data_6M07
#
_model_server_result.job_id            nrrkMn8kIQdjdVhC_B_zxg 
_model_server_result.datetime_utc      '2024-11-12 20:57:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m07 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    6M07 
#
_exptl.entry_id    6M07 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              631.606 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-[(E)-3-[2-(diethylamino)ethyl-[[4-[4-(trifluoromethyl)-2-[2,2,2-tris(fluoranyl)ethoxy]phenyl]phenyl]methyl]amino]-1-oxidanyl-3-oxidanylidene-prop-1-enyl]pyrrolidine-1-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.32 
_cell.angle_gamma         90 
_cell.entry_id            6M07 
_cell.length_a            112.687 
_cell.length_b            77.857 
_cell.length_c            94.698 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M07 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 220 A SER 273 1_555 C C1 BWO . A BWO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.513 ? 
covale ? covale2 B OG SER 220 B SER 273 1_555 D C1 BWO . B BWO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? 
#
_chem_comp.formula           'C30 H35 F6 N3 O5' 
_chem_comp.formula_weight    631.606 
_chem_comp.id                BWO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-[(E)-3-[2-(diethylamino)ethyl-[[4-[4-(trifluoromethyl)-2-[2,2,2-tris(fluoranyl)ethoxy]phenyl]phenyl]methyl]amino]-1-oxidanyl-3-oxidanylidene-prop-1-enyl]pyrrolidine-1-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C29 C28 BWO doub 70 n y 
C29 C24 BWO sing 71 n y 
C28 C27 BWO sing 72 n y 
F39 C36 BWO sing 73 n n 
C23 C24 BWO sing 74 n n 
C23 N13 BWO sing 75 n n 
C24 C25 BWO doub 76 n y 
C27 C30 BWO sing 77 n n 
C27 C26 BWO doub 78 n y 
C30 C35 BWO doub 79 n y 
C30 C31 BWO sing 80 n y 
O40 C31 BWO sing 81 n n 
O40 C41 BWO sing 82 n n 
C35 C34 BWO sing 83 n y 
C31 C32 BWO doub 84 n y 
C34 C33 BWO doub 85 n y 
F37 C36 BWO sing 86 n n 
F44 C42 BWO sing 87 n n 
C32 C33 BWO sing 88 n y 
C33 C36 BWO sing 89 n n 
C41 C42 BWO sing 90 n n 
C36 F38 BWO sing 91 n n 
F43 C42 BWO sing 92 n n 
C25 C26 BWO sing 93 n y 
C42 F46 BWO sing 94 n n 
N13 C12 BWO sing 95 n n 
N13 C15 BWO sing 96 n n 
C11 C12 BWO sing 97 n n 
C11 C8 BWO doub 98 e n 
C12 O14 BWO doub 99 n n 
O9 C8 BWO sing 100 n n 
C1 O2 BWO doub 101 n n 
C1 N3 BWO sing 102 n n 
C8 C4 BWO sing 103 n n 
N3 C4 BWO sing 104 n n 
N3 C7 BWO sing 105 n n 
C15 C16 BWO sing 106 n n 
C4 C5 BWO sing 107 n n 
C7 C6 BWO sing 108 n n 
C16 N17 BWO sing 109 n n 
C5 C6 BWO sing 110 n n 
C19 C18 BWO sing 111 n n 
N17 C18 BWO sing 112 n n 
N17 C21 BWO sing 113 n n 
C21 C22 BWO sing 114 n n 
C4 H2 BWO sing 115 n n 
C5 H3 BWO sing 116 n n 
C5 H4 BWO sing 117 n n 
C6 H5 BWO sing 118 n n 
C6 H6 BWO sing 119 n n 
C7 H7 BWO sing 120 n n 
C7 H8 BWO sing 121 n n 
O9 H9 BWO sing 122 n n 
C11 H10 BWO sing 123 n n 
C15 H11 BWO sing 124 n n 
C15 H12 BWO sing 125 n n 
C16 H13 BWO sing 126 n n 
C16 H14 BWO sing 127 n n 
C18 H16 BWO sing 128 n n 
C18 H17 BWO sing 129 n n 
C19 H18 BWO sing 130 n n 
C19 H19 BWO sing 131 n n 
C19 H20 BWO sing 132 n n 
C21 H21 BWO sing 133 n n 
C21 H22 BWO sing 134 n n 
C22 H23 BWO sing 135 n n 
C22 H24 BWO sing 136 n n 
C22 H25 BWO sing 137 n n 
C23 H26 BWO sing 138 n n 
C23 H27 BWO sing 139 n n 
C25 H28 BWO sing 140 n n 
C26 H29 BWO sing 141 n n 
C28 H30 BWO sing 142 n n 
C29 H31 BWO sing 143 n n 
C32 H32 BWO sing 144 n n 
C34 H33 BWO sing 145 n n 
C35 H34 BWO sing 146 n n 
C41 H35 BWO sing 147 n n 
C41 H36 BWO sing 148 n n 
C1 O1 BWO sing 149 n n 
O1 H1 BWO sing 150 n n 
#
_atom_sites.entry_id                     6M07 
_atom_sites.fract_transf_matrix[1][1]    0.008874 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004199 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012844 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011682 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 BWO A 1 501 501 BWO 2g2 . 
D 2 BWO B 1 501 501 BWO 2g2 . 
E 3 HOH A 1 601 29 HOH HOH . 
E 3 HOH A 2 602 4 HOH HOH . 
E 3 HOH A 3 603 23 HOH HOH . 
E 3 HOH A 4 604 28 HOH HOH . 
F 3 HOH B 1 601 15 HOH HOH . 
F 3 HOH B 2 602 32 HOH HOH . 
F 3 HOH B 3 603 24 HOH HOH . 
F 3 HOH B 4 604 27 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BWO . . . D 2 63.155 -27.093 23.539 1 61.74 ? C1 BWO 501 B 1 
HETATM 2 O O2 BWO . . . D 2 62.688 -26.605 24.574 1 51.57 ? O2 BWO 501 B 1 
HETATM 3 N N3 BWO . . . D 2 63.761 -28.241 23.555 1 80.18 ? N3 BWO 501 B 1 
HETATM 4 C C4 BWO . . . D 2 64.498 -28.755 24.687 1 84.89 ? C4 BWO 501 B 1 
HETATM 5 C C5 BWO . . . D 2 64.156 -30.225 24.553 1 83.4 ? C5 BWO 501 B 1 
HETATM 6 C C6 BWO . . . D 2 64.027 -30.491 23.063 1 83.22 ? C6 BWO 501 B 1 
HETATM 7 C C7 BWO . . . D 2 63.725 -29.152 22.426 1 84.75 ? C7 BWO 501 B 1 
HETATM 8 C C8 BWO . . . D 2 65.975 -28.686 24.674 1 90.72 ? C8 BWO 501 B 1 
HETATM 9 O O9 BWO . . . D 2 66.706 -29.293 23.744 1 113.06 ? O9 BWO 501 B 1 
HETATM 10 C C11 BWO . . . D 2 66.5 -28.105 25.724 1 86.97 ? C11 BWO 501 B 1 
HETATM 11 C C12 BWO . . . D 2 67.935 -27.879 25.804 1 88.06 ? C12 BWO 501 B 1 
HETATM 12 N N13 BWO . . . D 2 68.928 -28.642 25.239 1 79.76 ? N13 BWO 501 B 1 
HETATM 13 O O14 BWO . . . D 2 68.145 -26.858 26.429 1 105.47 ? O14 BWO 501 B 1 
HETATM 14 C C15 BWO . . . D 2 68.918 -30.12 25.136 1 76.77 ? C15 BWO 501 B 1 
HETATM 15 C C16 BWO . . . D 2 69.812 -30.71 26.258 1 76.54 ? C16 BWO 501 B 1 
HETATM 16 N N17 BWO . . . D 2 69.079 -30.856 27.565 1 75.41 ? N17 BWO 501 B 1 
HETATM 17 C C18 BWO . . . D 2 68.422 -32.196 27.691 1 74.38 ? C18 BWO 501 B 1 
HETATM 18 C C19 BWO . . . D 2 66.939 -32.146 28.032 1 69.5 ? C19 BWO 501 B 1 
HETATM 19 C C21 BWO . . . D 2 69.953 -30.566 28.743 1 70.04 ? C21 BWO 501 B 1 
HETATM 20 C C22 BWO . . . D 2 69.118 -30.227 29.966 1 66.31 ? C22 BWO 501 B 1 
HETATM 21 C C23 BWO . . . D 2 70.203 -28.043 24.831 1 73.56 ? C23 BWO 501 B 1 
HETATM 22 C C24 BWO . . . D 2 70.748 -27.215 25.991 1 76.35 ? C24 BWO 501 B 1 
HETATM 23 C C25 BWO . . . D 2 70.308 -27.393 27.319 1 79.43 ? C25 BWO 501 B 1 
HETATM 24 C C26 BWO . . . D 2 70.777 -26.62 28.374 1 79.56 ? C26 BWO 501 B 1 
HETATM 25 C C27 BWO . . . D 2 71.726 -25.631 28.136 1 81.81 ? C27 BWO 501 B 1 
HETATM 26 C C28 BWO . . . D 2 72.193 -25.46 26.826 1 80.8 ? C28 BWO 501 B 1 
HETATM 27 C C29 BWO . . . D 2 71.702 -26.235 25.761 1 81.73 ? C29 BWO 501 B 1 
HETATM 28 C C30 BWO . . . D 2 72.239 -24.792 29.28 1 86.01 ? C30 BWO 501 B 1 
HETATM 29 C C31 BWO . . . D 2 71.519 -23.716 29.876 1 81.77 ? C31 BWO 501 B 1 
HETATM 30 C C32 BWO . . . D 2 72.073 -22.984 30.942 1 77.67 ? C32 BWO 501 B 1 
HETATM 31 C C33 BWO . . . D 2 73.344 -23.303 31.438 1 76.58 ? C33 BWO 501 B 1 
HETATM 32 C C34 BWO . . . D 2 74.051 -24.362 30.846 1 81.99 ? C34 BWO 501 B 1 
HETATM 33 C C35 BWO . . . D 2 73.505 -25.095 29.784 1 83.5 ? C35 BWO 501 B 1 
HETATM 34 C C36 BWO . . . D 2 73.965 -22.525 32.58 1 68.38 ? C36 BWO 501 B 1 
HETATM 35 F F37 BWO . . . D 2 73.067 -21.955 33.369 1 68.03 ? F37 BWO 501 B 1 
HETATM 36 F F38 BWO . . . D 2 74.766 -23.279 33.283 1 66.51 ? F38 BWO 501 B 1 
HETATM 37 F F39 BWO . . . D 2 74.761 -21.61 32.123 1 64.71 ? F39 BWO 501 B 1 
HETATM 38 O O40 BWO . . . D 2 70.274 -23.326 29.458 1 79.39 ? O40 BWO 501 B 1 
HETATM 39 C C41 BWO . . . D 2 69.179 -23.343 30.38 1 86.78 ? C41 BWO 501 B 1 
HETATM 40 C C42 BWO . . . D 2 67.914 -22.726 29.785 1 88.05 ? C42 BWO 501 B 1 
HETATM 41 F F43 BWO . . . D 2 68.223 -21.695 28.995 1 84.35 ? F43 BWO 501 B 1 
HETATM 42 F F44 BWO . . . D 2 67.197 -22.372 30.83 1 81.38 ? F44 BWO 501 B 1 
HETATM 43 F F46 BWO . . . D 2 67.193 -23.605 29.1 1 97.28 ? F46 BWO 501 B 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#