data_6M4I # _model_server_result.job_id rY40KGyAPlvOKKtvjoMlhQ _model_server_result.datetime_utc '2024-11-13 21:53:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 6M4I # _exptl.entry_id 6M4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.85 _cell.angle_gamma 90 _cell.entry_id 6M4I _cell.length_a 96.825 _cell.length_b 82.839 _cell.length_c 49.372 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 99 A THR 93 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc2 C O2B ADP . A ADP 600 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc3 D MG MG . A MG 601 1_555 G O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc4 D MG MG . A MG 601 1_555 G O HOH . A HOH 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc5 D MG MG . A MG 601 1_555 G O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc6 D MG MG . A MG 601 1_555 G O HOH . A HOH 779 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc7 B OG1 THR 99 B THR 93 1_555 F MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc8 E O2B ADP . B ADP 600 1_555 F MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc9 F MG MG . B MG 601 1_555 H O HOH . B HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc10 F MG MG . B MG 601 1_555 H O HOH . B HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc11 F MG MG . B MG 601 1_555 H O HOH . B HOH 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc12 F MG MG . B MG 601 1_555 H O HOH . B HOH 739 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6M4I _atom_sites.fract_transf_matrix[1][1] 0.010328 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001979 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 600 600 ADP ADP . D 3 MG A 1 601 601 MG MG . E 2 ADP B 1 600 600 ADP ADP . F 3 MG B 1 601 601 MG MG . G 4 HOH A 1 701 137 HOH HOH . G 4 HOH A 2 702 40 HOH HOH . G 4 HOH A 3 703 8 HOH HOH . G 4 HOH A 4 704 77 HOH HOH . G 4 HOH A 5 705 58 HOH HOH . G 4 HOH A 6 706 90 HOH HOH . G 4 HOH A 7 707 32 HOH HOH . G 4 HOH A 8 708 51 HOH HOH . G 4 HOH A 9 709 111 HOH HOH . G 4 HOH A 10 710 18 HOH HOH . G 4 HOH A 11 711 7 HOH HOH . G 4 HOH A 12 712 20 HOH HOH . G 4 HOH A 13 713 59 HOH HOH . G 4 HOH A 14 714 60 HOH HOH . G 4 HOH A 15 715 12 HOH HOH . G 4 HOH A 16 716 47 HOH HOH . G 4 HOH A 17 717 83 HOH HOH . G 4 HOH A 18 718 120 HOH HOH . G 4 HOH A 19 719 22 HOH HOH . G 4 HOH A 20 720 57 HOH HOH . G 4 HOH A 21 721 92 HOH HOH . G 4 HOH A 22 722 118 HOH HOH . G 4 HOH A 23 723 119 HOH HOH . G 4 HOH A 24 724 11 HOH HOH . G 4 HOH A 25 725 44 HOH HOH . G 4 HOH A 26 726 62 HOH HOH . G 4 HOH A 27 727 17 HOH HOH . G 4 HOH A 28 728 48 HOH HOH . G 4 HOH A 29 729 91 HOH HOH . G 4 HOH A 30 730 6 HOH HOH . G 4 HOH A 31 731 139 HOH HOH . G 4 HOH A 32 732 109 HOH HOH . G 4 HOH A 33 733 124 HOH HOH . G 4 HOH A 34 734 85 HOH HOH . G 4 HOH A 35 735 15 HOH HOH . G 4 HOH A 36 736 65 HOH HOH . G 4 HOH A 37 737 66 HOH HOH . G 4 HOH A 38 738 84 HOH HOH . G 4 HOH A 39 739 31 HOH HOH . G 4 HOH A 40 740 16 HOH HOH . G 4 HOH A 41 741 34 HOH HOH . G 4 HOH A 42 742 24 HOH HOH . G 4 HOH A 43 743 14 HOH HOH . G 4 HOH A 44 744 68 HOH HOH . G 4 HOH A 45 745 52 HOH HOH . G 4 HOH A 46 746 122 HOH HOH . G 4 HOH A 47 747 81 HOH HOH . G 4 HOH A 48 748 108 HOH HOH . G 4 HOH A 49 749 43 HOH HOH . G 4 HOH A 50 750 102 HOH HOH . G 4 HOH A 51 751 19 HOH HOH . G 4 HOH A 52 752 25 HOH HOH . G 4 HOH A 53 753 112 HOH HOH . G 4 HOH A 54 754 13 HOH HOH . G 4 HOH A 55 755 82 HOH HOH . G 4 HOH A 56 756 75 HOH HOH . G 4 HOH A 57 757 26 HOH HOH . G 4 HOH A 58 758 114 HOH HOH . G 4 HOH A 59 759 49 HOH HOH . G 4 HOH A 60 760 9 HOH HOH . G 4 HOH A 61 761 23 HOH HOH . G 4 HOH A 62 762 54 HOH HOH . G 4 HOH A 63 763 30 HOH HOH . G 4 HOH A 64 764 4 HOH HOH . G 4 HOH A 65 765 72 HOH HOH . G 4 HOH A 66 766 2 HOH HOH . G 4 HOH A 67 767 87 HOH HOH . G 4 HOH A 68 768 93 HOH HOH . G 4 HOH A 69 769 67 HOH HOH . G 4 HOH A 70 770 113 HOH HOH . G 4 HOH A 71 771 39 HOH HOH . G 4 HOH A 72 772 80 HOH HOH . G 4 HOH A 73 773 86 HOH HOH . G 4 HOH A 74 774 99 HOH HOH . G 4 HOH A 75 775 42 HOH HOH . G 4 HOH A 76 776 10 HOH HOH . G 4 HOH A 77 777 38 HOH HOH . G 4 HOH A 78 778 29 HOH HOH . G 4 HOH A 79 779 73 HOH HOH . G 4 HOH A 80 780 37 HOH HOH . G 4 HOH A 81 781 105 HOH HOH . G 4 HOH A 82 782 97 HOH HOH . G 4 HOH A 83 783 71 HOH HOH . G 4 HOH A 84 784 138 HOH HOH . G 4 HOH A 85 785 50 HOH HOH . G 4 HOH A 86 786 95 HOH HOH . G 4 HOH A 87 787 36 HOH HOH . G 4 HOH A 88 788 96 HOH HOH . G 4 HOH A 89 789 94 HOH HOH . G 4 HOH A 90 790 88 HOH HOH . G 4 HOH A 91 791 21 HOH HOH . G 4 HOH A 92 792 1 HOH HOH . G 4 HOH A 93 793 5 HOH HOH . G 4 HOH A 94 794 53 HOH HOH . G 4 HOH A 95 795 27 HOH HOH . G 4 HOH A 96 796 33 HOH HOH . G 4 HOH A 97 797 78 HOH HOH . G 4 HOH A 98 798 45 HOH HOH . G 4 HOH A 99 799 106 HOH HOH . G 4 HOH A 100 800 135 HOH HOH . H 4 HOH B 1 701 121 HOH HOH . H 4 HOH B 2 702 35 HOH HOH . H 4 HOH B 3 703 103 HOH HOH . H 4 HOH B 4 704 128 HOH HOH . H 4 HOH B 5 705 89 HOH HOH . H 4 HOH B 6 706 46 HOH HOH . H 4 HOH B 7 707 134 HOH HOH . H 4 HOH B 8 708 104 HOH HOH . H 4 HOH B 9 709 41 HOH HOH . H 4 HOH B 10 710 125 HOH HOH . H 4 HOH B 11 711 129 HOH HOH . H 4 HOH B 12 712 126 HOH HOH . H 4 HOH B 13 713 133 HOH HOH . H 4 HOH B 14 714 101 HOH HOH . H 4 HOH B 15 715 69 HOH HOH . H 4 HOH B 16 716 132 HOH HOH . H 4 HOH B 17 717 74 HOH HOH . H 4 HOH B 18 718 136 HOH HOH . H 4 HOH B 19 719 70 HOH HOH . H 4 HOH B 20 720 79 HOH HOH . H 4 HOH B 21 721 63 HOH HOH . H 4 HOH B 22 722 115 HOH HOH . H 4 HOH B 23 723 127 HOH HOH . H 4 HOH B 24 724 76 HOH HOH . H 4 HOH B 25 725 110 HOH HOH . H 4 HOH B 26 726 130 HOH HOH . H 4 HOH B 27 727 131 HOH HOH . H 4 HOH B 28 728 100 HOH HOH . H 4 HOH B 29 729 55 HOH HOH . H 4 HOH B 30 730 117 HOH HOH . H 4 HOH B 31 731 3 HOH HOH . H 4 HOH B 32 732 140 HOH HOH . H 4 HOH B 33 733 116 HOH HOH . H 4 HOH B 34 734 98 HOH HOH . H 4 HOH B 35 735 28 HOH HOH . H 4 HOH B 36 736 61 HOH HOH . H 4 HOH B 37 737 107 HOH HOH . H 4 HOH B 38 738 123 HOH HOH . H 4 HOH B 39 739 64 HOH HOH . H 4 HOH B 40 740 56 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 55.736 _atom_site.Cartn_y 14.765 _atom_site.Cartn_z 12.638 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #