data_6M49 # _model_server_result.job_id 9y8zibZ-qttoocpIZvXgrQ _model_server_result.datetime_utc '2025-02-27 00:23:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m49 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6M49 # _exptl.entry_id 6M49 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 402.653 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 25-HYDROXYCHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M49 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M49 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H46 O2' _chem_comp.formula_weight 402.653 _chem_comp.id HC3 _chem_comp.mon_nstd_flag . _chem_comp.name 25-HYDROXYCHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (3BETA)-CHOLEST-5-ENE-3,25-DIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C13 HC3 sing 129 n n C18 H181 HC3 sing 130 n n C18 H182 HC3 sing 131 n n C18 H183 HC3 sing 132 n n C13 C12 HC3 sing 133 n n C13 C14 HC3 sing 134 n n C13 C17 HC3 sing 135 n n C12 C11 HC3 sing 136 n n C12 H121 HC3 sing 137 n n C12 H122 HC3 sing 138 n n C11 C9 HC3 sing 139 n n C11 H111 HC3 sing 140 n n C11 H112 HC3 sing 141 n n C9 C10 HC3 sing 142 n n C9 C8 HC3 sing 143 n n C9 H9 HC3 sing 144 n n C10 C19 HC3 sing 145 n n C10 C1 HC3 sing 146 n n C10 C5 HC3 sing 147 n n C19 H191 HC3 sing 148 n n C19 H192 HC3 sing 149 n n C19 H193 HC3 sing 150 n n C1 C2 HC3 sing 151 n n C1 H11 HC3 sing 152 n n C1 H12 HC3 sing 153 n n C2 C3 HC3 sing 154 n n C2 H21 HC3 sing 155 n n C2 H22 HC3 sing 156 n n C3 O1 HC3 sing 157 n n C3 C4 HC3 sing 158 n n C3 H3 HC3 sing 159 n n O1 HO1 HC3 sing 160 n n C4 C5 HC3 sing 161 n n C4 H41 HC3 sing 162 n n C4 H42 HC3 sing 163 n n C5 C6 HC3 doub 164 n n C6 C7 HC3 sing 165 n n C6 H6 HC3 sing 166 n n C7 C8 HC3 sing 167 n n C7 H71 HC3 sing 168 n n C7 H72 HC3 sing 169 n n C8 C14 HC3 sing 170 n n C8 H8 HC3 sing 171 n n C14 C15 HC3 sing 172 n n C14 H14 HC3 sing 173 n n C15 C16 HC3 sing 174 n n C15 H151 HC3 sing 175 n n C15 H152 HC3 sing 176 n n C16 C17 HC3 sing 177 n n C16 H161 HC3 sing 178 n n C16 H162 HC3 sing 179 n n C17 C20 HC3 sing 180 n n C17 H17 HC3 sing 181 n n C20 C21 HC3 sing 182 n n C20 C22 HC3 sing 183 n n C20 H20 HC3 sing 184 n n C21 H211 HC3 sing 185 n n C21 H212 HC3 sing 186 n n C21 H213 HC3 sing 187 n n C22 C23 HC3 sing 188 n n C22 H221 HC3 sing 189 n n C22 H222 HC3 sing 190 n n C23 C24 HC3 sing 191 n n C23 H231 HC3 sing 192 n n C23 H232 HC3 sing 193 n n C24 C25 HC3 sing 194 n n C24 H241 HC3 sing 195 n n C24 H242 HC3 sing 196 n n C25 C26 HC3 sing 197 n n C25 C27 HC3 sing 198 n n C25 O2 HC3 sing 199 n n C26 H261 HC3 sing 200 n n C26 H262 HC3 sing 201 n n C26 H263 HC3 sing 202 n n C27 H271 HC3 sing 203 n n C27 H272 HC3 sing 204 n n C27 H273 HC3 sing 205 n n O2 HO2 HC3 sing 206 n n # _atom_sites.entry_id 6M49 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id HC3 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 501 _pdbx_nonpoly_scheme.pdb_mon_id HC3 _pdbx_nonpoly_scheme.auth_mon_id HC3 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 HC3 . . . C 3 106.978 112.877 108.999 1 125.32 ? C18 HC3 501 A 1 HETATM 2 C C13 HC3 . . . C 3 108.364 113.449 108.791 1 125.32 ? C13 HC3 501 A 1 HETATM 3 C C12 HC3 . . . C 3 109.373 112.624 109.572 1 125.32 ? C12 HC3 501 A 1 HETATM 4 C C11 HC3 . . . C 3 109.186 112.795 111.079 1 125.32 ? C11 HC3 501 A 1 HETATM 5 C C9 HC3 . . . C 3 109.151 114.252 111.546 1 125.32 ? C9 HC3 501 A 1 HETATM 6 C C10 HC3 . . . C 3 108.838 114.407 113.03 1 125.32 ? C10 HC3 501 A 1 HETATM 7 C C19 HC3 . . . C 3 107.474 113.892 113.435 1 125.32 ? C19 HC3 501 A 1 HETATM 8 C C1 HC3 . . . C 3 109.894 113.681 113.836 1 125.32 ? C1 HC3 501 A 1 HETATM 9 C C2 HC3 . . . C 3 109.819 113.995 115.317 1 125.32 ? C2 HC3 501 A 1 HETATM 10 C C3 HC3 . . . C 3 110.012 115.482 115.527 1 125.32 ? C3 HC3 501 A 1 HETATM 11 O O1 HC3 . . . C 3 110.014 115.738 116.934 1 125.32 ? O1 HC3 501 A 1 HETATM 12 C C4 HC3 . . . C 3 108.89 116.242 114.844 1 125.32 ? C4 HC3 501 A 1 HETATM 13 C C5 HC3 . . . C 3 108.79 115.859 113.398 1 125.32 ? C5 HC3 501 A 1 HETATM 14 C C6 HC3 . . . C 3 108.611 116.829 112.493 1 125.32 ? C6 HC3 501 A 1 HETATM 15 C C7 HC3 . . . C 3 108.431 116.566 111.021 1 125.32 ? C7 HC3 501 A 1 HETATM 16 C C8 HC3 . . . C 3 108.208 115.098 110.723 1 125.32 ? C8 HC3 501 A 1 HETATM 17 C C14 HC3 . . . C 3 108.513 114.877 109.261 1 125.32 ? C14 HC3 501 A 1 HETATM 18 C C15 HC3 . . . C 3 107.673 115.693 108.316 1 125.32 ? C15 HC3 501 A 1 HETATM 19 C C16 HC3 . . . C 3 107.91 114.989 106.988 1 125.32 ? C16 HC3 501 A 1 HETATM 20 C C17 HC3 . . . C 3 108.619 113.678 107.292 1 125.32 ? C17 HC3 501 A 1 HETATM 21 C C20 HC3 . . . C 3 108.146 112.665 106.262 1 125.32 ? C20 HC3 501 A 1 HETATM 22 C C21 HC3 . . . C 3 108.647 111.272 106.552 1 125.32 ? C21 HC3 501 A 1 HETATM 23 C C22 HC3 . . . C 3 108.618 113.127 104.884 1 125.32 ? C22 HC3 501 A 1 HETATM 24 C C23 HC3 . . . C 3 108.737 112.07 103.776 1 125.32 ? C23 HC3 501 A 1 HETATM 25 C C24 HC3 . . . C 3 107.446 111.823 103.013 1 125.32 ? C24 HC3 501 A 1 HETATM 26 C C25 HC3 . . . C 3 107.513 112.35 101.579 1 125.32 ? C25 HC3 501 A 1 HETATM 27 C C26 HC3 . . . C 3 106.244 111.979 100.812 1 125.32 ? C26 HC3 501 A 1 HETATM 28 C C27 HC3 . . . C 3 107.771 113.852 101.514 1 125.32 ? C27 HC3 501 A 1 HETATM 29 O O2 HC3 . . . C 3 108.6 111.683 100.928 1 125.32 ? O2 HC3 501 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #