data_6LVF # _model_server_result.job_id rC1Ci7U94andifuYstCgDQ _model_server_result.datetime_utc '2024-11-21 14:30:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lvf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1002}' # _entry.id 6LVF # _exptl.entry_id 6LVF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 722.97 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LVF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LVF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C38 H75 O10 P' _chem_comp.formula_weight 722.97 _chem_comp.id LHG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 LHG sing 336 n n O1 HO1 LHG sing 337 n n C1 C2 LHG sing 338 n n C1 HC11 LHG sing 339 n n C1 HC12 LHG sing 340 n n C2 O2 LHG sing 341 n n C2 C3 LHG sing 342 n n C2 HC2 LHG sing 343 n n O2 H02 LHG sing 344 n n C3 O3 LHG sing 345 n n C3 HC31 LHG sing 346 n n C3 HC32 LHG sing 347 n n O3 P LHG sing 348 n n P O4 LHG sing 349 n n P O5 LHG doub 350 n n P O6 LHG sing 351 n n O4 HO4 LHG sing 352 n n O6 C4 LHG sing 353 n n C4 C5 LHG sing 354 n n C4 HC41 LHG sing 355 n n C4 HC42 LHG sing 356 n n C5 C6 LHG sing 357 n n C5 O7 LHG sing 358 n n C5 HC5 LHG sing 359 n n C6 O8 LHG sing 360 n n C6 HC61 LHG sing 361 n n C6 HC62 LHG sing 362 n n O7 C7 LHG sing 363 n n C7 O9 LHG doub 364 n n C7 C8 LHG sing 365 n n C8 C9 LHG sing 366 n n C8 HC81 LHG sing 367 n n C8 HC82 LHG sing 368 n n C9 C10 LHG sing 369 n n C9 HC91 LHG sing 370 n n C9 HC92 LHG sing 371 n n C10 C11 LHG sing 372 n n C10 H101 LHG sing 373 n n C10 H102 LHG sing 374 n n O8 C23 LHG sing 375 n n C23 O10 LHG doub 376 n n C23 C24 LHG sing 377 n n C24 C25 LHG sing 378 n n C24 H241 LHG sing 379 n n C24 H242 LHG sing 380 n n C11 C12 LHG sing 381 n n C11 H111 LHG sing 382 n n C11 H112 LHG sing 383 n n C12 C13 LHG sing 384 n n C12 H121 LHG sing 385 n n C12 H122 LHG sing 386 n n C13 C14 LHG sing 387 n n C13 H131 LHG sing 388 n n C13 H132 LHG sing 389 n n C14 C15 LHG sing 390 n n C14 H141 LHG sing 391 n n C14 H142 LHG sing 392 n n C15 C16 LHG sing 393 n n C15 H151 LHG sing 394 n n C15 H152 LHG sing 395 n n C16 C17 LHG sing 396 n n C16 H161 LHG sing 397 n n C16 H162 LHG sing 398 n n C17 C18 LHG sing 399 n n C17 H171 LHG sing 400 n n C17 H172 LHG sing 401 n n C18 C19 LHG sing 402 n n C18 H181 LHG sing 403 n n C18 H182 LHG sing 404 n n C19 C20 LHG sing 405 n n C19 H191 LHG sing 406 n n C19 H192 LHG sing 407 n n C20 C21 LHG sing 408 n n C20 H201 LHG sing 409 n n C20 H202 LHG sing 410 n n C21 C22 LHG sing 411 n n C21 H211 LHG sing 412 n n C21 H212 LHG sing 413 n n C22 H221 LHG sing 414 n n C22 H222 LHG sing 415 n n C22 H223 LHG sing 416 n n C25 C26 LHG sing 417 n n C25 H251 LHG sing 418 n n C25 H252 LHG sing 419 n n C26 C27 LHG sing 420 n n C26 H261 LHG sing 421 n n C26 H262 LHG sing 422 n n C27 C28 LHG sing 423 n n C27 H271 LHG sing 424 n n C27 H272 LHG sing 425 n n C28 C29 LHG sing 426 n n C28 H281 LHG sing 427 n n C28 H282 LHG sing 428 n n C29 C30 LHG sing 429 n n C29 H291 LHG sing 430 n n C29 H292 LHG sing 431 n n C30 C31 LHG sing 432 n n C30 H301 LHG sing 433 n n C30 H302 LHG sing 434 n n C31 C32 LHG sing 435 n n C31 H311 LHG sing 436 n n C31 H312 LHG sing 437 n n C32 C33 LHG sing 438 n n C32 H321 LHG sing 439 n n C32 H322 LHG sing 440 n n C33 C34 LHG sing 441 n n C33 H331 LHG sing 442 n n C33 H332 LHG sing 443 n n C34 C35 LHG sing 444 n n C34 H341 LHG sing 445 n n C34 H342 LHG sing 446 n n C35 C36 LHG sing 447 n n C35 H351 LHG sing 448 n n C35 H352 LHG sing 449 n n C36 C37 LHG sing 450 n n C36 H361 LHG sing 451 n n C36 H362 LHG sing 452 n n C37 C38 LHG sing 453 n n C37 H371 LHG sing 454 n n C37 H372 LHG sing 455 n n C38 H381 LHG sing 456 n n C38 H382 LHG sing 457 n n C38 H383 LHG sing 458 n n # _atom_sites.entry_id 6LVF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EV9 B 1 1001 1001 EV9 LIG . D 3 LHG B 1 1002 1002 LHG LHG . E 4 PGT B 1 1003 1101 PGT PGT . F 2 EV9 A 1 1001 1001 EV9 LIG . G 3 LHG A 1 1002 1002 LHG LHG . H 4 PGT A 1 1003 1101 PGT PGT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LHG . . . G 3 93.644 96.84 85.921 1 48.81 ? O1 LHG 1002 A 1 HETATM 2 C C1 LHG . . . G 3 93.206 95.712 86.684 1 48.81 ? C1 LHG 1002 A 1 HETATM 3 C C2 LHG . . . G 3 91.746 95.897 87.058 1 48.81 ? C2 LHG 1002 A 1 HETATM 4 O O2 LHG . . . G 3 91.644 96.957 88.007 1 48.81 ? O2 LHG 1002 A 1 HETATM 5 C C3 LHG . . . G 3 91.228 94.636 87.721 1 48.81 ? C3 LHG 1002 A 1 HETATM 6 O O3 LHG . . . G 3 91.498 94.737 89.112 1 48.81 ? O3 LHG 1002 A 1 HETATM 7 P P LHG . . . G 3 90.479 94.093 90.17 1 48.81 ? P LHG 1002 A 1 HETATM 8 O O4 LHG . . . G 3 89.234 94.942 90.218 1 48.81 ? O4 LHG 1002 A 1 HETATM 9 O O5 LHG . . . G 3 90.384 92.612 89.908 1 48.81 ? O5 LHG 1002 A 1 HETATM 10 O O6 LHG . . . G 3 91.25 94.297 91.556 1 48.81 ? O6 LHG 1002 A 1 HETATM 11 C C4 LHG . . . G 3 90.482 94.551 92.72 1 48.81 ? C4 LHG 1002 A 1 HETATM 12 C C5 LHG . . . G 3 91.221 94.03 93.939 1 48.81 ? C5 LHG 1002 A 1 HETATM 13 C C6 LHG . . . G 3 92.723 94.199 93.755 1 48.81 ? C6 