data_6M1T # _model_server_result.job_id '_TL1MY34tR2W-Y25jcpSnQ' _model_server_result.datetime_utc '2024-10-10 06:25:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 6M1T # _exptl.entry_id 6M1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M1T _cell.length_a 45.634 _cell.length_b 95.447 _cell.length_c 99.567 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 182 A CYS 182 1_555 D SG CYS . A CYS 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf2 B SG CYS 182 B CYS 182 1_555 H SG CYS . B CYS 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 166 n n N1 HN11 GSH sing 167 n n N1 HN12 GSH sing 168 n n CA1 C1 GSH sing 169 n n CA1 CB1 GSH sing 170 n n CA1 HA1 GSH sing 171 n n C1 O11 GSH doub 172 n n C1 O12 GSH sing 173 n n O12 H12 GSH sing 174 n n CB1 CG1 GSH sing 175 n n CB1 HB12 GSH sing 176 n n CB1 HB13 GSH sing 177 n n CG1 CD1 GSH sing 178 n n CG1 HG12 GSH sing 179 n n CG1 HG13 GSH sing 180 n n CD1 OE1 GSH doub 181 n n CD1 N2 GSH sing 182 n n N2 CA2 GSH sing 183 n n N2 HN2 GSH sing 184 n n CA2 C2 GSH sing 185 n n CA2 CB2 GSH sing 186 n n CA2 HA2 GSH sing 187 n n C2 O2 GSH doub 188 n n C2 N3 GSH sing 189 n n CB2 SG2 GSH sing 190 n n CB2 HB22 GSH sing 191 n n CB2 HB23 GSH sing 192 n n SG2 HSG GSH sing 193 n n N3 CA3 GSH sing 194 n n N3 HN3 GSH sing 195 n n CA3 C3 GSH sing 196 n n CA3 HA31 GSH sing 197 n n CA3 HA32 GSH sing 198 n n C3 O31 GSH doub 199 n n C3 O32 GSH sing 200 n n O32 H32 GSH sing 201 n n # _atom_sites.entry_id 6M1T _atom_sites.fract_transf_matrix[1][1] 0.021913 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010477 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010043 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 301 1 GSH GSH . D 3 CYS A 1 302 1 CYS CYS . E 4 SO4 A 1 303 1 SO4 SO4 . F 5 1PE A 1 304 101 1PE 1PE . G 2 GSH B 1 301 2 GSH GSH . H 3 CYS B 1 302 2 CYS CYS . I 4 SO4 B 1 303 2 SO4 SO4 . J 6 HOH A 1 401 18 HOH HOH . J 6 HOH A 2 402 126 HOH HOH . J 6 HOH A 3 403 90 HOH HOH . J 6 HOH A 4 404 92 HOH HOH . J 6 HOH A 5 405 12 HOH HOH . J 6 HOH A 6 406 67 HOH HOH . J 6 HOH A 7 407 107 HOH HOH . J 6 HOH A 8 408 1 HOH HOH . J 6 HOH A 9 409 14 HOH HOH . J 6 HOH A 10 410 15 HOH HOH . J 6 HOH A 11 411 30 HOH HOH . J 6 HOH A 12 412 60 HOH HOH . J 6 HOH A 13 413 52 HOH HOH . J 6 HOH A 14 414 16 HOH HOH . J 6 HOH A 15 415 94 HOH HOH . J 6 HOH A 16 416 4 HOH HOH . J 6 HOH A 17 417 6 HOH HOH . J 6 HOH A 18 418 40 HOH HOH . J 6 HOH A 19 419 112 HOH HOH . J 6 HOH A 20 420 63 HOH HOH . J 6 HOH A 21 421 100 HOH HOH . J 6 HOH A 22 422 39 HOH HOH . J 6 HOH A 23 423 5 HOH HOH . J 6 HOH A 24 424 110 HOH HOH . J 6 HOH A 25 425 7 HOH HOH . J 6 HOH A 26 426 47 HOH HOH . J 6 HOH A 27 427 10 HOH HOH . J 6 HOH A 28 428 89 HOH HOH . J 6 HOH A 29 429 28 HOH HOH . J 6 HOH A 30 430 103 HOH HOH . J 6 HOH A 31 431 96 HOH HOH . J 6 HOH A 32 432 81 HOH HOH . J 6 HOH A 33 433 61 HOH HOH . J 6 HOH A 34 434 79 HOH HOH . J 6 HOH A 35 435 35 HOH HOH . J 6 HOH A 36 436 41 HOH HOH . J 6 HOH A 37 437 86 HOH HOH . J 6 HOH A 38 438 25 HOH HOH . J 6 HOH A 39 439 42 HOH HOH . J 6 HOH A 40 440 72 HOH HOH . J 6 HOH A 41 441 101 HOH HOH . J 6 HOH A 42 442 3 HOH HOH . J 6 HOH A 43 443 98 HOH HOH . J 6 HOH A 44 444 62 HOH HOH . J 6 HOH A 45 445 83 HOH HOH . J 6 HOH A 46 446 29 HOH HOH . J 6 HOH A 47 447 33 HOH HOH . J 6 HOH A 48 448 55 HOH HOH . J 6 HOH A 49 449 104 HOH HOH . J 6 HOH A 50 450 74 HOH HOH . J 6 HOH A 51 451 73 HOH HOH . J 6 HOH A 52 452 68 HOH HOH . J 6 HOH A 53 453 102 HOH HOH . K 6 HOH B 1 401 56 HOH HOH . K 6 HOH B 2 402 64 HOH HOH . K 6 HOH B 3 403 59 HOH HOH . K 6 HOH B 4 404 122 HOH HOH . K 6 HOH B 5 405 49 HOH HOH . K 6 HOH B 6 406 85 HOH HOH . K 6 HOH B 7 407 57 HOH HOH . K 6 HOH B 8 408 19 HOH HOH . K 6 HOH B 9 409 20 HOH HOH . K 6 HOH B 10 410 48 HOH HOH . K 6 HOH B 11 411 13 HOH HOH . K 6 HOH B 12 412 34 HOH HOH . K 6 HOH B 13 413 127 HOH HOH . K 6 HOH B 14 414 2 HOH HOH . K 6 HOH B 15 415 113 HOH HOH . K 6 HOH B 16 416 37 HOH HOH . K 6 HOH B 17 417 22 HOH HOH . K 6 HOH B 18 418 51 HOH HOH . K 6 HOH B 19 419 38 HOH HOH . K 6 HOH B 20 420 32 HOH HOH . K 6 HOH B 21 421 43 HOH HOH . K 6 HOH B 22 422 120 HOH HOH . K 6 HOH B 23 423 9 HOH HOH . K 6 HOH B 24 424 27 HOH HOH . K 6 HOH B 25 425 11 HOH HOH . K 6 HOH B 26 426 58 HOH HOH . K 6 HOH B 27 427 50 HOH HOH . K 6 HOH B 28 428 45 HOH HOH . K 6 HOH B 29 429 21 HOH HOH . K 6 HOH B 30 430 24 HOH HOH . K 6 HOH B 31 431 91 HOH HOH . K 6 HOH B 32 432 17 HOH HOH . K 6 HOH B 33 433 105 HOH HOH . K 6 HOH B 34 434 44 HOH HOH . K 6 HOH B 35 435 26 HOH HOH . K 6 HOH B 36 436 23 HOH HOH . K 6 HOH B 37 437 77 HOH HOH . K 6 HOH B 38 438 121 HOH HOH . K 6 HOH B 39 439 53 HOH HOH . K 6 HOH B 40 440 93 HOH HOH . K 6 HOH B 41 441 46 HOH HOH . K 6 HOH B 42 442 8 HOH HOH . K 6 HOH B 43 443 54 HOH HOH . K 6 HOH B 44 444 65 HOH HOH . K 6 HOH B 45 445 31 HOH HOH . K 6 HOH B 46 446 36 HOH HOH . K 6 HOH B 47 447 117 HOH HOH . K 6 HOH B 48 448 88 HOH HOH . K 6 HOH B 49 449 69 HOH HOH . K 6 HOH B 50 450 106 HOH HOH . K 6 HOH B 51 451 76 HOH HOH . K 6 HOH B 52 452 124 HOH HOH . K 6 HOH B 53 453 75 HOH HOH . K 6 HOH B 54 454 82 HOH HOH . K 6 HOH B 55 455 84 HOH HOH . K 6 HOH B 56 456 66 HOH HOH . K 6 HOH B 57 457 87 HOH HOH . K 6 HOH B 58 458 80 HOH HOH . K 6 HOH B 59 459 70 HOH HOH . K 6 HOH B 60 460 128 HOH HOH . K 6 HOH B 61 461 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . G 2 -3.319 -3.771 -19.539 1 17.35 ? N1 GSH 301 B 1 HETATM 2 C CA1 GSH . . . G 2 -4.477 -4.654 -19.251 1 17.22 ? CA1 GSH 301 B 1 HETATM 3 C C1 GSH . . . G 2 -5.287 -4.091 -18.051 1 18.72 ? C1 GSH 301 B 1 HETATM 4 O O11 GSH . . . G 2 -6.537 -4.311 -18.031 1 18.98 ? O11 GSH 301 B 1 HETATM 5 O O12 GSH . . . G 2 -4.673 -3.414 -17.202 1 19.87 ? O12 GSH 301 B 1 HETATM 6 C CB1 GSH . . . G 2 -3.911 -6.069 -19.062 1 17.19 ? CB1 GSH 301 B 1 HETATM 7 C CG1 GSH . . . G 2 -4.948 -7.106 -18.668 1 15.4 ? CG1 GSH 301 B 1 HETATM 8 C CD1 GSH . . . G 2 -4.318 -8.484 -18.665 1 18.12 ? CD1 GSH 301 B 1 HETATM 9 O OE1 GSH . . . G 2 -3.16 -8.67 -19.042 1 14.11 ? OE1 GSH 301 B 1 HETATM 10 N N2 GSH . . . G 2 -5.117 -9.462 -18.255 1 15.49 ? N2 GSH 301 B 1 HETATM 11 C CA2 GSH . . . G 2 -4.754 -10.865 -18.213 1 16.39 ? CA2 GSH 301 B 1 HETATM 12 C C2 GSH . . . G 2 -5.351 -11.649 -19.37 1 16.43 ? C2 GSH 301 B 1 HETATM 13 O O2 GSH . . . G 2 -6.53 -11.521 -19.706 1 16.32 ? O2 GSH 301 B 1 HETATM 14 C CB2 GSH . . . G 2 -5.142 -11.45 -16.861 1 16.05 ? CB2 GSH 301 B 1 HETATM 15 S SG2 GSH . . . G 2 -4.156 -10.774 -15.508 1 20.09 ? SG2 GSH 301 B 1 HETATM 16 N N3 GSH . . . G 2 -4.537 -12.475 -19.997 1 18.57 ? N3 GSH 301 B 1 HETATM 17 C CA3 GSH . . . G 2 -4.986 -13.335 -21.06 1 24.7 ? CA3 GSH 301 B 1 HETATM 18 C C3 GSH . . . G 2 -4.268 -13.028 -22.369 1 29.03 ? C3 GSH 301 B 1 HETATM 19 O O31 GSH . . . G 2 -4.56 -13.735 -23.348 1 38.25 ? O31 GSH 301 B 1 HETATM 20 O O32 GSH . . . G 2 -3.42 -12.1 -22.353 1 33.61 ? O32 GSH 301 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #