data_6LXM
#
_model_server_result.job_id            p_p4J-IkJlsyhHigIPDlOA 
_model_server_result.datetime_utc      '2024-10-20 00:38:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lxm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":204}' 
#
_entry.id    6LXM 
#
_exptl.entry_id    6LXM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6LXM 
_cell.length_a            98.683 
_cell.length_b            98.683 
_cell.length_c            92.717 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LXM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,T 1 1 
A,D,E,F,G,T 1 2 
B,C,H,I,J,K,L,M,N,O,P,Q,R,S,U,V 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 R N N 
? 4 S N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 148 n n 
C1 C2 GOL sing 149 n n 
C1 H11 GOL sing 150 n n 
C1 H12 GOL sing 151 n n 
O1 HO1 GOL sing 152 n n 
C2 O2 GOL sing 153 n n 
C2 C3 GOL sing 154 n n 
C2 H2 GOL sing 155 n n 
O2 HO2 GOL sing 156 n n 
C3 O3 GOL sing 157 n n 
C3 H31 GOL sing 158 n n 
C3 H32 GOL sing 159 n n 
O3 HO3 GOL sing 160 n n 
#
_atom_sites.entry_id                     6LXM 
_atom_sites.fract_transf_matrix[1][1]    0.010133 
_atom_sites.fract_transf_matrix[1][2]    0.005851 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011701 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010786 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 BTB C 1 201 1 BTB BTB . 
E 3 SO4 C 1 202 9 SO4 SO4 . 
F 4 GOL C 1 203 1 GOL GOL . 
G 4 GOL C 1 204 9 GOL GOL . 
H 3 SO4 A 1 201 3 SO4 SO4 . 
I 3 SO4 A 1 202 8 SO4 SO4 . 
J 4 GOL A 1 203 3 GOL GOL . 
K 4 GOL A 1 204 4 GOL GOL . 
L 4 GOL A 1 205 5 GOL GOL . 
M 4 GOL A 1 206 6 GOL GOL . 
N 4 GOL A 1 207 8 GOL GOL . 
O 3 SO4 B 1 201 1 SO4 SO4 . 
P 3 SO4 B 1 202 2 SO4 SO4 . 
Q 3 SO4 B 1 203 4 SO4 SO4 . 
R 4 GOL B 1 204 2 GOL GOL . 
S 4 GOL B 1 205 7 GOL GOL . 
T 5 HOH C 1 301 82 HOH HOH . 
T 5 HOH C 2 302 85 HOH HOH . 
T 5 HOH C 3 303 24 HOH HOH . 
T 5 HOH C 4 304 86 HOH HOH . 
T 5 HOH C 5 305 3 HOH HOH . 
T 5 HOH C 6 306 64 HOH HOH . 
T 5 HOH C 7 307 31 HOH HOH . 
T 5 HOH C 8 308 40 HOH HOH . 
T 5 HOH C 9 309 121 HOH HOH . 
T 5 HOH C 10 310 108 HOH HOH . 
T 5 HOH C 11 311 12 HOH HOH . 
T 5 HOH C 12 312 113 HOH HOH . 
T 5 HOH C 13 313 83 HOH HOH . 
T 5 HOH C 14 314 2 HOH HOH . 
T 5 HOH C 15 315 60 HOH HOH . 
T 5 HOH C 16 316 26 HOH HOH . 
T 5 HOH C 17 317 43 HOH HOH . 
T 5 HOH C 18 318 93 HOH HOH . 
T 5 HOH C 19 319 36 HOH HOH . 
T 5 HOH C 20 320 37 HOH HOH . 
T 5 HOH C 21 321 77 HOH HOH . 
T 5 HOH C 22 322 21 HOH HOH . 
T 5 HOH C 23 323 66 HOH HOH . 
T 5 HOH C 24 324 39 HOH HOH . 
T 5 HOH C 25 325 7 HOH HOH . 
T 5 HOH C 26 326 30 HOH HOH . 
T 5 HOH C 27 327 115 HOH HOH . 
T 5 HOH C 28 328 46 HOH HOH . 
T 5 HOH C 29 329 6 HOH HOH . 
T 5 HOH C 30 330 53 HOH HOH . 
T 5 HOH C 31 331 48 HOH HOH . 
T 5 HOH C 32 332 15 HOH HOH . 
T 5 HOH C 33 333 116 HOH HOH . 
T 5 HOH C 34 334 57 HOH HOH . 
T 5 HOH C 35 335 101 HOH HOH . 
T 5 HOH C 36 336 68 HOH HOH . 
T 5 HOH C 37 337 106 HOH HOH . 
T 5 HOH C 38 338 76 HOH HOH . 
T 5 HOH C 39 339 73 HOH HOH . 
T 5 HOH C 40 340 103 HOH HOH . 
U 5 HOH A 1 301 107 HOH HOH . 
U 5 HOH A 2 302 16 HOH HOH . 
U 5 HOH A 3 303 117 HOH HOH . 
U 5 HOH A 4 304 22 HOH HOH . 
U 5 HOH A 5 305 5 HOH HOH . 
U 5 HOH A 6 306 23 HOH HOH . 
U 5 HOH A 7 307 96 HOH HOH . 
U 5 HOH A 8 308 98 HOH HOH . 
U 5 HOH A 9 309 50 HOH HOH . 
U 5 HOH A 10 310 49 HOH HOH . 
U 5 HOH A 11 311 51 HOH HOH . 
U 5 HOH A 12 312 97 HOH HOH . 
U 5 HOH A 13 313 8 HOH HOH . 
U 5 HOH A 14 314 11 HOH HOH . 
U 5 HOH A 15 315 19 HOH HOH . 
U 5 HOH A 16 316 52 HOH HOH . 
U 5 HOH A 17 317 112 HOH HOH . 
U 5 HOH A 18 318 13 HOH HOH . 
U 5 HOH A 19 319 9 HOH HOH . 
U 5 HOH A 20 320 63 HOH HOH . 
U 5 HOH A 21 321 84 HOH HOH . 
U 5 HOH A 22 322 104 HOH HOH . 
U 5 HOH A 23 323 94 HOH HOH . 
U 5 HOH A 24 324 56 HOH HOH . 
U 5 HOH A 25 325 55 HOH HOH . 
U 5 HOH A 26 326 109 HOH HOH . 
U 5 HOH A 27 327 58 HOH HOH . 
U 5 HOH A 28 328 10 HOH HOH . 
U 5 HOH A 29 329 32 HOH HOH . 
U 5 HOH A 30 330 102 HOH HOH . 
U 5 HOH A 31 331 29 HOH HOH . 
U 5 HOH A 32 332 62 HOH HOH . 
U 5 HOH A 33 333 61 HOH HOH . 
U 5 HOH A 34 334 89 HOH HOH . 
U 5 HOH A 35 335 119 HOH HOH . 
U 5 HOH A 36 336 69 HOH HOH . 
U 5 HOH A 37 337 81 HOH HOH . 
U 5 HOH A 38 338 72 HOH HOH . 
U 5 HOH A 39 339 80 HOH HOH . 
U 5 HOH A 40 340 120 HOH HOH . 
U 5 HOH A 41 341 118 HOH HOH . 
V 5 HOH B 1 301 33 HOH HOH . 
V 5 HOH B 2 302 123 HOH HOH . 
V 5 HOH B 3 303 88 HOH HOH . 
V 5 HOH B 4 304 4 HOH HOH . 
V 5 HOH B 5 305 65 HOH HOH . 
V 5 HOH B 6 306 91 HOH HOH . 
V 5 HOH B 7 307 99 HOH HOH . 
V 5 HOH B 8 308 18 HOH HOH . 
V 5 HOH B 9 309 42 HOH HOH . 
V 5 HOH B 10 310 44 HOH HOH . 
V 5 HOH B 11 311 35 HOH HOH . 
V 5 HOH B 12 312 38 HOH HOH . 
V 5 HOH B 13 313 54 HOH HOH . 
V 5 HOH B 14 314 1 HOH HOH . 
V 5 HOH B 15 315 45 HOH HOH . 
V 5 HOH B 16 316 25 HOH HOH . 
V 5 HOH B 17 317 27 HOH HOH . 
V 5 HOH B 18 318 20 HOH HOH . 
V 5 HOH B 19 319 122 HOH HOH . 
V 5 HOH B 20 320 110 HOH HOH . 
V 5 HOH B 21 321 47 HOH HOH . 
V 5 HOH B 22 322 105 HOH HOH . 
V 5 HOH B 23 323 59 HOH HOH . 
V 5 HOH B 24 324 78 HOH HOH . 
V 5 HOH B 25 325 71 HOH HOH . 
V 5 HOH B 26 326 111 HOH HOH . 
V 5 HOH B 27 327 95 HOH HOH . 
V 5 HOH B 28 328 14 HOH HOH . 
V 5 HOH B 29 329 114 HOH HOH . 
V 5 HOH B 30 330 28 HOH HOH . 
V 5 HOH B 31 331 87 HOH HOH . 
V 5 HOH B 32 332 17 HOH HOH . 
V 5 HOH B 33 333 67 HOH HOH . 
V 5 HOH B 34 334 41 HOH HOH . 
V 5 HOH B 35 335 74 HOH HOH . 
V 5 HOH B 36 336 34 HOH HOH . 
V 5 HOH B 37 337 90 HOH HOH . 
V 5 HOH B 38 338 92 HOH HOH . 
V 5 HOH B 39 339 70 HOH HOH . 
V 5 HOH B 40 340 100 HOH HOH . 
V 5 HOH B 41 341 79 HOH HOH . 
V 5 HOH B 42 342 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 4 13.206 30.129 -9.375 1 87 ? C1 GOL 204 A 1 
HETATM 2 O O1 GOL . . . K 4 13.516 31.441 -9.762 1 87.83 ? O1 GOL 204 A 1 
HETATM 3 C C2 GOL . . . K 4 13.817 29.137 -10.365 1 85.4 ? C2 GOL 204 A 1 
HETATM 4 O O2 GOL . . . K 4 14.032 27.932 -9.677 1 84.92 ? O2 GOL 204 A 1 
HETATM 5 C C3 GOL . . . K 4 12.844 28.933 -11.534 1 80.53 ? C3 GOL 204 A 1 
HETATM 6 O O3 GOL . . . K 4 13.448 28.922 -12.804 1 75.5 ? O3 GOL 204 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#