data_6M2R # _model_server_result.job_id btIsjZZE6F9-UqXVsJkqqA _model_server_result.datetime_utc '2024-11-21 14:38:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m2r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":704}' # _entry.id 6M2R # _exptl.entry_id 6M2R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 169.178 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description L-NOREPINEPHRINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M2R _cell.length_a 96.8 _cell.length_b 141.27 _cell.length_c 167.711 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M2R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc1 A O GLY 18 A GLY 42 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 I NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 I NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc5 A O SER 255 A SER 320 1_555 I NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc6 A OG SER 255 A SER 320 1_555 I NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 I NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc8 A O LEU 352 A LEU 417 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc9 A OG SER 356 A SER 421 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc10 I NA NA . A NA 706 1_555 P O HOH . A HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc11 B O THR 22 L THR 22 1_555 O NA NA . L NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc12 B OG SER 101 L SER 101 1_555 N NA NA . L NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc13 B O GLY 102 L GLY 102 1_555 N NA NA . L NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.016 ? metalc ? metalc14 B OG1 THR 103 L THR 103 1_555 O NA NA . L NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? # _chem_comp.formula 'C8 H11 N O3' _chem_comp.formula_weight 169.178 _chem_comp.id LNR _chem_comp.mon_nstd_flag . _chem_comp.name L-NOREPINEPHRINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NORADRENALINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ OAC LNR sing 378 n n OAC HOAC LNR sing 379 n n CAG CAJ LNR doub 380 n y CAJ CAI LNR sing 381 n y CAK CAG LNR sing 382 n y CAG HAG LNR sing 383 n n CAE CAI LNR doub 384 n y CAI OAB LNR sing 385 n n OAB HOAB LNR sing 386 n n CAF CAE LNR sing 387 n y CAE HAE LNR sing 388 n n CAK CAF LNR doub 389 n y CAF HAF LNR sing 390 n n CAL CAK LNR sing 391 n n CAH CAL LNR sing 392 n n OAD CAL LNR sing 393 n n CAL HAL LNR sing 394 n n OAD HOAD LNR sing 395 n n NAA CAH LNR sing 396 n n CAH HAH LNR sing 397 n n CAH HAHA LNR sing 398 n n NAA HNAA LNR sing 399 n n NAA HNAB LNR sing 400 n n # _atom_sites.entry_id 6M2R _atom_sites.fract_transf_matrix[1][1] 