 CU A 1 303 2 CU CU . E 4 HOH A 1 401 608 HOH HOH . E 4 HOH A 2 402 402 HOH HOH . E 4 HOH A 3 403 401 HOH HOH . E 4 HOH A 4 404 403 HOH HOH . E 4 HOH A 5 405 404 HOH HOH . E 4 HOH A 6 406 19 HOH HOH . E 4 HOH A 7 407 412 HOH HOH . E 4 HOH A 8 408 3 HOH HOH . E 4 HOH A 9 409 490 HOH HOH . E 4 HOH A 10 410 409 HOH HOH . E 4 HOH A 11 411 406 HOH HOH . E 4 HOH A 12 412 485 HOH HOH . E 4 HOH A 13 413 10 HOH HOH . E 4 HOH A 14 414 417 HOH HOH . E 4 HOH A 15 415 415 HOH HOH . E 4 HOH A 16 416 443 HOH HOH . E 4 HOH A 17 417 427 HOH HOH . E 4 HOH A 18 418 411 HOH HOH . E 4 HOH A 19 419 512 HOH HOH . E 4 HOH A 20 420 440 HOH HOH . E 4 HOH A 21 421 418 HOH HOH . E 4 HOH A 22 422 416 HOH HOH . E 4 HOH A 23 423 434 HOH HOH . E 4 HOH A 24 424 419 HOH HOH . E 4 HOH A 25 425 420 HOH HOH . E 4 HOH A 26 426 425 HOH HOH . E 4 HOH A 27 427 441 HOH HOH . E 4 HOH A 28 428 449 HOH HOH . E 4 HOH A 29 429 445 HOH HOH . E 4 HOH A 30 430 423 HOH HOH . E 4 HOH A 31 431 421 HOH HOH . E 4 HOH A 32 432 408 HOH HOH . E 4 HOH A 33 433 424 HOH HOH . E 4 HOH A 34 434 422 HOH HOH . E 4 HOH A 35 435 24 HOH HOH . E 4 HOH A 36 436 428 HOH HOH . E 4 HOH A 37 437 432 HOH HOH . E 4 HOH A 38 438 462 HOH HOH . E 4 HOH A 39 439 413 HOH HOH . E 4 HOH A 40 440 491 HOH HOH . E 4 HOH A 41 441 450 HOH HOH . E 4 HOH A 42 442 451 HOH HOH . E 4 HOH A 43 443 429 HOH HOH . E 4 HOH A 44 444 438 HOH HOH . E 4 HOH A 45 445 431 HOH HOH . E 4 HOH A 46 446 597 HOH HOH . E 4 HOH A 47 447 442 HOH HOH . E 4 HOH A 48 448 430 HOH HOH . E 4 HOH A 49 449 14 HOH HOH . E 4 HOH A 50 450 457 HOH HOH . E 4 HOH A 51 451 478 HOH HOH . E 4 HOH A 52 452 435 HOH HOH . E 4 HOH A 53 453 467 HOH HOH . E 4 HOH A 54 454 448 HOH HOH . E 4 HOH A 55 455 439 HOH HOH . E 4 HOH A 56 456 461 HOH HOH . E 4 HOH A 57 457 456 HOH HOH . E 4 HOH A 58 458 477 HOH HOH . E 4 HOH A 59 459 529 HOH HOH . E 4 HOH A 60 460 444 HOH HOH . E 4 HOH A 61 461 446 HOH HOH . E 4 HOH A 62 462 481 HOH HOH . E 4 HOH A 63 463 480 HOH HOH . E 4 HOH A 64 464 452 HOH HOH . E 4 HOH A 65 465 414 HOH HOH . E 4 HOH A 66 466 466 HOH HOH . E 4 HOH A 67 467 554 HOH HOH . E 4 HOH A 68 468 454 HOH HOH . E 4 HOH A 69 469 453 HOH HOH . E 4 HOH A 70 470 436 HOH HOH . E 4 HOH A 71 471 433 HOH HOH . E 4 HOH A 72 472 463 HOH HOH . E 4 HOH A 73 473 458 HOH HOH . E 4 HOH A 74 474 515 HOH HOH . E 4 HOH A 75 475 612 HOH HOH . E 4 HOH A 76 476 447 HOH HOH . E 4 HOH A 77 477 471 HOH HOH . E 4 HOH A 78 478 505 HOH HOH . E 4 HOH A 79 479 474 HOH HOH . E 4 HOH A 80 480 566 HOH HOH . E 4 HOH A 81 481 483 HOH HOH . E 4 HOH A 82 482 455 HOH HOH . E 4 HOH A 83 483 614 HOH HOH . E 4 HOH A 84 484 459 HOH HOH . E 4 HOH A 85 485 11 HOH HOH . E 4 HOH A 86 486 476 HOH HOH . E 4 HOH A 87 487 465 HOH HOH . E 4 HOH A 88 488 486 HOH HOH . E 4 HOH A 89 489 488 HOH HOH . E 4 HOH A 90 490 468 HOH HOH . E 4 HOH A 91 491 484 HOH HOH . E 4 HOH A 92 492 470 HOH HOH . E 4 HOH A 93 493 482 HOH HOH . E 4 HOH A 94 494 500 HOH HOH . E 4 HOH A 95 495 479 HOH HOH . E 4 HOH A 96 496 499 HOH HOH . E 4 HOH A 97 497 473 HOH HOH . E 4 HOH A 98 498 494 HOH HOH . E 4 HOH A 99 499 560 HOH HOH . E 4 HOH A 100 500 475 HOH HOH . E 4 HOH A 101 501 516 HOH HOH . E 4 HOH A 102 502 464 HOH HOH . E 4 HOH A 103 503 502 HOH HOH . E 4 HOH A 104 504 426 HOH HOH . E 4 HOH A 105 505 542 HOH HOH . E 4 HOH A 106 506 527 HOH HOH . E 4 HOH A 107 507 506 HOH HOH . E 4 HOH A 108 508 498 HOH HOH . E 4 HOH A 109 509 531 HOH HOH . E 4 HOH A 110 510 530 HOH HOH . E 4 HOH A 111 511 525 HOH HOH . E 4 HOH A 112 512 520 HOH HOH . E 4 HOH A 113 513 497 HOH HOH . E 4 HOH A 114 514 493 HOH HOH . E 4 HOH A 115 515 492 HOH HOH . E 4 HOH A 116 516 495 HOH HOH . E 4 HOH A 117 517 552 HOH HOH . E 4 HOH A 118 518 540 HOH HOH . E 4 HOH A 119 519 469 HOH HOH . E 4 HOH A 120 520 517 HOH HOH . E 4 HOH A 121 521 496 HOH HOH . E 4 HOH A 122 522 501 HOH HOH . E 4 HOH A 123 523 536 HOH HOH . E 4 HOH A 124 524 513 HOH HOH . E 4 HOH A 125 525 533 HOH HOH . E 4 HOH A 126 526 521 HOH HOH . E 4 HOH A 127 527 559 HOH HOH . E 4 HOH A 128 528 437 HOH HOH . E 4 HOH A 129 529 26 HOH HOH . E 4 HOH A 130 530 534 HOH HOH . E 4 HOH A 131 531 20 HOH HOH . E 4 HOH A 132 532 509 HOH HOH . E 4 HOH A 133 533 504 HOH HOH . E 4 HOH A 134 534 526 HOH HOH . E 4 HOH A 135 535 537 HOH HOH . E 4 HOH A 136 536 528 HOH HOH . E 4 HOH A 137 537 535 HOH HOH . E 4 HOH A 138 538 544 HOH HOH . E 4 HOH A 139 539 523 HOH HOH . E 4 HOH A 140 540 524 HOH HOH . E 4 HOH A 141 541 532 HOH HOH . E 4 HOH A 142 542 570 HOH HOH . E 4 HOH A 143 543 507 HOH HOH . E 4 HOH A 144 544 546 HOH HOH . E 4 HOH A 145 545 518 HOH HOH . E 4 HOH A 146 546 510 HOH HOH . E 4 HOH A 147 547 548 HOH HOH . E 4 HOH A 148 548 553 HOH HOH . E 4 HOH A 149 549 503 HOH HOH . E 4 HOH A 150 550 567 HOH HOH . E 4 HOH A 151 551 545 HOH HOH . E 4 HOH A 152 552 551 HOH HOH . E 4 HOH A 153 553 538 HOH HOH . E 4 HOH A 154 554 547 HOH HOH . E 4 HOH A 155 555 508 HOH HOH . E 4 HOH A 156 556 562 HOH HOH . E 4 HOH A 157 557 539 HOH HOH . E 4 HOH A 158 558 550 HOH HOH . E 4 HOH A 159 559 543 HOH HOH . E 4 HOH A 160 560 568 HOH HOH . E 4 HOH A 161 561 489 HOH HOH . E 4 HOH A 162 562 555 HOH HOH . E 4 HOH A 163 563 487 HOH HOH . E 4 HOH A 164 564 589 HOH HOH . E 4 HOH A 165 565 522 HOH HOH . E 4 HOH A 166 566 556 HOH HOH . E 4 HOH A 167 567 565 HOH HOH . E 4 HOH A 168 568 557 HOH HOH . E 4 HOH A 169 569 519 HOH HOH . E 4 HOH A 170 570 12 HOH HOH . E 4 HOH A 171 571 569 HOH HOH . E 4 HOH A 172 572 587 HOH HOH . E 4 HOH A 173 573 572 HOH HOH . E 4 HOH A 174 574 575 HOH HOH . E 4 HOH A 175 575 561 HOH HOH . E 4 HOH A 176 576 558 HOH HOH . E 4 HOH A 177 577 27 HOH HOH . E 4 HOH A 178 578 563 HOH HOH . E 4 HOH A 179 579 579 HOH HOH . E 4 HOH A 180 580 1 HOH HOH . E 4 HOH A 181 581 541 HOH HOH . E 4 HOH A 182 582 577 HOH HOH . E 4 HOH A 183 583 581 HOH HOH . E 4 HOH A 184 584 514 HOH HOH . E 4 HOH A 185 585 573 HOH HOH . E 4 HOH A 186 586 576 HOH HOH . E 4 HOH A 187 587 583 HOH HOH . E 4 HOH A 188 588 549 HOH HOH . E 4 HOH A 189 589 580 HOH HOH . E 4 HOH A 190 590 599 HOH HOH . E 4 HOH A 191 591 17 HOH HOH . E 4 HOH A 192 592 571 HOH HOH . E 4 HOH A 193 593 584 HOH HOH . E 4 HOH A 194 594 574 HOH HOH . E 4 HOH A 195 595 588 HOH HOH . E 4 HOH A 196 596 596 HOH HOH . E 4 HOH A 197 597 602 HOH HOH . E 4 HOH A 198 598 564 HOH HOH . E 4 HOH A 199 599 598 HOH HOH . E 4 HOH A 200 600 592 HOH HOH . E 4 HOH A 201 601 585 HOH HOH . E 4 HOH A 202 602 460 HOH HOH . E 4 HOH A 203 603 613 HOH HOH . E 4 HOH A 204 604 591 HOH HOH . E 4 HOH A 205 605 600 HOH HOH . E 4 HOH A 206 606 607 HOH HOH . E 4 HOH A 207 607 594 HOH HOH . E 4 HOH A 208 608 13 HOH HOH . E 4 HOH A 209 609 8 HOH HOH . E 4 HOH A 210 610 611 HOH HOH . E 4 HOH A 211 611 605 HOH HOH . E 4 HOH A 212 612 9 HOH HOH . E 4 HOH A 213 613 593 HOH HOH . E 4 HOH A 214 614 595 HOH HOH . E 4 HOH A 215 615 603 HOH HOH . E 4 HOH A 216 616 601 HOH HOH . E 4 HOH A 217 617 610 HOH HOH . E 4 HOH A 218 618 578 HOH HOH . E 4 HOH A 219 619 620 HOH HOH . E 4 HOH A 220 620 606 HOH HOH . E 4 HOH A 221 621 616 HOH HOH . E 4 HOH A 222 622 627 HOH HOH . E 4 HOH A 223 623 586 HOH HOH . E 4 HOH A 224 624 617 HOH HOH . E 4 HOH A 225 625 23 HOH HOH . E 4 HOH A 226 626 609 HOH HOH . E 4 HOH A 227 627 619 HOH HOH . E 4 HOH A 228 628 624 HOH HOH . E 4 HOH A 229 629 618 HOH HOH . E 4 HOH A 230 630 625 HOH HOH . E 4 HOH A 231 631 635 HOH HOH . E 4 HOH A 232 632 628 HOH HOH . E 4 HOH A 233 633 631 HOH HOH . E 4 HOH A 234 634 604 HOH HOH . E 4 HOH A 235 635 636 HOH HOH . E 4 HOH A 236 636 621 HOH HOH . E 4 HOH A 237 637 633 HOH HOH . E 4 HOH A 238 638 630 HOH HOH . E 4 HOH A 239 639 634 HOH HOH . E 4 HOH A 240 640 629 HOH HOH . E 4 HOH A 241 641 623 HOH HOH . E 4 HOH A 242 642 22 HOH HOH . E 4 HOH A 243 643 640 HOH HOH . E 4 HOH A 244 644 637 HOH HOH . E 4 HOH A 245 645 18 HOH HOH . E 4 HOH A 246 646 639 HOH HOH . E 4 HOH A 247 647 638 HOH HOH . E 4 HOH A 248 648 16 HOH HOH . E 4 HOH A 249 649 641 HOH HOH . E 4 HOH A 250 650 644 HOH HOH . E 4 HOH A 251 651 7 HOH HOH . E 4 HOH A 252 652 646 HOH HOH . E 4 HOH A 253 653 647 HOH HOH . E 4 HOH A 254 654 652 HOH HOH . E 4 HOH A 255 655 643 HOH HOH . E 4 HOH A 256 656 650 HOH HOH . E 4 HOH A 257 657 648 HOH HOH . E 4 HOH A 258 658 649 HOH HOH . E 4 HOH A 259 659 632 HOH HOH . E 4 HOH A 260 660 651 HOH HOH . E 4 HOH A 261 661 407 HOH HOH . E 4 HOH A 262 662 654 HOH HOH . E 4 HOH A 263 663 655 HOH HOH . E 4 HOH A 264 664 28 HOH HOH . E 4 HOH A 265 665 25 HOH HOH . E 4 HOH A 266 666 653 HOH HOH . E 4 HOH A 267 667 642 HOH HOH . E 4 HOH A 268 668 658 HOH HOH . E 4 HOH A 269 669 6 HOH HOH . E 4 HOH A 270 670 657 HOH HOH . E 4 HOH A 271 671 5 HOH HOH . E 4 HOH A 272 672 21 HOH HOH . E 4 HOH A 273 673 659 HOH HOH . E 4 HOH A 274 674 662 HOH HOH . E 4 HOH A 275 675 660 HOH HOH . E 4 HOH A 276 676 663 HOH HOH . E 4 HOH A 277 677 661 HOH HOH . E 4 HOH A 278 678 664 HOH HOH . E 4 HOH A 279 679 665 HOH HOH . E 4 HOH A 280 680 666 HOH HOH . E 4 HOH A 281 681 15 HOH HOH . E 4 HOH A 282 682 667 HOH HOH . E 4 HOH A 283 683 668 HOH HOH . E 4 HOH A 284 684 670 HOH HOH . E 4 HOH A 285 685 669 HOH HOH . E 4 HOH A 286 686 671 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 30.147 _atom_site.Cartn_y 3.043 _atom_site.Cartn_z 7.739 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #