data_6M13 # _model_server_result.job_id q-RbON1VvxlAKL4hwa9CGA _model_server_result.datetime_utc '2024-11-24 14:28:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m13 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 6M13 # _exptl.entry_id 6M13 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 396.458 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-(2-pyrrolidin-1-ylethyl)-1H-pyrrole-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M13 _cell.length_a 59.45 _cell.length_b 111.36 _cell.length_c 263.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M13 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C22 H25 F N4 O2' _chem_comp.formula_weight 396.458 _chem_comp.id BWC _chem_comp.mon_nstd_flag . _chem_comp.name 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-(2-pyrrolidin-1-ylethyl)-1H-pyrrole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBA CBB BWC sing 193 n n CBA CAZ BWC sing 194 n n CBB CBC BWC sing 195 n n CAZ NAY BWC sing 196 n n OAU CAT BWC doub 197 n n NAY CBC BWC sing 198 n n NAY CAX BWC sing 199 n n CAS CAO BWC sing 200 n n CAT CAP BWC sing 201 n n CAT NAV BWC sing 202 n n CAO CAP BWC doub 203 n y CAO NAN BWC sing 204 n y CAP CAQ BWC sing 205 n y NAN CAM BWC sing 206 n y CAX CAW BWC sing 207 n n CAQ CAM BWC doub 208 n y CAQ CAR BWC sing 209 n n CAM CAL BWC sing 210 n n OAK CAI BWC doub 211 n n NAV CAW BWC sing 212 n n CAL CAJ BWC doub 213 z n CAI CAJ BWC sing 214 n n CAI NAH BWC sing 215 n n CAJ CAE BWC sing 216 n n NAH CAD BWC sing 217 n n CAE CAD BWC doub 218 n y CAE CAF BWC sing 219 n y CAD CAC BWC sing 220 n y CAF CAA BWC doub 221 n y CAC CAB BWC doub 222 n y CAA CAB BWC sing 223 n y CAA FAG BWC sing 224 n n NAH H1 BWC sing 225 n n CAC H2 BWC sing 226 n n CAB H3 BWC sing 227 n n CAF H4 BWC sing 228 n n CAL H5 BWC sing 229 n n CAR H6 BWC sing 230 n n CAR H7 BWC sing 231 n n CAR H8 BWC sing 232 n n NAN H9 BWC sing 233 n n CAS H10 BWC sing 234 n n CAS H11 BWC sing 235 n n CAS H12 BWC sing 236 n n NAV H13 BWC sing 237 n n CAW H14 BWC sing 238 n n CAW H15 BWC sing 239 n n CAX H16 BWC sing 240 n n CAX H17 BWC sing 241 n n CAZ H19 BWC sing 242 n n CAZ H20 BWC sing 243 n n CBA H21 BWC sing 244 n n CBA H22 BWC sing 245 n n CBB H23 BWC sing 246 n n CBB H24 BWC sing 247 n n CBC H25 BWC sing 248 n n CBC H26 BWC sing 249 n n # _atom_sites.entry_id 6M13 _atom_sites.fract_transf_matrix[1][1] 0.016821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BWC a 1 801 801 BWC DRG . D 3 25L a 1 802 904 25L 25L . E 4 PO4 a 1 803 1 PO4 PO4 . F 2 BWC b 1 901 901 BWC DRG . G 3 25L b 1 902 905 25L 25L . H 5 HOH a 1 901 2 HOH HOH . H 5 HOH a 2 902 4 HOH HOH . H 5 HOH a 3 903 10 HOH HOH . H 5 HOH a 4 904 5 HOH HOH . H 5 HOH a 5 905 3 HOH HOH . H 5 HOH a 6 906 8 HOH HOH . H 5 HOH a 7 907 9 HOH HOH . I 5 HOH b 1 1001 6 HOH HOH . I 5 HOH b 2 1002 1 HOH HOH . I 5 HOH b 3 1003 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAK BWC . . . F 2 0.786 9.192 -43.391 1 112.54 ? OAK BWC 901 b 1 HETATM 2 C CAI BWC . . . F 2 -0.206 9.878 -43.726 1 118.91 ? CAI BWC 901 b 1 HETATM 3 N NAH BWC . . . F 2 -0.299 11.182 -43.402 1 114.09 ? NAH BWC 901 b 1 HETATM 4 C CAD BWC . . . F 2 -1.461 11.669 -43.88 1 108.77 ? CAD BWC 901 b 1 HETATM 5 C CAC BWC . . . F 2 -1.996 12.915 -43.803 1 101.14 ? CAC BWC 901 b 1 HETATM 6 C CAB BWC . . . F 2 -3.234 13.189 -44.401 1 95.86 ? CAB BWC 901 b 1 HETATM 7 C CAA BWC . . . F 2 -3.908 12.159 -45.065 1 99.38 ? CAA BWC 901 b 1 HETATM 8 F FAG BWC . . . F 2 -5.129 12.394 -45.665 1 100.05 ? FAG BWC 901 b 1 HETATM 9 C CAF BWC . . . F 2 -3.321 10.883 -45.118 1 100.86 ? CAF BWC 901 b 1 HETATM 10 C CAE BWC . . . F 2 -2.112 10.643 -44.527 1 109.51 ? CAE BWC 901 b 1 HETATM 11 C CAJ BWC . . . F 2 -1.328 9.502 -44.437 1 117.97 ? CAJ BWC 901 b 1 HETATM 12 C CAL BWC . . . F 2 -1.726 8.281 -45.013 1 116.93 ? CAL BWC 901 b 1 HETATM 13 C CAM BWC . . . F 2 -1.037 7.075 -45.026 1 128.43 ? CAM BWC 901 b 1 HETATM 14 C CAQ BWC . . . F 2 -1.475 5.88 -45.537 1 136.72 ? CAQ BWC 901 b 1 HETATM 15 C CAR BWC . . . F 2 -2.862 5.681 -46.212 1 134.24 ? CAR BWC 901 b 1 HETATM 16 N NAN BWC . . . F 2 0.2 6.834 -44.536 1 144.01 ? NAN BWC 901 b 1 HETATM 17 C CAO BWC . . . F 2 0.527 5.533 -44.727 1 150.23 ? CAO BWC 901 b 1 HETATM 18 C CAS BWC . . . F 2 1.92 4.974 -44.249 1 134.11 ? CAS BWC 901 b 1 HETATM 19 C CAP BWC . . . F 2 -0.524 4.892 -45.356 1 150.22 ? CAP BWC 901 b 1 HETATM 20 C CAT BWC . . . F 2 -0.624 3.548 -45.744 1 155.83 ? CAT BWC 901 b 1 HETATM 21 O OAU BWC . . . F 2 0.051 3.121 -46.681 1 171.72 ? OAU BWC 901 b 1 HETATM 22 N NAV BWC . . . F 2 -1.481 2.721 -45.035 1 162.62 ? NAV BWC 901 b 1 HETATM 23 C CAW BWC . . . F 2 -1.709 1.289 -45.274 1 167.63 ? CAW BWC 901 b 1 HETATM 24 C CAX BWC . . . F 2 -0.417 0.548 -44.971 1 172.96 ? CAX BWC 901 b 1 HETATM 25 N NAY BWC . . . F 2 -0.232 -0.466 -45.963 1 174.16 ? NAY BWC 901 b 1 HETATM 26 C CAZ BWC . . . F 2 0.037 -0.025 -47.319 1 170.02 ? CAZ BWC 901 b 1 HETATM 27 C CBA BWC . . . F 2 1.341 -0.706 -47.69 1 172.2 ? CBA BWC 901 b 1 HETATM 28 C CBB BWC . . . F 2 1.563 -1.735 -46.64 1 169.54 ? CBB BWC 901 b 1 HETATM 29 C CBC BWC . . . F 2 1.08 -0.972 -45.485 1 171 ? CBC BWC 901 b 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #