data_6M0K # _model_server_result.job_id twJ7avkCnqPSASjOi0Mu5w _model_server_result.datetime_utc '2024-11-16 11:01:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6M0K # _exptl.entry_id 6M0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.69 _cell.angle_gamma 90 _cell.entry_id 6M0K _cell.length_a 98.152 _cell.length_b 81.701 _cell.length_c 51.669 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -43.165161 0 93.890953 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id C32 _struct_conn.ptnr2_label_comp_id FJC _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FJC _struct_conn.ptnr2_auth_seq_id 405 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.811 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6M0K _atom_sites.fract_transf_matrix[1][1] 0.010188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004684 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01224 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1 DMS DMS . C 2 DMS A 1 402 2 DMS DMS . D 2 DMS A 1 403 3 DMS DMS . E 2 DMS A 1 404 4 DMS DMS . F 3 FJC A 1 405 1 FJC LIG . G 4 HOH A 1 501 220 HOH HOH . G 4 HOH A 2 502 68 HOH HOH . G 4 HOH A 3 503 151 HOH HOH . G 4 HOH A 4 504 75 HOH HOH . G 4 HOH A 5 505 163 HOH HOH . G 4 HOH A 6 506 77 HOH HOH . G 4 HOH A 7 507 309 HOH HOH . G 4 HOH A 8 508 79 HOH HOH . G 4 HOH A 9 509 111 HOH HOH . G 4 HOH A 10 510 12 HOH HOH . G 4 HOH A 11 511 129 HOH HOH . G 4 HOH A 12 512 135 HOH HOH . G 4 HOH A 13 513 298 HOH HOH . G 4 HOH A 14 514 234 HOH HOH . G 4 HOH A 15 515 209 HOH HOH . G 4 HOH A 16 516 312 HOH HOH . G 4 HOH A 17 517 98 HOH HOH . G 4 HOH A 18 518 306 HOH HOH . G 4 HOH A 19 519 28 HOH HOH . G 4 HOH A 20 520 22 HOH HOH . G 4 HOH A 21 521 76 HOH HOH . G 4 HOH A 22 522 47 HOH HOH . G 4 HOH A 23 523 179 HOH HOH . G 4 HOH A 24 524 32 HOH HOH . G 4 HOH A 25 525 100 HOH HOH . G 4 HOH A 26 526 17 HOH HOH . G 4 HOH A 27 527 103 HOH HOH . G 4 HOH A 28 528 153 HOH HOH . G 4 HOH A 29 529 37 HOH HOH . G 4 HOH A 30 530 84 HOH HOH . G 4 HOH A 31 531 168 HOH HOH . G 4 HOH A 32 532 310 HOH HOH . G 4 HOH A 33 533 146 HOH HOH . G 4 HOH A 34 534 45 HOH HOH . G 4 HOH A 35 535 236 HOH HOH . G 4 HOH A 36 536 295 HOH HOH . G 4 HOH A 37 537 59 HOH HOH . G 4 HOH A 38 538 95 HOH HOH . G 4 HOH A 39 539 19 HOH HOH . G 4 HOH A 40 540 90 HOH HOH . G 4 HOH A 41 541 161 HOH HOH . G 4 HOH A 42 542 7 HOH HOH . G 4 HOH A 43 543 6 HOH HOH . G 4 HOH A 44 544 136 HOH HOH . G 4 HOH A 45 545 53 HOH HOH . G 4 HOH A 46 546 149 HOH HOH . G 4 HOH A 47 547 97 HOH HOH . G 4 HOH A 48 548 197 HOH HOH . G 4 HOH A 49 549 36 HOH HOH . G 4 HOH A 50 550 157 HOH HOH . G 4 HOH A 51 551 91 HOH HOH . G 4 HOH A 52 552 171 HOH HOH . G 4 HOH A 53 553 249 HOH HOH . G 4 HOH A 54 554 31 HOH HOH . G 4 HOH A 55 555 63 HOH HOH . G 4 HOH A 56 556 60 HOH HOH . G 4 HOH A 57 557 30 HOH HOH . G 4 HOH A 58 558 82 HOH HOH . G 4 HOH A 59 559 61 HOH HOH . G 4 HOH A 60 560 121 HOH HOH . G 4 HOH A 61 561 152 HOH HOH . G 4 HOH A 62 562 184 HOH HOH . G 4 HOH A 63 563 2 HOH HOH . G 4 HOH A 64 564 101 HOH HOH . G 4 HOH A 65 565 158 HOH HOH . G 4 HOH A 66 566 69 HOH HOH . G 4 HOH A 67 567 3 HOH HOH . G 4 HOH A 68 568 105 HOH HOH . G 4 HOH A 69 569 1 HOH HOH . G 4 HOH A 70 570 25 HOH HOH . G 4 HOH A 71 571 35 HOH HOH . G 4 HOH A 72 572 33 HOH HOH . G 4 HOH A 73 573 78 HOH HOH . G 4 HOH A 74 574 52 HOH HOH . G 4 HOH A 75 575 303 HOH HOH . G 4 HOH A 76 576 176 HOH HOH . G 4 HOH A 77 577 122 HOH HOH . G 4 HOH A 78 578 62 HOH HOH . G 4 HOH A 79 579 80 HOH HOH . G 4 HOH A 80 580 42 HOH HOH . G 4 HOH A 81 581 14 HOH HOH . G 4 HOH A 82 582 81 HOH HOH . G 4 HOH A 83 583 154 HOH HOH . G 4 HOH A 84 584 26 HOH HOH . G 4 HOH A 85 585 271 HOH HOH . G 4 HOH A 86 586 302 HOH HOH . G 4 HOH A 87 587 311 HOH HOH . G 4 HOH A 88 588 18 HOH HOH . G 4 HOH A 89 589 74 HOH HOH . G 4 HOH A 90 590 20 HOH HOH . G 4 HOH A 91 591 51 HOH HOH . G 4 HOH A 92 592 5 HOH HOH . G 4 HOH A 93 593 92 HOH HOH . G 4 HOH A 94 594 173 HOH HOH . G 4 HOH A 95 595 292 HOH HOH . G 4 HOH A 96 596 10 HOH HOH . G 4 HOH A 97 597 15 HOH HOH . G 4 HOH A 98 598 286 HOH HOH . G 4 HOH A 99 599 23 HOH HOH . G 4 HOH A 100 600 4 HOH HOH . G 4 HOH A 101 601 8 HOH HOH . G 4 HOH A 102 602 93 HOH HOH . G 4 HOH A 103 603 307 HOH HOH . G 4 HOH A 104 604 38 HOH HOH . G 4 HOH A 105 605 21 HOH HOH . G 4 HOH A 106 606 99 HOH HOH . G 4 HOH A 107 607 88 HOH HOH . G 4 HOH A 108 608 299 HOH HOH . G 4 HOH A 109 609 72 HOH HOH . G 4 HOH A 110 610 48 HOH HOH . G 4 HOH A 111 611 126 HOH HOH . G 4 HOH A 112 612 300 HOH HOH . G 4 HOH A 113 613 113 HOH HOH . G 4 HOH A 114 614 16 HOH HOH . G 4 HOH A 115 615 64 HOH HOH . G 4 HOH A 116 616 227 HOH HOH . G 4 HOH A 117 617 142 HOH HOH . G 4 HOH A 118 618 128 HOH HOH . G 4 HOH A 119 619 221 HOH HOH . G 4 HOH A 120 620 34 HOH HOH . G 4 HOH A 121 621 139 HOH HOH . G 4 HOH A 122 622 104 HOH HOH . G 4 HOH A 123 623 290 HOH HOH . G 4 HOH A 124 624 9 HOH HOH . G 4 HOH A 125 625 169 HOH HOH . G 4 HOH A 126 626 215 HOH HOH . G 4 HOH A 127 627 287 HOH HOH . G 4 HOH A 128 628 297 HOH HOH . G 4 HOH A 129 629 11 HOH HOH . G 4 HOH A 130 630 109 HOH HOH . G 4 HOH A 131 631 124 HOH HOH . G 4 HOH A 132 632 193 HOH HOH . G 4 HOH A 133 633 238 HOH HOH . G 4 HOH A 134 634 13 HOH HOH . G 4 HOH A 135 635 133 HOH HOH . G 4 HOH A 136 636 119 HOH HOH . G 4 HOH A 137 637 145 HOH HOH . G 4 HOH A 138 638 125 HOH HOH . G 4 HOH A 139 639 116 HOH HOH . G 4 HOH A 140 640 270 HOH HOH . G 4 HOH A 141 641 195 HOH HOH . G 4 HOH A 142 642 211 HOH HOH . G 4 HOH A 143 643 296 HOH HOH . G 4 HOH A 144 644 304 HOH HOH . G 4 HOH A 145 645 110 HOH HOH . G 4 HOH A 146 646 144 HOH HOH . G 4 HOH A 147 647 114 HOH HOH . G 4 HOH A 148 648 156 HOH HOH . G 4 HOH A 149 649 141 HOH HOH . G 4 HOH A 150 650 189 HOH HOH . G 4 HOH A 151 651 191 HOH HOH . G 4 HOH A 152 652 143 HOH HOH . G 4 HOH A 153 653 308 HOH HOH . G 4 HOH A 154 654 194 HOH HOH . G 4 HOH A 155 655 185 HOH HOH . G 4 HOH A 156 656 301 HOH HOH . G 4 HOH A 157 657 83 HOH HOH . G 4 HOH A 158 658 182 HOH HOH . G 4 HOH A 159 659 117 HOH HOH . G 4 HOH A 160 660 140 HOH HOH . G 4 HOH A 161 661 223 HOH HOH . G 4 HOH A 162 662 40 HOH HOH . G 4 HOH A 163 663 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 2 -13.216 7.893 73.071 1 79.47 ? S DMS 402 A 1 HETATM 2 O O DMS . . . C 2 -14.038 7.962 74.319 1 77.56 ? O DMS 402 A 1 HETATM 3 C C1 DMS . . . C 2 -13.212 9.492 72.219 1 79.74 ? C1 DMS 402 A 1 HETATM 4 C C2 DMS . . . C 2 -14.054 6.965 71.752 1 79.25 ? C2 DMS 402 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #