data_6M0F # _model_server_result.job_id SdWkOZ-82SJXwCfLJntcHg _model_server_result.datetime_utc '2024-10-14 03:16:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m0f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":604}' # _entry.id 6M0F # _exptl.entry_id 6M0F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.227 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M0F _cell.length_a 97.978 _cell.length_b 133.472 _cell.length_c 162.088 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M0F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O GLY 18 A GLY 42 1_555 I NA NA . A NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.098 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 I NA NA . A NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc4 A OD1 ASP 22 A ASP 46 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc5 A OD1 ASN 25 A ASN 49 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? metalc ? metalc6 A O SER 255 A SER 320 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc7 A OG SER 255 A SER 320 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.847 ? metalc ? metalc8 A OD1 ASP 355 A ASP 420 1_555 I NA NA . A NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc9 A OD2 ASP 355 A ASP 420 1_555 I NA NA . A NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? # _chem_comp.formula 'C8 H18 O3' _chem_comp.formula_weight 162.227 _chem_comp.id P4G _chem_comp.mon_nstd_flag . _chem_comp.name 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 P4G sing 314 n n C8 H81 P4G sing 315 n n C8 H82 P4G sing 316 n n C8 H83 P4G sing 317 n n C7 O4 P4G sing 318 n n C7 H71 P4G sing 319 n n C7 H72 P4G sing 320 n n O4 C6 P4G sing 321 n n C6 C5 P4G sing 322 n n C6 H61 P4G sing 323 n n C6 H62 P4G sing 324 n n C5 O3 P4G sing 325 n n C5 H51 P4G sing 326 n n C5 H52 P4G sing 327 n n O3 C4 P4G sing 328 n n C4 C3 P4G sing 329 n n C4 H41 P4G sing 330 n n C4 H42 P4G sing 331 n n C3 O2 P4G sing 332 n n C3 H31 P4G sing 333 n n C3 H32 P4G sing 334 n n O2 C2 P4G sing 335 n n C2 C1 P4G sing 336 n n C2 H21 P4G sing 337 n n C2 H22 P4G sing 338 n n C1 H11 P4G sing 339 n n C1 H12 P4G sing 340 n n C1 H13 P4G sing 341 n n # _atom_sites.entry_id 6M0F _atom_sites.fract_transf_matrix[1][1] 0.010206 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006169 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CL A 1 601 1 CL CL . E 5 CLR A 1 602 2 CLR CLR . F 5 CLR A 1 603 1 CLR CLR . G 6 P4G A 1 604 1 P4G P4G . H 7 NA A 1 605 1 NA NA . I 7 NA A 1 606 2 NA NA . J 8 HOH A 1 701 3 HOH HOH . J 8 HOH A 2 702 1 HOH HOH . J 8 HOH A 3 703 2 HOH HOH . K 8 HOH L 1 301 4 HOH HOH . K 8 HOH L 2 302 6 HOH HOH . L 8 HOH H 1 301 8 HOH HOH . L 8 HOH H 2 302 7 HOH HOH . L 8 HOH H 3 303 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 P4G . . . G 6 5.494 -10.339 25.116 1 94.11 ? C8 P4G 604 A 1 HETATM 2 C C7 P4G . . . G 6 5.514 -8.903 24.598 1 106.22 ? C7 P4G 604 A 1 HETATM 3 O O4 P4G . . . G 6 6.819 -8.403 24.685 1 131.31 ? O4 P4G 604 A 1 HETATM 4 C C6 P4G . . . G 6 7.304 -8.27 25.992 1 128.78 ? C6 P4G 604 A 1 HETATM 5 C C5 P4G . . . G 6 8.828 -8.174 25.931 1 128.98 ? C5 P4G 604 A 1 HETATM 6 O O3 P4G . . . G 6 9.372 -8.983 26.935 1 135.35 ? O3 P4G 604 A 1 HETATM 7 C C4 P4G . . . G 6 10.706 -9.343 26.708 1 129.72 ? C4 P4G 604 A 1 HETATM 8 C C3 P4G . . . G 6 11.359 -9.702 28.043 1 119.49 ? C3 P4G 604 A 1 HETATM 9 O O2 P4G . . . G 6 10.636 -10.741 28.64 1 129.29 ? O2 P4G 604 A 1 HETATM 10 C C2 P4G . . . G 6 10.836 -10.849 30.021 1 110.29 ? C2 P4G 604 A 1 HETATM 11 C C1 P4G . . . G 6 9.756 -11.755 30.61 1 98.59 ? C1 P4G 604 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #