data_6M06
#
_model_server_result.job_id            C3wafwVdDJZBsF8f_suEoQ 
_model_server_result.datetime_utc      '2025-01-10 06:25:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m06 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    6M06 
#
_exptl.entry_id    6M06 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              201.177 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-[(Z)-1,3-bis(oxidanyl)-3-oxidanylidene-prop-1-enyl]pyrrolidine-1-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.04 
_cell.angle_gamma         90 
_cell.entry_id            6M06 
_cell.length_a            116.014 
_cell.length_b            83.22 
_cell.length_c            96.581 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M06 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 220 A SER 273 1_555 C C1 BWF . A BWF 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.379 ? 
covale ? covale2 B OG SER 220 B SER 273 1_555 D C1 BWF . B BWF 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? 
#
_chem_comp.formula           'C8 H11 N O5' 
_chem_comp.formula_weight    201.177 
_chem_comp.id                BWF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-[(Z)-1,3-bis(oxidanyl)-3-oxidanylidene-prop-1-enyl]pyrrolidine-1-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C9 C8 BWF sing 70 n n 
C9 N5 BWF sing 71 n n 
C8 C7 BWF sing 72 n n 
C1 N5 BWF sing 73 n n 
C1 O3 BWF doub 74 n n 
N5 C6 BWF sing 75 n n 
C7 C6 BWF sing 76 n n 
C6 C10 BWF sing 77 n n 
C12 C10 BWF doub 78 z n 
C12 C13 BWF sing 79 n n 
C10 O11 BWF sing 80 n n 
O14 C13 BWF doub 81 n n 
C13 O16 BWF sing 82 n n 
C6 H2 BWF sing 83 n n 
C7 H3 BWF sing 84 n n 
C7 H4 BWF sing 85 n n 
C8 H5 BWF sing 86 n n 
C8 H6 BWF sing 87 n n 
C9 H7 BWF sing 88 n n 
C9 H8 BWF sing 89 n n 
O11 H9 BWF sing 90 n n 
C12 H10 BWF sing 91 n n 
O16 H11 BWF sing 92 n n 
C1 O1 BWF sing 93 n n 
O1 H1 BWF sing 94 n n 
#
_atom_sites.entry_id                     6M06 
_atom_sites.fract_transf_matrix[1][1]    0.00862 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004027 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012016 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011428 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 BWF A 1 501 501 BWF 2f8 . 
D 2 BWF B 1 501 501 BWF 2f8 . 
E 3 HOH A 1 601 290 HOH HOH . 
E 3 HOH A 2 602 113 HOH HOH . 
E 3 HOH A 3 603 90 HOH HOH . 
E 3 HOH A 4 604 241 HOH HOH . 
E 3 HOH A 5 605 119 HOH HOH . 
E 3 HOH A 6 606 40 HOH HOH . 
E 3 HOH A 7 607 19 HOH HOH . 
E 3 HOH A 8 608 208 HOH HOH . 
E 3 HOH A 9 609 7 HOH HOH . 
E 3 HOH A 10 610 2 HOH HOH . 
E 3 HOH A 11 611 92 HOH HOH . 
E 3 HOH A 12 612 34 HOH HOH . 
E 3 HOH A 13 613 73 HOH HOH . 
E 3 HOH A 14 614 26 HOH HOH . 
E 3 HOH A 15 615 72 HOH HOH . 
E 3 HOH A 16 616 16 HOH HOH . 
E 3 HOH A 17 617 39 HOH HOH . 
E 3 HOH A 18 618 18 HOH HOH . 
E 3 HOH A 19 619 80 HOH HOH . 
E 3 HOH A 20 620 8 HOH HOH . 
E 3 HOH A 21 621 144 HOH HOH . 
E 3 HOH A 22 622 162 HOH HOH . 
E 3 HOH A 23 623 135 HOH HOH . 
E 3 HOH A 24 624 236 HOH HOH . 
E 3 HOH A 25 625 42 HOH HOH . 
E 3 HOH A 26 626 188 HOH HOH . 
E 3 HOH A 27 627 23 HOH HOH . 
E 3 HOH A 28 628 115 HOH HOH . 
E 3 HOH A 29 629 168 HOH HOH . 
E 3 HOH A 30 630 160 HOH HOH . 
E 3 HOH A 31 631 364 HOH HOH . 
E 3 HOH A 32 632 11 HOH HOH . 
E 3 HOH A 33 633 107 HOH HOH . 
E 3 HOH A 34 634 30 HOH HOH . 
E 3 HOH A 35 635 44 HOH HOH . 
E 3 HOH A 36 636 14 HOH HOH . 
E 3 HOH A 37 637 305 HOH HOH . 
E 3 HOH A 38 638 298 HOH HOH . 
E 3 HOH A 39 639 182 HOH HOH . 
E 3 HOH A 40 640 70 HOH HOH . 
E 3 HOH A 41 641 53 HOH HOH . 
E 3 HOH A 42 642 121 HOH HOH . 
E 3 HOH A 43 643 171 HOH HOH . 
E 3 HOH A 44 644 15 HOH HOH . 
E 3 HOH A 45 645 78 HOH HOH . 
E 3 HOH A 46 646 69 HOH HOH . 
E 3 HOH A 47 647 103 HOH HOH . 
E 3 HOH A 48 648 63 HOH HOH . 
E 3 HOH A 49 649 28 HOH HOH . 
E 3 HOH A 50 650 109 HOH HOH . 
E 3 HOH A 51 651 125 HOH HOH . 
E 3 HOH A 52 652 130 HOH HOH . 
E 3 HOH A 53 653 37 HOH HOH . 
E 3 HOH A 54 654 226 HOH HOH . 
E 3 HOH A 55 655 242 HOH HOH . 
E 3 HOH A 56 656 153 HOH HOH . 
E 3 HOH A 57 657 5 HOH HOH . 
E 3 HOH A 58 658 120 HOH HOH . 
E 3 HOH A 59 659 179 HOH HOH . 
E 3 HOH A 60 660 314 HOH HOH . 
E 3 HOH A 61 661 85 HOH HOH . 
E 3 HOH A 62 662 158 HOH HOH . 
E 3 HOH A 63 663 58 HOH HOH . 
E 3 HOH A 64 664 59 HOH HOH . 
E 3 HOH A 65 665 141 HOH HOH . 
E 3 HOH A 66 666 33 HOH HOH . 
E 3 HOH A 67 667 365 HOH HOH . 
E 3 HOH A 68 668 174 HOH HOH . 
E 3 HOH A 69 669 161 HOH HOH . 
E 3 HOH A 70 670 122 HOH HOH . 
E 3 HOH A 71 671 137 HOH HOH . 
E 3 HOH A 72 672 81 HOH HOH . 
E 3 HOH A 73 673 88 HOH HOH . 
E 3 HOH A 74 674 134 HOH HOH . 
E 3 HOH A 75 675 82 HOH HOH . 
E 3 HOH A 76 676 399 HOH HOH . 
E 3 HOH A 77 677 76 HOH HOH . 
E 3 HOH A 78 678 100 HOH HOH . 
E 3 HOH A 79 679 354 HOH HOH . 
E 3 HOH A 80 680 284 HOH HOH . 
E 3 HOH A 81 681 396 HOH HOH . 
E 3 HOH A 82 682 373 HOH HOH . 
E 3 HOH A 83 683 143 HOH HOH . 
E 3 HOH A 84 684 124 HOH HOH . 
E 3 HOH A 85 685 253 HOH HOH . 
E 3 HOH A 86 686 75 HOH HOH . 
E 3 HOH A 87 687 202 HOH HOH . 
E 3 HOH A 88 688 91 HOH HOH . 
F 3 HOH B 1 601 401 HOH HOH . 
F 3 HOH B 2 602 87 HOH HOH . 
F 3 HOH B 3 603 296 HOH HOH . 
F 3 HOH B 4 604 25 HOH HOH . 
F 3 HOH B 5 605 24 HOH HOH . 
F 3 HOH B 6 606 77 HOH HOH . 
F 3 HOH B 7 607 3 HOH HOH . 
F 3 HOH B 8 608 101 HOH HOH . 
F 3 HOH B 9 609 43 HOH HOH . 
F 3 HOH B 10 610 129 HOH HOH . 
F 3 HOH B 11 611 173 HOH HOH . 
F 3 HOH B 12 612 118 HOH HOH . 
F 3 HOH B 13 613 235 HOH HOH . 
F 3 HOH B 14 614 390 HOH HOH . 
F 3 HOH B 15 615 155 HOH HOH . 
F 3 HOH B 16 616 98 HOH HOH . 
F 3 HOH B 17 617 35 HOH HOH . 
F 3 HOH B 18 618 112 HOH HOH . 
F 3 HOH B 19 619 27 HOH HOH . 
F 3 HOH B 20 620 64 HOH HOH . 
F 3 HOH B 21 621 4 HOH HOH . 
F 3 HOH B 22 622 278 HOH HOH . 
F 3 HOH B 23 623 13 HOH HOH . 
F 3 HOH B 24 624 347 HOH HOH . 
F 3 HOH B 25 625 10 HOH HOH . 
F 3 HOH B 26 626 22 HOH HOH . 
F 3 HOH B 27 627 31 HOH HOH . 
F 3 HOH B 28 628 57 HOH HOH . 
F 3 HOH B 29 629 224 HOH HOH . 
F 3 HOH B 30 630 172 HOH HOH . 
F 3 HOH B 31 631 389 HOH HOH . 
F 3 HOH B 32 632 213 HOH HOH . 
F 3 HOH B 33 633 65 HOH HOH . 
F 3 HOH B 34 634 325 HOH HOH . 
F 3 HOH B 35 635 47 HOH HOH . 
F 3 HOH B 36 636 159 HOH HOH . 
F 3 HOH B 37 637 147 HOH HOH . 
F 3 HOH B 38 638 56 HOH HOH . 
F 3 HOH B 39 639 225 HOH HOH . 
F 3 HOH B 40 640 151 HOH HOH . 
F 3 HOH B 41 641 99 HOH HOH . 
F 3 HOH B 42 642 97 HOH HOH . 
F 3 HOH B 43 643 36 HOH HOH . 
F 3 HOH B 44 644 180 HOH HOH . 
F 3 HOH B 45 645 198 HOH HOH . 
F 3 HOH B 46 646 388 HOH HOH . 
F 3 HOH B 47 647 86 HOH HOH . 
F 3 HOH B 48 648 51 HOH HOH . 
F 3 HOH B 49 649 343 HOH HOH . 
F 3 HOH B 50 650 111 HOH HOH . 
F 3 HOH B 51 651 176 HOH HOH . 
F 3 HOH B 52 652 317 HOH HOH . 
F 3 HOH B 53 653 46 HOH HOH . 
F 3 HOH B 54 654 164 HOH HOH . 
F 3 HOH B 55 655 191 HOH HOH . 
F 3 HOH B 56 656 123 HOH HOH . 
F 3 HOH B 57 657 62 HOH HOH . 
F 3 HOH B 58 658 68 HOH HOH . 
F 3 HOH B 59 659 60 HOH HOH . 
F 3 HOH B 60 660 79 HOH HOH . 
F 3 HOH B 61 661 283 HOH HOH . 
F 3 HOH B 62 662 29 HOH HOH . 
F 3 HOH B 63 663 363 HOH HOH . 
F 3 HOH B 64 664 398 HOH HOH . 
F 3 HOH B 65 665 402 HOH HOH . 
F 3 HOH B 66 666 393 HOH HOH . 
F 3 HOH B 67 667 210 HOH HOH . 
F 3 HOH B 68 668 392 HOH HOH . 
F 3 HOH B 69 669 54 HOH HOH . 
F 3 HOH B 70 670 52 HOH HOH . 
F 3 HOH B 71 671 321 HOH HOH . 
F 3 HOH B 72 672 250 HOH HOH . 
F 3 HOH B 73 673 391 HOH HOH . 
F 3 HOH B 74 674 189 HOH HOH . 
F 3 HOH B 75 675 315 HOH HOH . 
F 3 HOH B 76 676 352 HOH HOH . 
F 3 HOH B 77 677 394 HOH HOH . 
F 3 HOH B 78 678 192 HOH HOH . 
F 3 HOH B 79 679 332 HOH HOH . 
F 3 HOH B 80 680 395 HOH HOH . 
F 3 HOH B 81 681 400 HOH HOH . 
F 3 HOH B 82 682 126 HOH HOH . 
F 3 HOH B 83 683 300 HOH HOH . 
F 3 HOH B 84 684 397 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BWF . . . D 2 148.757 44.822 107.888 1 29.32 ? C1 BWF 501 B 1 
HETATM 2 O O3 BWF . . . D 2 149.145 43.867 108.487 1 28.67 ? O3 BWF 501 B 1 
HETATM 3 N N5 BWF . . . D 2 148.015 45.684 108.445 1 30.48 ? N5 BWF 501 B 1 
HETATM 4 C C6 BWF . . . D 2 147.55 45.392 109.774 1 32.16 ? C6 BWF 501 B 1 
HETATM 5 C C7 BWF . . . D 2 147.246 46.791 110.312 1 32.59 ? C7 BWF 501 B 1 
HETATM 6 C C8 BWF . . . D 2 146.809 47.605 109.113 1 29.77 ? C8 BWF 501 B 1 
HETATM 7 C C9 BWF . . . D 2 147.506 46.937 107.901 1 30.96 ? C9 BWF 501 B 1 
HETATM 8 C C10 BWF . . . D 2 146.236 44.683 109.569 1 35.82 ? C10 BWF 501 B 1 
HETATM 9 O O11 BWF . . . D 2 145.374 44.723 110.542 1 32.95 ? O11 BWF 501 B 1 
HETATM 10 C C12 BWF . . . D 2 146.04 44.098 108.343 1 37.36 ? C12 BWF 501 B 1 
HETATM 11 C C13 BWF . . . D 2 144.784 43.569 108.048 1 47.93 ? C13 BWF 501 B 1 
HETATM 12 O O14 BWF . . . D 2 143.995 44.452 107.59 1 53.3 ? O14 BWF 501 B 1 
HETATM 13 O O16 BWF . . . D 2 144.404 42.44 108.472 1 49.45 ? O16 BWF 501 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           13 
#