data_6M38 # _model_server_result.job_id Sp3-TEqfuA84rX98bFLphw _model_server_result.datetime_utc '2024-10-14 01:26:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":606}' # _entry.id 6M38 # _exptl.entry_id 6M38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 8 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M38 _cell.length_a 97.288 _cell.length_b 140.641 _cell.length_c 167.818 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A O GLY 18 A GLY 42 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc5 A O SER 255 A SER 320 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc6 A OG SER 255 A SER 320 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 F NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.18 ? metalc ? metalc8 A O LEU 352 A LEU 417 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc9 A OD1 ASP 355 A ASP 420 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc10 A OG SER 356 A SER 421 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 202 n n C40 C43 DMU sing 203 n n C37 C34 DMU sing 204 n n C34 C31 DMU sing 205 n n C31 C28 DMU sing 206 n n C28 C25 DMU sing 207 n n C22 C25 DMU sing 208 n n C22 C19 DMU sing 209 n n O61 C57 DMU sing 210 n n O4 C7 DMU sing 211 n n C18 C19 DMU sing 212 n n C18 O16 DMU sing 213 n n O5 C6 DMU sing 214 n n O5 C4 DMU sing 215 n n C57 C4 DMU sing 216 n n C6 O16 DMU sing 217 n n C6 C1 DMU sing 218 n n C7 C5 DMU sing 219 n n C7 C8 DMU sing 220 n n C4 C3 DMU sing 221 n n O1 C10 DMU sing 222 n n O1 C9 DMU sing 223 n n C10 C5 DMU sing 224 n n C10 O7 DMU sing 225 n n C5 O3 DMU sing 226 n n O49 C1 DMU sing 227 n n C8 C9 DMU sing 228 n n C8 O2 DMU sing 229 n n C1 C2 DMU sing 230 n n C11 C9 DMU sing 231 n n C11 O6 DMU sing 232 n n C3 O7 DMU sing 233 n n C3 C2 DMU sing 234 n n C2 O55 DMU sing 235 n n C1 H1 DMU sing 236 n n C2 H2 DMU sing 237 n n C3 H3 DMU sing 238 n n C4 H4 DMU sing 239 n n C6 H5 DMU sing 240 n n C18 H6 DMU sing 241 n n C18 H7 DMU sing 242 n n C19 H8 DMU sing 243 n n C19 H9 DMU sing 244 n n C22 H10 DMU sing 245 n n C22 H11 DMU sing 246 n n C25 H12 DMU sing 247 n n C25 H13 DMU sing 248 n n C28 H14 DMU sing 249 n n C28 H15 DMU sing 250 n n C31 H16 DMU sing 251 n n C31 H17 DMU sing 252 n n C34 H18 DMU sing 253 n n C34 H19 DMU sing 254 n n C37 H20 DMU sing 255 n n C37 H21 DMU sing 256 n n C40 H22 DMU sing 257 n n C40 H23 DMU sing 258 n n C43 H24 DMU sing 259 n n C43 H25 DMU sing 260 n n C43 H26 DMU sing 261 n n O49 H27 DMU sing 262 n n O55 H28 DMU sing 263 n n C57 H29 DMU sing 264 n n C57 H30 DMU sing 265 n n O61 H31 DMU sing 266 n n C5 H32 DMU sing 267 n n C7 H33 DMU sing 268 n n C8 H34 DMU sing 269 n n C9 H35 DMU sing 270 n n C10 H36 DMU sing 271 n n O2 H37 DMU sing 272 n n O3 H38 DMU sing 273 n n O4 H39 DMU sing 274 n n C11 H40 DMU sing 275 n n C11 H41 DMU sing 276 n n O6 H42 DMU sing 277 n n # _atom_sites.entry_id 6M38 _atom_sites.fract_transf_matrix[1][1] 0.010279 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00711 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 29E A 1 601 1 29E 29E . E 5 Y01 A 1 602 1 Y01 Y01 . F 6 NA A 1 603 101 NA NA . G 7 CL A 1 604 102 CL CL . H 6 NA A 1 605 103 NA NA . I 8 DMU A 1 606 1 DMU DMU . J 9 CLR A 1 607 1 CLR CLR . K 10 HOH A 1 701 2 HOH HOH . K 10 HOH A 2 702 13 HOH HOH . K 10 HOH A 3 703 5 HOH HOH . K 10 HOH A 4 704 14 HOH HOH . K 10 HOH A 5 705 15 HOH HOH . K 10 HOH A 6 706 1 HOH HOH . K 10 HOH A 7 707 12 HOH HOH . K 10 HOH A 8 708 21 HOH HOH . K 10 HOH A 9 709 3 HOH HOH . K 10 HOH A 10 710 4 HOH HOH . K 10 HOH A 11 711 6 HOH HOH . L 10 HOH L 1 301 17 HOH HOH . L 10 HOH L 2 302 9 HOH HOH . L 10 HOH L 3 303 8 HOH HOH . L 10 HOH L 4 304 7 HOH HOH . L 10 HOH L 5 305 18 HOH HOH . L 10 HOH L 6 306 16 HOH HOH . M 10 HOH H 1 301 24 HOH HOH . M 10 HOH H 2 302 19 HOH HOH . M 10 HOH H 3 303 11 HOH HOH . M 10 HOH H 4 304 22 HOH HOH . M 10 HOH H 5 305 10 HOH HOH . M 10 HOH H 6 306 23 HOH HOH . M 10 HOH H 7 307 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . I 8 195.055 282.948 -1.55 1 88.67 ? C1 DMU 606 A 1 HETATM 2 C C2 DMU . . . I 8 193.638 282.704 -2.09 1 85.83 ? C2 DMU 606 A 1 HETATM 3 C C3 DMU . . . I 8 192.645 282.437 -0.948 1 86.74 ? C3 DMU 606 A 1 HETATM 4 C C4 DMU . . . I 8 192.751 283.478 0.172 1 89.52 ? C4 DMU 606 A 1 HETATM 5 O O5 DMU . . . I 8 194.115 283.642 0.561 1 87.35 ? O5 DMU 606 A 1 HETATM 6 C C6 DMU . . . I 8 194.98 284.059 -0.494 1 88.09 ? C6 DMU 606 A 1 HETATM 7 O O7 DMU . . . I 8 191.33 282.523 -1.487 1 87.64 ? O7 DMU 606 A 1 HETATM 8 O O16 DMU . . . I 8 196.255 284.339 0.093 1 90.2 ? O16 DMU 606 A 1 HETATM 9 C C18 DMU . . . I 8 196.13 284.969 1.372 1 81.26 ? C18 DMU 606 A 1 HETATM 10 C C19 DMU . . . I 8 197.419 285.703 1.732 1 84.42 ? C19 DMU 606 A 1 HETATM 11 C C22 DMU . . . I 8 197.418 285.96 3.24 1 84.83 ? C22 DMU 606 A 1 HETATM 12 C C25 DMU . . . I 8 196.491 287.137 3.553 1 87.13 ? C25 DMU 606 A 1 HETATM 13 C C28 DMU . . . I 8 197.351 288.341 3.963 1 95.19 ? C28 DMU 606 A 1 HETATM 14 C C31 DMU . . . I 8 196.553 289.65 3.841 1 96.94 ? C31 DMU 606 A 1 HETATM 15 C C34 DMU . . . I 8 197.497 290.86 3.925 1 94.15 ? C34 DMU 606 A 1 HETATM 16 C C37 DMU . . . I 8 196.69 292.152 4.103 1 94.22 ? C37 DMU 606 A 1 HETATM 17 C C40 DMU . . . I 8 195.803 292.402 2.876 1 95.59 ? C40 DMU 606 A 1 HETATM 18 C C43 DMU . . . I 8 194.892 293.61 3.127 1 87.24 ? C43 DMU 606 A 1 HETATM 19 O O49 DMU . . . I 8 195.913 283.336 -2.633 1 92.23 ? O49 DMU 606 A 1 HETATM 20 O O55 DMU . . . I 8 193.629 281.564 -2.959 1 89 ? O55 DMU 606 A 1 HETATM 21 C C57 DMU . . . I 8 191.923 283.024 1.383 1 89.02 ? C57 DMU 606 A 1 HETATM 22 O O61 DMU . . . I 8 192.672 282.136 2.225 1 88.91 ? O61 DMU 606 A 1 HETATM 23 C C5 DMU . . . I 8 189.856 281.22 -2.892 1 96.29 ? C5 DMU 606 A 1 HETATM 24 C C7 DMU . . . I 8 188.676 282.205 -2.799 1 88.73 ? C7 DMU 606 A 1 HETATM 25 C C8 DMU . . . I 8 187.862 281.904 -1.524 1 91.64 ? C8 DMU 606 A 1 HETATM 26 C C9 DMU . . . I 8 188.788 282.036 -0.308 1 95.44 ? C9 DMU 606 A 1 HETATM 27 O O1 DMU . . . I 8 189.832 281.075 -0.457 1 98.4 ? O1 DMU 606 A 1 HETATM 28 C C10 DMU . . . I 8 190.673 281.264 -1.595 1 93.34 ? C10 DMU 606 A 1 HETATM 29 O O2 DMU . . . I 8 186.763 282.81 -1.39 1 91.44 ? O2 DMU 606 A 1 HETATM 30 O O3 DMU . . . I 8 190.729 281.532 -3.988 1 98.32 ? O3 DMU 606 A 1 HETATM 31 O O4 DMU . . . I 8 187.842 282.074 -3.955 1 88.28 ? O4 DMU 606 A 1 HETATM 32 C C11 DMU . . . I 8 188.023 281.791 1.005 1 91.59 ? C11 DMU 606 A 1 HETATM 33 O O6 DMU . . . I 8 188.89 281.893 2.149 1 85.81 ? O6 DMU 606 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #