data_6M1X # _model_server_result.job_id J-cnc9KqeZ16Lf6OVsurIQ _model_server_result.datetime_utc '2025-03-09 02:32:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m1x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 6M1X # _exptl.entry_id 6M1X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.057 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-PHOSPHOGLYCERIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M1X _cell.length_a 96.976 _cell.length_b 112.388 _cell.length_c 177.428 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M1X _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,G,K 2 1 D,H,L 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # _chem_comp.formula 'C3 H7 O7 P' _chem_comp.formula_weight 186.057 _chem_comp.id 3PG _chem_comp.mon_nstd_flag . _chem_comp.name '3-PHOSPHOGLYCERIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 3PG doub 1 n n C1 O2 3PG sing 2 n n C1 C2 3PG sing 3 n n O2 HO2 3PG sing 4 n n C2 O3 3PG sing 5 n n C2 C3 3PG sing 6 n n C2 H2 3PG sing 7 n n O3 HO3 3PG sing 8 n n C3 O1P 3PG sing 9 n n C3 H31 3PG sing 10 n n C3 H32 3PG sing 11 n n O1P P 3PG sing 12 n n P O2P 3PG doub 13 n n P O3P 3PG sing 14 n n P O4P 3PG sing 15 n n O3P HOP3 3PG sing 16 n n O4P HOP4 3PG sing 17 n n # _atom_sites.entry_id 6M1X _atom_sites.fract_transf_matrix[1][1] 0.010312 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005636 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 2 PO4 PO4 . F 2 PO4 B 1 301 1 PO4 PO4 . G 3 3PG C 1 301 2 3PG 3PG . H 3 3PG D 1 301 3 3PG 3PG . I 4 HOH A 1 401 3 HOH HOH . I 4 HOH A 2 402 19 HOH HOH . I 4 HOH A 3 403 2 HOH HOH . I 4 HOH A 4 404 22 HOH HOH . I 4 HOH A 5 405 23 HOH HOH . I 4 HOH A 6 406 5 HOH HOH . I 4 HOH A 7 407 15 HOH HOH . I 4 HOH A 8 408 36 HOH HOH . I 4 HOH A 9 409 25 HOH HOH . I 4 HOH A 10 410 11 HOH HOH . I 4 HOH A 11 411 20 HOH HOH . I 4 HOH A 12 412 31 HOH HOH . I 4 HOH A 13 413 28 HOH HOH . I 4 HOH A 14 414 21 HOH HOH . I 4 HOH A 15 415 34 HOH HOH . J 4 HOH B 1 401 29 HOH HOH . J 4 HOH B 2 402 10 HOH HOH . J 4 HOH B 3 403 1 HOH HOH . J 4 HOH B 4 404 24 HOH HOH . J 4 HOH B 5 405 8 HOH HOH . J 4 HOH B 6 406 17 HOH HOH . J 4 HOH B 7 407 35 HOH HOH . J 4 HOH B 8 408 6 HOH HOH . J 4 HOH B 9 409 16 HOH HOH . K 4 HOH C 1 401 30 HOH HOH . K 4 HOH C 2 402 4 HOH HOH . K 4 HOH C 3 403 33 HOH HOH . K 4 HOH C 4 404 27 HOH HOH . K 4 HOH C 5 405 12 HOH HOH . K 4 HOH C 6 406 13 HOH HOH . K 4 HOH C 7 407 18 HOH HOH . K 4 HOH C 8 408 32 HOH HOH . K 4 HOH C 9 409 7 HOH HOH . K 4 HOH C 10 410 9 HOH HOH . L 4 HOH D 1 401 14 HOH HOH . L 4 HOH D 2 402 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3PG . . . H 3 -10.522 -39.865 -7.455 1 88.02 ? C1 3PG 301 D 1 HETATM 2 O O1 3PG . . . H 3 -11.609 -39.796 -8.068 1 76.57 ? O1 3PG 301 D 1 HETATM 3 O O2 3PG . . . H 3 -9.486 -39.282 -7.841 1 72.17 ? O2 3PG 301 D 1 HETATM 4 C C2 3PG . . . H 3 -10.485 -40.596 -6.146 1 86.23 ? C2 3PG 301 D 1 HETATM 5 O O3 3PG . . . H 3 -9.18 -41.147 -5.943 1 77.1 ? O3 3PG 301 D 1 HETATM 6 C C3 3PG . . . H 3 -11.515 -41.719 -6.162 1 80.27 ? C3 3PG 301 D 1 HETATM 7 O O1P 3PG . . . H 3 -12.001 -41.938 -4.839 1 72.95 ? O1P 3PG 301 D 1 HETATM 8 P P 3PG . . . H 3 -13.539 -42.343 -4.591 1 81.74 ? P 3PG 301 D 1 HETATM 9 O O2P 3PG . . . H 3 -14.314 -41.374 -5.452 1 72.34 ? O2P 3PG 301 D 1 HETATM 10 O O3P 3PG . . . H 3 -13.732 -42.148 -3.106 1 79.07 ? O3P 3PG 301 D 1 HETATM 11 O O4P 3PG . . . H 3 -13.615 -43.78 -5.046 1 79.93 ? O4P 3PG 301 D 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #