data_6LW1
#
_model_server_result.job_id            wjfbE6SkSOQ4mheq9Wfc9g 
_model_server_result.datetime_utc      '2024-11-15 12:01:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lw1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1001}' 
#
_entry.id    6LW1 
#
_exptl.entry_id    6LW1 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              487.572 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-ethoxy-8-(5-fluoranylpyridin-3-yl)-6-methyl-9-[[4-[[(1S,4S)-5-methyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]methyl]phenyl]methyl]purine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LW1 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LW1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 14 A CYS 36 1_555 A SG CYS 29 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 76 A CYS 98 1_555 A SG CYS 453 A CYS 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf3 A SG CYS 78 A CYS 100 1_555 A SG CYS 90 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 A SG CYS 161 A CYS 183 1_555 A SG CYS 167 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 A SG CYS 241 A CYS 263 1_555 A SG CYS 248 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf6 A SG CYS 469 A CYS 491 1_555 A SG CYS 499 A CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf7 A SG CYS 765 A CYS 787 1_555 A SG CYS 792 A CYS 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf8 A SG CYS 767 A CYS 789 1_555 A SG CYS 811 A CYS 833 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf9 B SG CYS 14 B CYS 36 1_555 B SG CYS 29 B CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf10 B SG CYS 76 B CYS 98 1_555 B SG CYS 453 B CYS 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf11 B SG CYS 78 B CYS 100 1_555 B SG CYS 90 B CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf12 B SG CYS 161 B CYS 183 1_555 B SG CYS 167 B CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf13 B SG CYS 241 B CYS 263 1_555 B SG CYS 248 B CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf14 B SG CYS 469 B CYS 491 1_555 B SG CYS 499 B CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf15 B SG CYS 765 B CYS 787 1_555 B SG CYS 792 B CYS 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf16 B SG CYS 767 B CYS 789 1_555 B SG CYS 811 B CYS 833 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C27 H30 F N7 O' 
_chem_comp.formula_weight    487.572 
_chem_comp.id                EX3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-ethoxy-8-(5-fluoranylpyridin-3-yl)-6-methyl-9-[[4-[[(1S,4S)-5-methyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]methyl]phenyl]methyl]purine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C1 EX3 doub 83 n y 
N C3 EX3 sing 84 n y 
C C1 EX3 sing 85 n y 
C C2 EX3 doub 86 n y 
C N2 EX3 sing 87 n y 
O C3 EX3 sing 88 n n 
O C5 EX3 sing 89 n n 
C1 N3 EX3 sing 90 n y 
C10 C11 EX3 doub 91 n y 
C10 C9 EX3 sing 92 n y 
C11 C13 EX3 sing 93 n y 
C11 C19 EX3 sing 94 n n 
C12 C13 EX3 doub 95 n y 
C12 C8 EX3 sing 96 n y 
C14 C15 EX3 doub 97 n y 
C14 C16 EX3 sing 98 n y 
C14 C4 EX3 sing 99 n n 
C15 C17 EX3 sing 100 n y 
C16 N4 EX3 doub 101 n y 
C17 C18 EX3 doub 102 n y 
C17 F EX3 sing 103 n n 
C18 N4 EX3 sing 104 n y 
C19 N5 EX3 sing 105 n n 
C2 C26 EX3 sing 106 n n 
C2 N1 EX3 sing 107 n y 
C20 C22 EX3 sing 108 n n 
C20 N5 EX3 sing 109 n n 
C21 C23 EX3 sing 110 n n 
C21 C25 EX3 sing 111 n n 
C21 N5 EX3 sing 112 n n 
C22 C25 EX3 sing 113 n n 
C22 N6 EX3 sing 114 n n 
C23 N6 EX3 sing 115 n n 
C24 N6 EX3 sing 116 n n 
C3 N1 EX3 doub 117 n y 
C4 N2 EX3 doub 118 n y 
C4 N3 EX3 sing 119 n y 
C5 C6 EX3 sing 120 n n 
C7 C8 EX3 sing 121 n n 
C7 N3 EX3 sing 122 n n 
C8 C9 EX3 doub 123 n y 
C10 H1 EX3 sing 124 n n 
C12 H2 EX3 sing 125 n n 
C13 H3 EX3 sing 126 n n 
C15 H4 EX3 sing 127 n n 
C16 H5 EX3 sing 128 n n 
C18 H6 EX3 sing 129 n n 
C19 H7 EX3 sing 130 n n 
C19 H8 EX3 sing 131 n n 
C20 H9 EX3 sing 132 n n 
C20 H10 EX3 sing 133 n n 
C21 H11 EX3 sing 134 n n 
C22 H12 EX3 sing 135 n n 
C23 H13 EX3 sing 136 n n 
C23 H14 EX3 sing 137 n n 
C24 H15 EX3 sing 138 n n 
C24 H16 EX3 sing 139 n n 
C24 H17 EX3 sing 140 n n 
C25 H18 EX3 sing 141 n n 
C25 H19 EX3 sing 142 n n 
C26 H20 EX3 sing 143 n n 
C26 H21 EX3 sing 144 n n 
C26 H22 EX3 sing 145 n n 
C5 H23 EX3 sing 146 n n 
C5 H24 EX3 sing 147 n n 
C6 H25 EX3 sing 148 n n 
C6 H26 EX3 sing 149 n n 
C6 H27 EX3 sing 150 n n 
C7 H28 EX3 sing 151 n n 
C7 H29 EX3 sing 152 n n 
C9 H30 EX3 sing 153 n n 
#
_atom_sites.entry_id                     6LW1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EX3 A 1 1001 2 EX3 sdf . 
D 2 EX3 B 1 1001 1 EX3 sdf . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N EX3 . . . D 2 104.139 94.345 121.328 1 17.29 ? N EX3 1001 B 1 
HETATM 2 C C EX3 . . . D 2 106.186 95.118 122.324 1 17.29 ? C EX3 1001 B 1 
HETATM 3 O O EX3 . . . D 2 102.451 93.518 122.675 1 17.29 ? O EX3 1001 B 1 
HETATM 4 C C1 EX3 . . . D 2 105.354 94.878 121.159 1 17.29 ? C1 EX3 1001 B 1 
HETATM 5 C C10 EX3 . . . D 2 107.229 91.869 118.057 1 17.29 ? C10 EX3 1001 B 1 
HETATM 6 C C11 EX3 . . . D 2 107.816 92.085 116.827 1 17.29 ? C11 EX3 1001 B 1 
HETATM 7 C C12 EX3 . . . D 2 106.963 94.32 116.821 1 17.29 ? C12 EX3 1001 B 1 
HETATM 8 C C13 EX3 . . . D 2 107.678 93.31 116.203 1 17.29 ? C13 EX3 1001 B 1 
HETATM 9 C C14 EX3 . . . D 2 108.355 96.224 119.725 1 17.29 ? C14 EX3 1001 B 1 
HETATM 10 C C15 EX3 . . . D 2 109.581 95.771 120.141 1 17.29 ? C15 EX3 1001 B 1 
HETATM 11 C C16 EX3 . . . D 2 108.273 97.012 118.59 1 17.29 ? C16 EX3 1001 B 1 
HETATM 12 C C17 EX3 . . . D 2 110.696 96.121 119.434 1 17.29 ? C17 EX3 1001 B 1 
HETATM 13 C C18 EX3 . . . D 2 110.576 96.914 118.312 1 17.29 ? C18 EX3 1001 B 1 
HETATM 14 C C19 EX3 . . . D 2 108.586 90.965 116.171 1 17.29 ? C19 EX3 1001 B 1 
HETATM 15 C C2 EX3 . . . D 2 105.644 94.771 123.633 1 17.29 ? C2 EX3 1001 B 1 
HETATM 16 C C20 EX3 . . . D 2 110.511 90.431 114.783 1 17.29 ? C20 EX3 1001 B 1 
HETATM 17 C C21 EX3 . . . D 2 110.815 91.85 116.66 1 17.29 ? C21 EX3 1001 B 1 
HETATM 18 C C22 EX3 . . . D 2 111.722 90.797 115.506 1 17.29 ? C22 EX3 1001 B 1 
HETATM 19 C C23 EX3 . . . D 2 111.893 92.718 115.983 1 17.29 ? C23 EX3 1001 B 1 
HETATM 20 C C24 EX3 . . . D 2 112.491 92.151 113.745 1 17.29 ? C24 EX3 1001 B 1 
HETATM 21 C C25 EX3 . . . D 2 111.58 90.574 116.928 1 17.29 ? C25 EX3 1001 B 1 
HETATM 22 C C26 EX3 . . . D 2 106.439 94.997 124.874 1 17.29 ? C26 EX3 1001 B 1 
HETATM 23 C C3 EX3 . . . D 2 103.694 94.045 122.558 1 17.29 ? C3 EX3 1001 B 1 
HETATM 24 C C4 EX3 . . . D 2 107.227 95.746 120.548 1 17.29 ? C4 EX3 1001 B 1 
HETATM 25 C C5 EX3 . . . D 2 101.726 93.205 121.5 1 17.29 ? C5 EX3 1001 B 1 
HETATM 26 C C6 EX3 . . . D 2 100.411 92.626 121.939 1 17.29 ? C6 EX3 1001 B 1 
HETATM 27 C C7 EX3 . . . D 2 105.599 95.184 118.744 1 17.29 ? C7 EX3 1001 B 1 
HETATM 28 C C8 EX3 . . . D 2 106.379 94.098 118.053 1 17.29 ? C8 EX3 1001 B 1 
HETATM 29 C C9 EX3 . . . D 2 106.519 92.874 118.673 1 17.29 ? C9 EX3 1001 B 1 
HETATM 30 F F EX3 . . . D 2 111.882 95.688 119.857 1 17.29 ? F EX3 1001 B 1 
HETATM 31 N N1 EX3 . . . D 2 104.415 94.247 123.676 1 17.29 ? N1 EX3 1001 B 1 
HETATM 32 N N2 EX3 . . . D 2 107.321 95.637 121.88 1 17.29 ? N2 EX3 1001 B 1 
HETATM 33 N N3 EX3 . . . D 2 106.058 95.262 120.116 1 17.29 ? N3 EX3 1001 B 1 
HETATM 34 N N4 EX3 . . . D 2 109.377 97.336 117.916 1 17.29 ? N4 EX3 1001 B 1 
HETATM 35 N N5 EX3 . . . D 2 109.837 91.468 115.598 1 17.29 ? N5 EX3 1001 B 1 
HETATM 36 N N6 EX3 . . . D 2 112.656 91.776 115.146 1 17.29 ? N6 EX3 1001 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           36 
#