data_6M38
#
_model_server_result.job_id            bo62FUWQ2JgyI3-_ON-lrg 
_model_server_result.datetime_utc      '2024-11-24 21:26:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m38 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":606}' 
#
_entry.id    6M38 
#
_exptl.entry_id    6M38 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              482.562 
_entity.id                          8 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            DECYL-BETA-D-MALTOPYRANOSIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6M38 
_cell.length_a            97.288 
_cell.length_b            140.641 
_cell.length_c            167.818 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M38 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc1 A O GLY 18 A GLY 42 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc2 A O ALA 20 A ALA 44 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc3 A O VAL 21 A VAL 45 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc5 A O SER 255 A SER 320 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc6 A OG SER 255 A SER 320 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.18 ? 
metalc ? metalc8 A O LEU 352 A LEU 417 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc9 A OD1 ASP 355 A ASP 420 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc10 A OG SER 356 A SER 421 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
#
_chem_comp.formula           'C22 H42 O11' 
_chem_comp.formula_weight    482.562 
_chem_comp.id                DMU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DECYL-BETA-D-MALTOPYRANOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     DECYLMALTOSIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C40 C37 DMU sing 202 n n 
C40 C43 DMU sing 203 n n 
C37 C34 DMU sing 204 n n 
C34 C31 DMU sing 205 n n 
C31 C28 DMU sing 206 n n 
C28 C25 DMU sing 207 n n 
C22 C25 DMU sing 208 n n 
C22 C19 DMU sing 209 n n 
O61 C57 DMU sing 210 n n 
O4 C7 DMU sing 211 n n 
C18 C19 DMU sing 212 n n 
C18 O16 DMU sing 213 n n 
O5 C6 DMU sing 214 n n 
O5 C4 DMU sing 215 n n 
C57 C4 DMU sing 216 n n 
C6 O16 DMU sing 217 n n 
C6 C1 DMU sing 218 n n 
C7 C5 DMU sing 219 n n 
C7 C8 DMU sing 220 n n 
C4 C3 DMU sing 221 n n 
O1 C10 DMU sing 222 n n 
O1 C9 DMU sing 223 n n 
C10 C5 DMU sing 224 n n 
C10 O7 DMU sing 225 n n 
C5 O3 DMU sing 226 n n 
O49 C1 DMU sing 227 n n 
C8 C9 DMU sing 228 n n 
C8 O2 DMU sing 229 n n 
C1 C2 DMU sing 230 n n 
C11 C9 DMU sing 231 n n 
C11 O6 DMU sing 232 n n 
C3 O7 DMU sing 233 n n 
C3 C2 DMU sing 234 n n 
C2 O55 DMU sing 235 n n 
C1 H1 DMU sing 236 n n 
C2 H2 DMU sing 237 n n 
C3 H3 DMU sing 238 n n 
C4 H4 DMU sing 239 n n 
C6 H5 DMU sing 240 n n 
C18 H6 DMU sing 241 n n 
C18 H7 DMU sing 242 n n 
C19 H8 DMU sing 243 n n 
C19 H9 DMU sing 244 n n 
C22 H10 DMU sing 245 n n 
C22 H11 DMU sing 246 n n 
C25 H12 DMU sing 247 n n 
C25 H13 DMU sing 248 n n 
C28 H14 DMU sing 249 n n 
C28 H15 DMU sing 250 n n 
C31 H16 DMU sing 251 n n 
C31 H17 DMU sing 252 n n 
C34 H18 DMU sing 253 n n 
C34 H19 DMU sing 254 n n 
C37 H20 DMU sing 255 n n 
C37 H21 DMU sing 256 n n 
C40 H22 DMU sing 257 n n 
C40 H23 DMU sing 258 n n 
C43 H24 DMU sing 259 n n 
C43 H25 DMU sing 260 n n 
C43 H26 DMU sing 261 n n 
O49 H27 DMU sing 262 n n 
O55 H28 DMU sing 263 n n 
C57 H29 DMU sing 264 n n 
C57 H30 DMU sing 265 n n 
O61 H31 DMU sing 266 n n 
C5 H32 DMU sing 267 n n 
C7 H33 DMU sing 268 n n 
C8 H34 DMU sing 269 n n 
C9 H35 DMU sing 270 n n 
C10 H36 DMU sing 271 n n 
O2 H37 DMU sing 272 n n 
O3 H38 DMU sing 273 n n 
O4 H39 DMU sing 274 n n 
C11 H40 DMU sing 275 n n 
C11 H41 DMU sing 276 n n 
O6 H42 DMU sing 277 n n 
#
_atom_sites.entry_id                     6M38 
_atom_sites.fract_transf_matrix[1][1]    0.010279 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00711 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005959 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 29E A 1 601 1 29E 29E . 
E 5 Y01 A 1 602 1 Y01 Y01 . 
F 6 NA A 1 603 101 NA NA . 
G 7 CL A 1 604 102 CL CL . 
H 6 NA A 1 605 103 NA NA . 
I 8 DMU A 1 606 1 DMU DMU . 
J 9 CLR A 1 607 1 CLR CLR . 
K 10 HOH A 1 701 2 HOH HOH . 
K 10 HOH A 2 702 13 HOH HOH . 
K 10 HOH A 3 703 5 HOH HOH . 
K 10 HOH A 4 704 14 HOH HOH . 
K 10 HOH A 5 705 15 HOH HOH . 
K 10 HOH A 6 706 1 HOH HOH . 
K 10 HOH A 7 707 12 HOH HOH . 
K 10 HOH A 8 708 21 HOH HOH . 
K 10 HOH A 9 709 3 HOH HOH . 
K 10 HOH A 10 710 4 HOH HOH . 
K 10 HOH A 11 711 6 HOH HOH . 
L 10 HOH L 1 301 17 HOH HOH . 
L 10 HOH L 2 302 9 HOH HOH . 
L 10 HOH L 3 303 8 HOH HOH . 
L 10 HOH L 4 304 7 HOH HOH . 
L 10 HOH L 5 305 18 HOH HOH . 
L 10 HOH L 6 306 16 HOH HOH . 
M 10 HOH H 1 301 24 HOH HOH . 
M 10 HOH H 2 302 19 HOH HOH . 
M 10 HOH H 3 303 11 HOH HOH . 
M 10 HOH H 4 304 22 HOH HOH . 
M 10 HOH H 5 305 10 HOH HOH . 
M 10 HOH H 6 306 23 HOH HOH . 
M 10 HOH H 7 307 20 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DMU . . . I 8 195.055 282.948 -1.55 1 88.67 ? C1 DMU 606 A 1 
HETATM 2 C C2 DMU . . . I 8 193.638 282.704 -2.09 1 85.83 ? C2 DMU 606 A 1 
HETATM 3 C C3 DMU . . . I 8 192.645 282.437 -0.948 1 86.74 ? C3 DMU 606 A 1 
HETATM 4 C C4 DMU . . . I 8 192.751 283.478 0.172 1 89.52 ? C4 DMU 606 A 1 
HETATM 5 O O5 DMU . . . I 8 194.115 283.642 0.561 1 87.35 ? O5 DMU 606 A 1 
HETATM 6 C C6 DMU . . . I 8 194.98 284.059 -0.494 1 88.09 ? C6 DMU 606 A 1 
HETATM 7 O O7 DMU . . . I 8 191.33 282.523 -1.487 1 87.64 ? O7 DMU 606 A 1 
HETATM 8 O O16 DMU . . . I 8 196.255 284.339 0.093 1 90.2 ? O16 DMU 606 A 1 
HETATM 9 C C18 DMU . . . I 8 196.13 284.969 1.372 1 81.26 ? C18 DMU 606 A 1 
HETATM 10 C C19 DMU . . . I 8 197.419 285.703 1.732 1 84.42 ? C19 DMU 606 A 1 
HETATM 11 C C22 DMU . . . I 8 197.418 285.96 3.24 1 84.83 ? C22 DMU 606 A 1 
HETATM 12 C C25 DMU . . . I 8 196.491 287.137 3.553 1 87.13 ? C25 DMU 606 A 1 
HETATM 13 C C28 DMU . . . I 8 197.351 288.341 3.963 1 95.19 ? C28 DMU 606 A 1 
HETATM 14 C C31 DMU . . . I 8 196.553 289.65 3.841 1 96.94 ? C31 DMU 606 A 1 
HETATM 15 C C34 DMU . . . I 8 197.497 290.86 3.925 1 94.15 ? C34 DMU 606 A 1 
HETATM 16 C C37 DMU . . . I 8 196.69 292.152 4.103 1 94.22 ? C37 DMU 606 A 1 
HETATM 17 C C40 DMU . . . I 8 195.803 292.402 2.876 1 95.59 ? C40 DMU 606 A 1 
HETATM 18 C C43 DMU . . . I 8 194.892 293.61 3.127 1 87.24 ? C43 DMU 606 A 1 
HETATM 19 O O49 DMU . . . I 8 195.913 283.336 -2.633 1 92.23 ? O49 DMU 606 A 1 
HETATM 20 O O55 DMU . . . I 8 193.629 281.564 -2.959 1 89 ? O55 DMU 606 A 1 
HETATM 21 C C57 DMU . . . I 8 191.923 283.024 1.383 1 89.02 ? C57 DMU 606 A 1 
HETATM 22 O O61 DMU . . . I 8 192.672 282.136 2.225 1 88.91 ? O61 DMU 606 A 1 
HETATM 23 C C5 DMU . . . I 8 189.856 281.22 -2.892 1 96.29 ? C5 DMU 606 A 1 
HETATM 24 C C7 DMU . . . I 8 188.676 282.205 -2.799 1 88.73 ? C7 DMU 606 A 1 
HETATM 25 C C8 DMU . . . I 8 187.862 281.904 -1.524 1 91.64 ? C8 DMU 606 A 1 
HETATM 26 C C9 DMU . . . I 8 188.788 282.036 -0.308 1 95.44 ? C9 DMU 606 A 1 
HETATM 27 O O1 DMU . . . I 8 189.832 281.075 -0.457 1 98.4 ? O1 DMU 606 A 1 
HETATM 28 C C10 DMU . . . I 8 190.673 281.264 -1.595 1 93.34 ? C10 DMU 606 A 1 
HETATM 29 O O2 DMU . . . I 8 186.763 282.81 -1.39 1 91.44 ? O2 DMU 606 A 1 
HETATM 30 O O3 DMU . . . I 8 190.729 281.532 -3.988 1 98.32 ? O3 DMU 606 A 1 
HETATM 31 O O4 DMU . . . I 8 187.842 282.074 -3.955 1 88.28 ? O4 DMU 606 A 1 
HETATM 32 C C11 DMU . . . I 8 188.023 281.791 1.005 1 91.59 ? C11 DMU 606 A 1 
HETATM 33 O O6 DMU . . . I 8 188.89 281.893 2.149 1 85.81 ? O6 DMU 606 A 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           217 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#