0.010331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DMU A 1 701 1 DMU DMU . E 5 Y01 A 1 702 1 Y01 Y01 . F 6 CLR A 1 703 1 CLR CLR . G 7 LNR A 1 704 1 LNR LNR . H 8 CL A 1 705 5 CL CL . I 9 NA A 1 706 1 NA NA . J 9 NA A 1 707 2 NA NA . K 10 D10 A 1 708 1 D10 D10 . L 10 D10 A 1 709 2 D10 D10 . M 10 D10 A 1 710 3 D10 D10 . N 9 NA L 1 301 3 NA NA . O 9 NA L 1 302 4 NA NA . P 11 HOH A 1 801 8 HOH HOH . P 11 HOH A 2 802 22 HOH HOH . P 11 HOH A 3 803 3 HOH HOH . P 11 HOH A 4 804 7 HOH HOH . P 11 HOH A 5 805 13 HOH HOH . P 11 HOH A 6 806 12 HOH HOH . P 11 HOH A 7 807 5 HOH HOH . P 11 HOH A 8 808 1 HOH HOH . P 11 HOH A 9 809 20 HOH HOH . P 11 HOH A 10 810 87 HOH HOH . P 11 HOH A 11 811 15 HOH HOH . P 11 HOH A 12 812 9 HOH HOH . P 11 HOH A 13 813 6 HOH HOH . P 11 HOH A 14 814 90 HOH HOH . P 11 HOH A 15 815 4 HOH HOH . P 11 HOH A 16 816 99 HOH HOH . P 11 HOH A 17 817 2 HOH HOH . P 11 HOH A 18 818 11 HOH HOH . P 11 HOH A 19 819 17 HOH HOH . P 11 HOH A 20 820 88 HOH HOH . P 11 HOH A 21 821 10 HOH HOH . P 11 HOH A 22 822 19 HOH HOH . P 11 HOH A 23 823 23 HOH HOH . P 11 HOH A 24 824 18 HOH HOH . P 11 HOH A 25 825 14 HOH HOH . P 11 HOH A 26 826 21 HOH HOH . P 11 HOH A 27 827 16 HOH HOH . Q 11 HOH L 1 401 31 HOH HOH . Q 11 HOH L 2 402 92 HOH HOH . Q 11 HOH L 3 403 49 HOH HOH . Q 11 HOH L 4 404 62 HOH HOH . Q 11 HOH L 5 405 72 HOH HOH . Q 11 HOH L 6 406 51 HOH HOH . Q 11 HOH L 7 407 91 HOH HOH . Q 11 HOH L 8 408 73 HOH HOH . Q 11 HOH L 9 409 26 HOH HOH . Q 11 HOH L 10 410 24 HOH HOH . Q 11 HOH L 11 411 74 HOH HOH . Q 11 HOH L 12 412 52 HOH HOH . Q 11 HOH L 13 413 50 HOH HOH . Q 11 HOH L 14 414 60 HOH HOH . Q 11 HOH L 15 415 67 HOH HOH . Q 11 HOH L 16 416 27 HOH HOH . Q 11 HOH L 17 417 29 HOH HOH . Q 11 HOH L 18 418 61 HOH HOH . Q 11 HOH L 19 419 84 HOH HOH . Q 11 HOH L 20 420 82 HOH HOH . Q 11 HOH L 21 421 69 HOH HOH . Q 11 HOH L 22 422 30 HOH HOH . Q 11 HOH L 23 423 48 HOH HOH . Q 11 HOH L 24 424 58 HOH HOH . Q 11 HOH L 25 425 25 HOH HOH . Q 11 HOH L 26 426 55 HOH HOH . Q 11 HOH L 27 427 81 HOH HOH . Q 11 HOH L 28 428 53 HOH HOH . Q 11 HOH L 29 429 47 HOH HOH . Q 11 HOH L 30 430 80 HOH HOH . Q 11 HOH L 31 431 59 HOH HOH . Q 11 HOH L 32 432 28 HOH HOH . Q 11 HOH L 33 433 46 HOH HOH . Q 11 HOH L 34 434 56 HOH HOH . Q 11 HOH L 35 435 71 HOH HOH . Q 11 HOH L 36 436 83 HOH HOH . Q 11 HOH L 37 437 63 HOH HOH . Q 11 HOH L 38 438 57 HOH HOH . R 11 HOH H 1 301 93 HOH HOH . R 11 HOH H 2 302 89 HOH HOH . R 11 HOH H 3 303 76 HOH HOH . R 11 HOH H 4 304 32 HOH HOH . R 11 HOH H 5 305 66 HOH HOH . R 11 HOH H 6 306 40 HOH HOH . R 11 HOH H 7 307 35 HOH HOH . R 11 HOH H 8 308 42 HOH HOH . R 11 HOH H 9 309 98 HOH HOH . R 11 HOH H 10 310 36 HOH HOH . R 11 HOH H 11 311 65 HOH HOH . R 11 HOH H 12 312 38 HOH HOH . R 11 HOH H 13 313 39 HOH HOH . R 11 HOH H 14 314 45 HOH HOH . R 11 HOH H 15 315 44 HOH HOH . R 11 HOH H 16 316 64 HOH HOH . R 11 HOH H 17 317 41 HOH HOH . R 11 HOH H 18 318 77 HOH HOH . R 11 HOH H 19 319 95 HOH HOH . R 11 HOH H 20 320 43 HOH HOH . R 11 HOH H 21 321 78 HOH HOH . R 11 HOH H 22 322 54 HOH HOH . R 11 HOH H 23 323 85 HOH HOH . R 11 HOH H 24 324 96 HOH HOH . R 11 HOH H 25 325 75 HOH HOH . R 11 HOH H 26 326 86 HOH HOH . R 11 HOH H 27 327 37 HOH HOH . R 11 HOH H 28 328 94 HOH HOH . R 11 HOH H 29 329 97 HOH HOH . R 11 HOH H 30 330 34 HOH HOH . R 11 HOH H 31 331 68 HOH HOH . R 11 HOH H 32 332 33 HOH HOH . R 11 HOH H 33 333 70 HOH HOH . R 11 HOH H 34 334 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC LNR . . . G 7 -12.642 3.392 -28.717 1 85.88 ? OAC LNR 704 A 1 HETATM 2 C CAJ LNR . . . G 7 -11.452 3.231 -27.985 1 86.95 ? CAJ LNR 704 A 1 HETATM 3 C CAG LNR . . . G 7 -10.434 2.425 -28.481 1 87.7 ? CAG LNR 704 A 1 HETATM 4 C CAI LNR . . . G 7 -11.289 3.87 -26.763 1 87.44 ? CAI LNR 704 A 1 HETATM 5 O OAB LNR . . . G 7 -12.314 4.678 -26.237 1 82.8 ? OAB LNR 704 A 1 HETATM 6 C CAE LNR . . . G 7 -10.111 3.7 -26.049 1 82.67 ? CAE LNR 704 A 1 HETATM 7 C CAF LNR . . . G 7 -9.095 2.895 -26.548 1 83.65 ? CAF LNR 704 A 1 HETATM 8 C CAK LNR . . . G 7 -9.248 2.257 -27.772 1 89.63 ? CAK LNR 704 A 1 HETATM 9 C CAL LNR . . . G 7 -8.129 1.366 -28.338 1 99.62 ? CAL LNR 704 A 1 HETATM 10 O OAD LNR . . . G 7 -8.63 0.052 -28.382 1 96.56 ? OAD LNR 704 A 1 HETATM 11 C CAH LNR . . . G 7 -7.695 1.855 -29.724 1 89.18 ? CAH LNR 704 A 1 HETATM 12 N NAA LNR . . . G 7 -6.286 2.229 -29.72 1 81.74 ? NAA LNR 704 A 1 HETATM 13 H HOAC LNR . . . G 7 -13.28 3.57 -28.184 1 103.05 ? HOAC LNR 704 A 1 HETATM 14 H HAG LNR . . . G 7 -10.547 1.992 -29.296 1 105.24 ? HAG LNR 704 A 1 HETATM 15 H HOAB LNR . . . G 7 -12.066 4.998 -25.49 1 99.36 ? HOAB LNR 704 A 1 HETATM 16 H HAE LNR . . . G 7 -10.001 4.127 -25.23 1 99.2 ? HAE LNR 704 A 1 HETATM 17 H HAF LNR . . . G 7 -8.311 2.784 -26.062 1 100.38 ? HAF LNR 704 A 1 HETATM 18 H HAL LNR . . . G 7 -7.338 1.4 -27.777 1 119.55 ? HAL LNR 704 A 1 HETATM 19 H HOAD LNR . . . G 7 -7.983 -0.498 -28.386 1 115.87 ? HOAD LNR 704 A 1 HETATM 20 H HAH LNR . . . G 7 -8.229 2.627 -29.97 1 107.02 ? HAH LNR 704 A 1 HETATM 21 H HAHA LNR . . . G 7 -7.835 1.146 -30.37 1 107.02 ? HAHA LNR 704 A 1 HETATM 22 H HNAA LNR . . . G 7 -5.915 2.009 -28.941 1 98.09 ? HNAA LNR 704 A 1 HETATM 23 H HNAB LNR . . . G 7 -5.869 1.796 -30.373 1 98.09 ? HNAB LNR 704 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #