data_6M0Z
#
_model_server_result.job_id            kPGIZ2MjaNcIezI0WbKNhA 
_model_server_result.datetime_utc      '2024-11-24 06:53:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m0z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":702}' 
#
_entry.id    6M0Z 
#
_exptl.entry_id    6M0Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6M0Z 
_cell.length_a            97.292 
_cell.length_b            142.801 
_cell.length_c            168.35 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M0Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A O GLY 18 A GLY 42 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc2 A O ALA 20 A ALA 44 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc3 A O VAL 21 A VAL 45 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? 
metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc5 A O SER 255 A SER 320 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? 
metalc ? metalc6 A OG SER 255 A SER 320 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc7 A O LEU 352 A LEU 417 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc8 A OG SER 356 A SER 421 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? 
metalc ? metalc9 G NA NA . A NA 704 1_555 K O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 552 n n 
CBA CAB Y01 sing 553 n n 
CBA CAN Y01 sing 554 n n 
CAN CAJ Y01 sing 555 n n 
CAJ CAO Y01 sing 556 n n 
CAO CBB Y01 sing 557 n n 
CBB CAC Y01 sing 558 n n 
CBB CBE Y01 sing 559 n n 
CBE CAP Y01 sing 560 n n 
CBE CBI Y01 sing 561 n n 
CAP CAQ Y01 sing 562 n n 
CAQ CBG Y01 sing 563 n n 
CBG CBI Y01 sing 564 n n 
CBG CBD Y01 sing 565 n n 
CBI CAE Y01 sing 566 n n 
CBI CAU Y01 sing 567 n n 
CAU CAS Y01 sing 568 n n 
CAS CBF Y01 sing 569 n n 
CBF CBD Y01 sing 570 n n 
CBF CBH Y01 sing 571 n n 
CBD CAK Y01 sing 572 n n 
CAK CAI Y01 sing 573 n n 
CAI CAZ Y01 doub 574 n n 
CAZ CAV Y01 sing 575 n n 
CAZ CBH Y01 sing 576 n n 
CAV CBC Y01 sing 577 n n 
CBH CAD Y01 sing 578 n n 
CBH CAT Y01 sing 579 n n 
CAT CAR Y01 sing 580 n n 
CAR CBC Y01 sing 581 n n 
CBC OAW Y01 sing 582 n n 
OAW CAY Y01 sing 583 n n 
CAY OAG Y01 doub 584 n n 
CAY CAM Y01 sing 585 n n 
CAM CAL Y01 sing 586 n n 
CAL CAX Y01 sing 587 n n 
CAX OAH Y01 sing 588 n n 
CAX OAF Y01 doub 589 n n 
CAA HAA1 Y01 sing 590 n n 
CAA HAA2 Y01 sing 591 n n 
CAA HAA3 Y01 sing 592 n n 
CBA HBA Y01 sing 593 n n 
CAB HAB1 Y01 sing 594 n n 
CAB HAB2 Y01 sing 595 n n 
CAB HAB3 Y01 sing 596 n n 
CAN HAN1 Y01 sing 597 n n 
CAN HAN2 Y01 sing 598 n n 
CAJ HAJ1 Y01 sing 599 n n 
CAJ HAJ2 Y01 sing 600 n n 
CAO HAO1 Y01 sing 601 n n 
CAO HAO2 Y01 sing 602 n n 
CBB HBB Y01 sing 603 n n 
CAC HAC1 Y01 sing 604 n n 
CAC HAC2 Y01 sing 605 n n 
CAC HAC3 Y01 sing 606 n n 
CBE HBE Y01 sing 607 n n 
CAP HAP1 Y01 sing 608 n n 
CAP HAP2 Y01 sing 609 n n 
CAQ HAQ1 Y01 sing 610 n n 
CAQ HAQ2 Y01 sing 611 n n 
CBG HBG Y01 sing 612 n n 
CBD HBD Y01 sing 613 n n 
CAE HAE1 Y01 sing 614 n n 
CAE HAE2 Y01 sing 615 n n 
CAE HAE3 Y01 sing 616 n n 
CAU HAU1 Y01 sing 617 n n 
CAU HAU2 Y01 sing 618 n n 
CAS HAS1 Y01 sing 619 n n 
CAS HAS2 Y01 sing 620 n n 
CBF HBF Y01 sing 621 n n 
CAK HAK1 Y01 sing 622 n n 
CAK HAK2 Y01 sing 623 n n 
CAI HAI Y01 sing 624 n n 
CAV HAV1 Y01 sing 625 n n 
CAV HAV2 Y01 sing 626 n n 
CBC HBC Y01 sing 627 n n 
CAD HAD1 Y01 sing 628 n n 
CAD HAD2 Y01 sing 629 n n 
CAD HAD3 Y01 sing 630 n n 
CAT HAT1 Y01 sing 631 n n 
CAT HAT2 Y01 sing 632 n n 
CAR HAR1 Y01 sing 633 n n 
CAR HAR2 Y01 sing 634 n n 
CAM HAM1 Y01 sing 635 n n 
CAM HAM2 Y01 sing 636 n n 
CAL HAL1 Y01 sing 637 n n 
CAL HAL2 Y01 sing 638 n n 
OAH HAH Y01 sing 639 n n 
#
_atom_sites.entry_id                     6M0Z 
_atom_sites.fract_transf_matrix[1][1]    0.010278 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007003 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00594 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CLR A 1 701 1 CLR CLR . 
E 5 Y01 A 1 702 1 Y01 Y01 . 
F 6 DMU A 1 703 1 DMU DMU . 
G 7 NA A 1 704 1 NA NA . 
H 7 NA A 1 705 2 NA NA . 
I 8 CL A 1 706 3 CL CL . 
J 9 LNR A 1 707 1 LNR LNR . 
K 10 HOH A 1 801 2 HOH HOH . 
K 10 HOH A 2 802 1 HOH HOH . 
K 10 HOH A 3 803 4 HOH HOH . 
K 10 HOH A 4 804 2 HOH HOH . 
K 10 HOH A 5 805 1 HOH HOH . 
K 10 HOH A 6 806 3 HOH HOH . 
L 10 HOH L 1 301 8 HOH HOH . 
L 10 HOH L 2 302 6 HOH HOH . 
L 10 HOH L 3 303 11 HOH HOH . 
L 10 HOH L 4 304 5 HOH HOH . 
L 10 HOH L 5 305 3 HOH HOH . 
L 10 HOH L 6 306 4 HOH HOH . 
L 10 HOH L 7 307 8 HOH HOH . 
L 10 HOH L 8 308 9 HOH HOH . 
L 10 HOH L 9 309 11 HOH HOH . 
L 10 HOH L 10 310 7 HOH HOH . 
L 10 HOH L 11 311 10 HOH HOH . 
M 10 HOH H 1 301 10 HOH HOH . 
M 10 HOH H 2 302 24 HOH HOH . 
M 10 HOH H 3 303 13 HOH HOH . 
M 10 HOH H 4 304 17 HOH HOH . 
M 10 HOH H 5 305 23 HOH HOH . 
M 10 HOH H 6 306 18 HOH HOH . 
M 10 HOH H 7 307 21 HOH HOH . 
M 10 HOH H 8 308 12 HOH HOH . 
M 10 HOH H 9 309 22 HOH HOH . 
M 10 HOH H 10 310 19 HOH HOH . 
M 10 HOH H 11 311 6 HOH HOH . 
M 10 HOH H 12 312 14 HOH HOH . 
M 10 HOH H 13 313 12 HOH HOH . 
M 10 HOH H 14 314 16 HOH HOH . 
M 10 HOH H 15 315 20 HOH HOH . 
M 10 HOH H 16 316 7 HOH HOH . 
M 10 HOH H 17 317 5 HOH HOH . 
M 10 HOH H 18 318 15 HOH HOH . 
M 10 HOH H 19 319 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . E 5 8.67 -1.511 -39.508 1 95.86 ? CAA Y01 702 A 1 
HETATM 2 C CBA Y01 . . . E 5 7.601 -0.47 -39.843 1 101.71 ? CBA Y01 702 A 1 
HETATM 3 C CAB Y01 . . . E 5 8.267 0.884 -40.096 1 93.95 ? CAB Y01 702 A 1 
HETATM 4 C CAN Y01 . . . E 5 6.847 -0.913 -41.096 1 93.3 ? CAN Y01 702 A 1 
HETATM 5 C CAJ Y01 . . . E 5 6.392 0.317 -41.884 1 94.58 ? CAJ Y01 702 A 1 
HETATM 6 C CAO Y01 . . . E 5 5.819 -0.165 -43.217 1 98.87 ? CAO Y01 702 A 1 
HETATM 7 C CBB Y01 . . . E 5 4.842 0.861 -43.795 1 102.14 ? CBB Y01 702 A 1 
HETATM 8 C CAC Y01 . . . E 5 5.097 2.24 -43.184 1 97.16 ? CAC Y01 702 A 1 
HETATM 9 C CBE Y01 . . . E 5 5.094 0.915 -45.3 1 104.49 ? CBE Y01 702 A 1 
HETATM 10 C CAP Y01 . . . E 5 5.322 -0.524 -45.83 1 102.25 ? CAP Y01 702 A 1 
HETATM 11 C CAQ Y01 . . . E 5 4.466 -0.635 -47.122 1 106.42 ? CAQ Y01 702 A 1 
HETATM 12 C CBG Y01 . . . E 5 4.218 0.837 -47.477 1 105.48 ? CBG Y01 702 A 1 
HETATM 13 C CBI Y01 . . . E 5 3.882 1.418 -46.074 1 101.35 ? CBI Y01 702 A 1 
HETATM 14 C CAE Y01 . . . E 5 2.598 0.792 -45.522 1 95.6 ? CAE Y01 702 A 1 
HETATM 15 C CAU Y01 . . . E 5 3.727 2.923 -46.177 1 96.76 ? CAU Y01 702 A 1 
HETATM 16 C CAS Y01 . . . E 5 2.594 3.214 -47.17 1 97.99 ? CAS Y01 702 A 1 
HETATM 17 C CBF Y01 . . . E 5 2.913 2.612 -48.532 1 104.95 ? CBF Y01 702 A 1 
HETATM 18 C CBD Y01 . . . E 5 3.08 1.094 -48.442 1 104.5 ? CBD Y01 702 A 1 
HETATM 19 C CAK Y01 . . . E 5 3.522 0.561 -49.814 1 106.94 ? CAK Y01 702 A 1 
HETATM 20 C CAI Y01 . . . E 5 2.644 1.092 -50.91 1 113.79 ? CAI Y01 702 A 1 
HETATM 21 C CAZ Y01 . . . E 5 1.969 2.2 -50.814 1 112.12 ? CAZ Y01 702 A 1 
HETATM 22 C CAV Y01 . . . E 5 1.019 2.551 -51.944 1 108.68 ? CAV Y01 702 A 1 
HETATM 23 C CBH Y01 . . . E 5 1.832 2.967 -49.535 1 106.3 ? CBH Y01 702 A 1 
HETATM 24 C CAD Y01 . . . E 5 0.472 2.627 -48.924 1 100.6 ? CAD Y01 702 A 1 
HETATM 25 C CAT Y01 . . . E 5 1.857 4.468 -49.831 1 106.13 ? CAT Y01 702 A 1 
HETATM 26 C CAR Y01 . . . E 5 0.78 4.803 -50.867 1 108 ? CAR Y01 702 A 1 
HETATM 27 C CBC Y01 . . . E 5 1.05 4.063 -52.179 1 110.54 ? CBC Y01 702 A 1 
HETATM 28 O OAW Y01 . . . E 5 0.008 4.392 -53.132 1 117.73 ? OAW Y01 702 A 1 
HETATM 29 C CAY Y01 . . . E 5 0.325 5.24 -54.122 1 128.26 ? CAY Y01 702 A 1 
HETATM 30 O OAG Y01 . . . E 5 0.41 4.832 -55.257 1 130.84 ? OAG Y01 702 A 1 
HETATM 31 C CAM Y01 . . . E 5 0.572 6.697 -53.823 1 125.09 ? CAM Y01 702 A 1 
HETATM 32 C CAL Y01 . . . E 5 0.135 7.553 -55.015 1 127 ? CAL Y01 702 A 1 
HETATM 33 C CAX Y01 . . . E 5 -1.348 7.399 -55.249 1 127.96 ? CAX Y01 702 A 1 
HETATM 34 O OAH Y01 . . . E 5 -1.846 6.231 -55.688 1 121.95 ? OAH Y01 702 A 1 
HETATM 35 O OAF Y01 . . . E 5 -2.088 8.333 -55.038 1 114.98 ? OAF Y01 702 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           35 
#