LHG 1002 A 1 HETATM 14 O O7 LHG . . . G 3 90.825 94.808 95.061 1 48.81 ? O7 LHG 1002 A 1 HETATM 15 C C7 LHG . . . G 3 89.593 94.376 95.706 1 48.81 ? C7 LHG 1002 A 1 HETATM 16 O O9 LHG . . . G 3 89.098 93.296 95.432 1 48.81 ? O9 LHG 1002 A 1 HETATM 17 C C8 LHG . . . G 3 88.94 95.28 96.725 1 48.81 ? C8 LHG 1002 A 1 HETATM 18 C C9 LHG . . . G 3 89.949 95.636 97.81 1 48.81 ? C9 LHG 1002 A 1 HETATM 19 C C10 LHG . . . G 3 89.41 96.693 98.766 1 48.81 ? C10 LHG 1002 A 1 HETATM 20 O O8 LHG . . . G 3 93.355 93.591 94.872 1 48.81 ? O8 LHG 1002 A 1 HETATM 21 C C23 LHG . . . G 3 94.275 94.344 95.699 1 48.81 ? C23 LHG 1002 A 1 HETATM 22 O O10 LHG . . . G 3 94.92 95.252 95.218 1 48.81 ? O10 LHG 1002 A 1 HETATM 23 C C24 LHG . . . G 3 94.389 94.01 97.161 1 48.81 ? C24 LHG 1002 A 1 HETATM 24 C C11 LHG . . . G 3 90.409 96.941 99.889 1 48.81 ? C11 LHG 1002 A 1 HETATM 25 C C12 LHG . . . G 3 89.949 98.033 100.848 1 48.81 ? C12 LHG 1002 A 1 HETATM 26 C C13 LHG . . . G 3 90.328 99.431 100.372 1 48.81 ? C13 LHG 1002 A 1 HETATM 27 C C14 LHG . . . G 3 91.809 99.532 100.03 1 48.81 ? C14 LHG 1002 A 1 HETATM 28 C C15 LHG . . . G 3 92.233 100.966 99.745 1 48.81 ? C15 LHG 1002 A 1 HETATM 29 C C16 LHG . . . G 3 91.313 101.681 98.763 1 48.81 ? C16 LHG 1002 A 1 HETATM 30 C C17 LHG . . . G 3 91.907 103.041 98.431 1 48.81 ? C17 LHG 1002 A 1 HETATM 31 C C18 LHG . . . G 3 91.227 103.708 97.243 1 48.81 ? C18 LHG 1002 A 1 HETATM 32 C C19 LHG . . . G 3 92.049 104.898 96.764 1 48.81 ? C19 LHG 1002 A 1 HETATM 33 C C20 LHG . . . G 3 91.404 105.559 95.558 1 48.81 ? C20 LHG 1002 A 1 HETATM 34 C C21 LHG . . . G 3 92.374 106.525 94.902 1 48.81 ? C21 LHG 1002 A 1 HETATM 35 C C22 LHG . . . G 3 91.888 106.874 93.519 1 48.81 ? C22 LHG 1002 A 1 HETATM 36 C C25 LHG . . . G 3 94.321 95.299 97.958 1 48.81 ? C25 LHG 1002 A 1 HETATM 37 C C26 LHG . . . G 3 94.276 95.012 99.449 1 48.81 ? C26 LHG 1002 A 1 HETATM 38 C C27 LHG . . . G 3 94.137 96.311 100.23 1 48.81 ? C27 LHG 1002 A 1 HETATM 39 C C28 LHG . . . G 3 94.289 96.077 101.725 1 48.81 ? C28 LHG 1002 A 1 HETATM 40 C C29 LHG . . . G 3 95.572 96.712 102.23 1 48.81 ? C29 LHG 1002 A 1 HETATM 41 C C30 LHG . . . G 3 95.999 96.114 103.56 1 48.81 ? C30 LHG 1002 A 1 HETATM 42 C C31 LHG . . . G 3 97.392 96.563 103.993 1 48.81 ? C31 LHG 1002 A 1 HETATM 43 C C32 LHG . . . G 3 97.706 98.016 103.658 1 48.81 ? C32 LHG 1002 A 1 HETATM 44 C C33 LHG . . . G 3 98.878 98.533 104.481 1 48.81 ? C33 LHG 1002 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 44 #