data_6LY7 # _model_server_result.job_id N35uxNZdpkSNIFbFMQUNdA _model_server_result.datetime_utc '2025-01-11 07:57:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ly7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6LY7 # _exptl.entry_id 6LY7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6LY7 _cell.length_a 105.346 _cell.length_b 105.346 _cell.length_c 72.396 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LY7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall 'P 64' _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_985 -x+4,-y+3,z -1 0 0 0 -1 0 0 0 1 263.365 273.696937 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 219 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc2 A OE2 GLU 219 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? metalc ? metalc3 A OG SER 222 A SER 399 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc4 B O1B ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc5 B O2A ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc6 B O2G ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc7 B O2B ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc8 D MG MG . A MG 503 1_555 F O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc9 D MG MG . A MG 503 1_555 F O HOH . A HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc10 D MG MG . A MG 503 1_555 F O HOH . A HOH 674 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc11 D MG MG . A MG 503 1_555 F O HOH . A HOH 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6LY7 _atom_sites.fract_transf_matrix[1][1] 0.009493 _atom_sites.fract_transf_matrix[1][2] 0.005481 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010961 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013813 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 501 1 ANP ANP . C 3 MG A 1 502 1 MG MG . D 3 MG A 1 503 2 MG MG . E 4 TRF A 1 504 1 TRF FOW . F 5 HOH A 1 601 115 HOH HOH . F 5 HOH A 2 602 147 HOH HOH . F 5 HOH A 3 603 121 HOH HOH . F 5 HOH A 4 604 125 HOH HOH . F 5 HOH A 5 605 129 HOH HOH . F 5 HOH A 6 606 41 HOH HOH . F 5 HOH A 7 607 56 HOH HOH . F 5 HOH A 8 608 113 HOH HOH . F 5 HOH A 9 609 64 HOH HOH . F 5 HOH A 10 610 172 HOH HOH . F 5 HOH A 11 611 24 HOH HOH . F 5 HOH A 12 612 3 HOH HOH . F 5 HOH A 13 613 15 HOH HOH . F 5 HOH A 14 614 2 HOH HOH . F 5 HOH A 15 615 87 HOH HOH . F 5 HOH A 16 616 134 HOH HOH . F 5 HOH A 17 617 119 HOH HOH . F 5 HOH A 18 618 168 HOH HOH . F 5 HOH A 19 619 42 HOH HOH . F 5 HOH A 20 620 75 HOH HOH . F 5 HOH A 21 621 117 HOH HOH . F 5 HOH A 22 622 123 HOH HOH . F 5 HOH A 23 623 36 HOH HOH . F 5 HOH A 24 624 61 HOH HOH . F 5 HOH A 25 625 49 HOH HOH . F 5 HOH A 26 626 46 HOH HOH . F 5 HOH A 27 627 160 HOH HOH . F 5 HOH A 28 628 143 HOH HOH . F 5 HOH A 29 629 8 HOH HOH . F 5 HOH A 30 630 18 HOH HOH . F 5 HOH A 31 631 69 HOH HOH . F 5 HOH A 32 632 124 HOH HOH . F 5 HOH A 33 633 11 HOH HOH . F 5 HOH A 34 634 17 HOH HOH . F 5 HOH A 35 635 4 HOH HOH . F 5 HOH A 36 636 95 HOH HOH . F 5 HOH A 37 637 5 HOH HOH . F 5 HOH A 38 638 13 HOH HOH . F 5 HOH A 39 639 31 HOH HOH . F 5 HOH A 40 640 92 HOH HOH . F 5 HOH A 41 641 47 HOH HOH . F 5 HOH A 42 642 137 HOH HOH . F 5 HOH A 43 643 52 HOH HOH . F 5 HOH A 44 644 55 HOH HOH . F 5 HOH A 45 645 12 HOH HOH . F 5 HOH A 46 646 94 HOH HOH . F 5 HOH A 47 647 1 HOH HOH . F 5 HOH A 48 648 131 HOH HOH . F 5 HOH A 49 649 140 HOH HOH . F 5 HOH A 50 650 14 HOH HOH . F 5 HOH A 51 651 174 HOH HOH . F 5 HOH A 52 652 116 HOH HOH . F 5 HOH A 53 653 30 HOH HOH . F 5 HOH A 54 654 20 HOH HOH . F 5 HOH A 55 655 144 HOH HOH . F 5 HOH A 56 656 54 HOH HOH . F 5 HOH A 57 657 10 HOH HOH . F 5 HOH A 58 658 65 HOH HOH . F 5 HOH A 59 659 44 HOH HOH . F 5 HOH A 60 660 167 HOH HOH . F 5 HOH A 61 661 32 HOH HOH . F 5 HOH A 62 662 53 HOH HOH . F 5 HOH A 63 663 58 HOH HOH . F 5 HOH A 64 664 43 HOH HOH . F 5 HOH A 65 665 22 HOH HOH . F 5 HOH A 66 666 89 HOH HOH . F 5 HOH A 67 667 27 HOH HOH . F 5 HOH A 68 668 164 HOH HOH . F 5 HOH A 69 669 33 HOH HOH . F 5 HOH A 70 670 25 HOH HOH . F 5 HOH A 71 671 7 HOH HOH . F 5 HOH A 72 672 35 HOH HOH . F 5 HOH A 73 673 149 HOH HOH . F 5 HOH A 74 674 166 HOH HOH . F 5 HOH A 75 675 51 HOH HOH . F 5 HOH A 76 676 70 HOH HOH . F 5 HOH A 77 677 21 HOH HOH . F 5 HOH A 78 678 23 HOH HOH . F 5 HOH A 79 679 152 HOH HOH . F 5 HOH A 80 680 136 HOH HOH . F 5 HOH A 81 681 19 HOH HOH . F 5 HOH A 82 682 6 HOH HOH . F 5 HOH A 83 683 126 HOH HOH . F 5 HOH A 84 684 170 HOH HOH . F 5 HOH A 85 685 38 HOH HOH . F 5 HOH A 86 686 163 HOH HOH . F 5 HOH A 87 687 16 HOH HOH . F 5 HOH A 88 688 40 HOH HOH . F 5 HOH A 89 689 45 HOH HOH . F 5 HOH A 90 690 151 HOH HOH . F 5 HOH A 91 691 34 HOH HOH . F 5 HOH A 92 692 57 HOH HOH . F 5 HOH A 93 693 9 HOH HOH . F 5 HOH A 94 694 37 HOH HOH . F 5 HOH A 95 695 90 HOH HOH . F 5 HOH A 96 696 130 HOH HOH . F 5 HOH A 97 697 165 HOH HOH . F 5 HOH A 98 698 60 HOH HOH . F 5 HOH A 99 699 105 HOH HOH . F 5 HOH A 100 700 88 HOH HOH . F 5 HOH A 101 701 62 HOH HOH . F 5 HOH A 102 702 66 HOH HOH . F 5 HOH A 103 703 85 HOH HOH . F 5 HOH A 104 704 97 HOH HOH . F 5 HOH A 105 705 77 HOH HOH . F 5 HOH A 106 706 26 HOH HOH . F 5 HOH A 107 707 109 HOH HOH . F 5 HOH A 108 708 48 HOH HOH . F 5 HOH A 109 709 122 HOH HOH . F 5 HOH A 110 710 127 HOH HOH . F 5 HOH A 111 711 82 HOH HOH . F 5 HOH A 112 712 154 HOH HOH . F 5 HOH A 113 713 80 HOH HOH . F 5 HOH A 114 714 73 HOH HOH . F 5 HOH A 115 715 63 HOH HOH . F 5 HOH A 116 716 120 HOH HOH . F 5 HOH A 117 717 29 HOH HOH . F 5 HOH A 118 719 101 HOH HOH . F 5 HOH A 119 720 111 HOH HOH . F 5 HOH A 120 721 28 HOH HOH . F 5 HOH A 121 722 138 HOH HOH . F 5 HOH A 122 723 50 HOH HOH . F 5 HOH A 123 724 169 HOH HOH . F 5 HOH A 124 725 91 HOH HOH . F 5 HOH A 125 726 142 HOH HOH . F 5 HOH A 126 727 108 HOH HOH . F 5 HOH A 127 728 139 HOH HOH . F 5 HOH A 128 729 135 HOH HOH . F 5 HOH A 129 730 81 HOH HOH . F 5 HOH A 130 731 84 HOH HOH . F 5 HOH A 131 732 68 HOH HOH . F 5 HOH A 132 733 148 HOH HOH . F 5 HOH A 133 734 114 HOH HOH . F 5 HOH A 134 735 102 HOH HOH . F 5 HOH A 135 736 71 HOH HOH . F 5 HOH A 136 737 78 HOH HOH . F 5 HOH A 137 738 155 HOH HOH . F 5 HOH A 138 739 99 HOH HOH . F 5 HOH A 139 740 59 HOH HOH . F 5 HOH A 140 741 112 HOH HOH . F 5 HOH A 141 742 67 HOH HOH . F 5 HOH A 142 743 171 HOH HOH . F 5 HOH A 143 744 173 HOH HOH . F 5 HOH A 144 745 83 HOH HOH . F 5 HOH A 145 746 159 HOH HOH . F 5 HOH A 146 747 72 HOH HOH . F 5 HOH A 147 748 118 HOH HOH . F 5 HOH A 148 749 39 HOH HOH . F 5 HOH A 149 750 74 HOH HOH . F 5 HOH A 150 751 150 HOH HOH . F 5 HOH A 151 752 110 HOH HOH . F 5 HOH A 152 753 76 HOH HOH . F 5 HOH A 153 754 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 111.621 _atom_site.Cartn_y 144.096 _atom_site.Cartn_z -12.485 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #