data_6M6D # _model_server_result.job_id afmq1LhTPk2KldhznIPWZw _model_server_result.datetime_utc '2024-10-22 07:30:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m6d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6M6D # _exptl.entry_id 6M6D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.47 _cell.angle_gamma 90 _cell.entry_id 6M6D _cell.length_a 76.568 _cell.length_b 83.736 _cell.length_c 61.96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M6D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -22.518825 0 121.856756 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 401 A CYS 401 1_555 A SG CYS 416 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A NE2 HIS 226 A HIS 226 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc2 A NE2 HIS 308 A HIS 308 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc3 A OE1 GLU 394 A GLU 394 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C O10 NJX . A NJX 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O16 NJX . A NJX 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc6 B CO CO . A CO 501 1_555 D O HOH . A HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6M6D _atom_sites.fract_transf_matrix[1][1] 0.01306 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002414 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 2 CO CO . C 3 NJX A 1 502 501 NJX LIG . D 4 HOH A 1 601 100 HOH HOH . D 4 HOH A 2 602 199 HOH HOH . D 4 HOH A 3 603 242 HOH HOH . D 4 HOH A 4 604 248 HOH HOH . D 4 HOH A 5 605 227 HOH HOH . D 4 HOH A 6 606 70 HOH HOH . D 4 HOH A 7 607 113 HOH HOH . D 4 HOH A 8 608 234 HOH HOH . D 4 HOH A 9 609 42 HOH HOH . D 4 HOH A 10 610 214 HOH HOH . D 4 HOH A 11 611 163 HOH HOH . D 4 HOH A 12 612 94 HOH HOH . D 4 HOH A 13 613 230 HOH HOH . D 4 HOH A 14 614 127 HOH HOH . D 4 HOH A 15 615 144 HOH HOH . D 4 HOH A 16 616 121 HOH HOH . D 4 HOH A 17 617 76 HOH HOH . D 4 HOH A 18 618 173 HOH HOH . D 4 HOH A 19 619 116 HOH HOH . D 4 HOH A 20 620 196 HOH HOH . D 4 HOH A 21 621 18 HOH HOH . D 4 HOH A 22 622 102 HOH HOH . D 4 HOH A 23 623 27 HOH HOH . D 4 HOH A 24 624 34 HOH HOH . D 4 HOH A 25 625 69 HOH HOH . D 4 HOH A 26 626 98 HOH HOH . D 4 HOH A 27 627 26 HOH HOH . D 4 HOH A 28 628 60 HOH HOH . D 4 HOH A 29 629 129 HOH HOH . D 4 HOH A 30 630 82 HOH HOH . D 4 HOH A 31 631 90 HOH HOH . D 4 HOH A 32 632 74 HOH HOH . D 4 HOH A 33 633 62 HOH HOH . D 4 HOH A 34 634 88 HOH HOH . D 4 HOH A 35 635 24 HOH HOH . D 4 HOH A 36 636 148 HOH HOH . D 4 HOH A 37 637 96 HOH HOH . D 4 HOH A 38 638 16 HOH HOH . D 4 HOH A 39 639 14 HOH HOH . D 4 HOH A 40 640 246 HOH HOH . D 4 HOH A 41 641 152 HOH HOH . D 4 HOH A 42 642 169 HOH HOH . D 4 HOH A 43 643 75 HOH HOH . D 4 HOH A 44 644 1 HOH HOH . D 4 HOH A 45 645 8 HOH HOH . D 4 HOH A 46 646 28 HOH HOH . D 4 HOH A 47 647 133 HOH HOH . D 4 HOH A 48 648 99 HOH HOH . D 4 HOH A 49 649 265 HOH HOH . D 4 HOH A 50 650 63 HOH HOH . D 4 HOH A 51 651 33 HOH HOH . D 4 HOH A 52 652 68 HOH HOH . D 4 HOH A 53 653 58 HOH HOH . D 4 HOH A 54 654 101 HOH HOH . D 4 HOH A 55 655 112 HOH HOH . D 4 HOH A 56 656 40 HOH HOH . D 4 HOH A 57 657 202 HOH HOH . D 4 HOH A 58 658 61 HOH HOH . D 4 HOH A 59 659 7 HOH HOH . D 4 HOH A 60 660 22 HOH HOH . D 4 HOH A 61 661 31 HOH HOH . D 4 HOH A 62 662 264 HOH HOH . D 4 HOH A 63 663 154 HOH HOH . D 4 HOH A 64 664 71 HOH HOH . D 4 HOH A 65 665 37 HOH HOH . D 4 HOH A 66 666 29 HOH HOH . D 4 HOH A 67 667 187 HOH HOH . D 4 HOH A 68 668 66 HOH HOH . D 4 HOH A 69 669 54 HOH HOH . D 4 HOH A 70 670 136 HOH HOH . D 4 HOH A 71 671 55 HOH HOH . D 4 HOH A 72 672 189 HOH HOH . D 4 HOH A 73 673 10 HOH HOH . D 4 HOH A 74 674 137 HOH HOH . D 4 HOH A 75 675 201 HOH HOH . D 4 HOH A 76 676 53 HOH HOH . D 4 HOH A 77 677 228 HOH HOH . D 4 HOH A 78 678 50 HOH HOH . D 4 HOH A 79 679 225 HOH HOH . D 4 HOH A 80 680 25 HOH HOH . D 4 HOH A 81 681 84 HOH HOH . D 4 HOH A 82 682 180 HOH HOH . D 4 HOH A 83 683 81 HOH HOH . D 4 HOH A 84 684 43 HOH HOH . D 4 HOH A 85 685 158 HOH HOH . D 4 HOH A 86 686 5 HOH HOH . D 4 HOH A 87 687 126 HOH HOH . D 4 HOH A 88 688 78 HOH HOH . D 4 HOH A 89 689 138 HOH HOH . D 4 HOH A 90 690 186 HOH HOH . D 4 HOH A 91 691 32 HOH HOH . D 4 HOH A 92 692 19 HOH HOH . D 4 HOH A 93 693 263 HOH HOH . D 4 HOH A 94 694 159 HOH HOH . D 4 HOH A 95 695 79 HOH HOH . D 4 HOH A 96 696 139 HOH HOH . D 4 HOH A 97 697 104 HOH HOH . D 4 HOH A 98 698 17 HOH HOH . D 4 HOH A 99 699 131 HOH HOH . D 4 HOH A 100 700 183 HOH HOH . D 4 HOH A 101 701 170 HOH HOH . D 4 HOH A 102 702 106 HOH HOH . D 4 HOH A 103 703 65 HOH HOH . D 4 HOH A 104 704 107 HOH HOH . D 4 HOH A 105 705 3 HOH HOH . D 4 HOH A 106 706 208 HOH HOH . D 4 HOH A 107 707 15 HOH HOH . D 4 HOH A 108 708 164 HOH HOH . D 4 HOH A 109 709 46 HOH HOH . D 4 HOH A 110 710 87 HOH HOH . D 4 HOH A 111 711 190 HOH HOH . D 4 HOH A 112 712 93 HOH HOH . D 4 HOH A 113 713 41 HOH HOH . D 4 HOH A 114 714 49 HOH HOH . D 4 HOH A 115 715 59 HOH HOH . D 4 HOH A 116 716 91 HOH HOH . D 4 HOH A 117 717 52 HOH HOH . D 4 HOH A 118 718 177 HOH HOH . D 4 HOH A 119 719 249 HOH HOH . D 4 HOH A 120 720 162 HOH HOH . D 4 HOH A 121 721 125 HOH HOH . D 4 HOH A 122 722 85 HOH HOH . D 4 HOH A 123 723 80 HOH HOH . D 4 HOH A 124 724 268 HOH HOH . D 4 HOH A 125 725 119 HOH HOH . D 4 HOH A 126 726 145 HOH HOH . D 4 HOH A 127 727 23 HOH HOH . D 4 HOH A 128 728 73 HOH HOH . D 4 HOH A 129 729 243 HOH HOH . D 4 HOH A 130 730 122 HOH HOH . D 4 HOH A 131 731 9 HOH HOH . D 4 HOH A 132 732 13 HOH HOH . D 4 HOH A 133 733 267 HOH HOH . D 4 HOH A 134 734 108 HOH HOH . D 4 HOH A 135 735 184 HOH HOH . D 4 HOH A 136 736 153 HOH HOH . D 4 HOH A 137 737 114 HOH HOH . D 4 HOH A 138 738 39 HOH HOH . D 4 HOH A 139 739 77 HOH HOH . D 4 HOH A 140 740 67 HOH HOH . D 4 HOH A 141 741 38 HOH HOH . D 4 HOH A 142 742 172 HOH HOH . D 4 HOH A 143 743 259 HOH HOH . D 4 HOH A 144 744 247 HOH HOH . D 4 HOH A 145 745 185 HOH HOH . D 4 HOH A 146 746 192 HOH HOH . D 4 HOH A 147 747 72 HOH HOH . D 4 HOH A 148 748 35 HOH HOH . D 4 HOH A 149 749 2 HOH HOH . D 4 HOH A 150 750 11 HOH HOH . D 4 HOH A 151 751 36 HOH HOH . D 4 HOH A 152 752 204 HOH HOH . D 4 HOH A 153 753 118 HOH HOH . D 4 HOH A 154 754 226 HOH HOH . D 4 HOH A 155 755 64 HOH HOH . D 4 HOH A 156 756 212 HOH HOH . D 4 HOH A 157 757 57 HOH HOH . D 4 HOH A 158 758 12 HOH HOH . D 4 HOH A 159 759 224 HOH HOH . D 4 HOH A 160 760 105 HOH HOH . D 4 HOH A 161 761 109 HOH HOH . D 4 HOH A 162 762 165 HOH HOH . D 4 HOH A 163 763 209 HOH HOH . D 4 HOH A 164 764 222 HOH HOH . D 4 HOH A 165 765 20 HOH HOH . D 4 HOH A 166 766 261 HOH HOH . D 4 HOH A 167 767 252 HOH HOH . D 4 HOH A 168 768 83 HOH HOH . D 4 HOH A 169 769 178 HOH HOH . D 4 HOH A 170 770 51 HOH HOH . D 4 HOH A 171 771 135 HOH HOH . D 4 HOH A 172 772 92 HOH HOH . D 4 HOH A 173 773 176 HOH HOH . D 4 HOH A 174 774 21 HOH HOH . D 4 HOH A 175 775 128 HOH HOH . D 4 HOH A 176 776 142 HOH HOH . D 4 HOH A 177 777 198 HOH HOH . D 4 HOH A 178 778 149 HOH HOH . D 4 HOH A 179 779 188 HOH HOH . D 4 HOH A 180 780 167 HOH HOH . D 4 HOH A 181 781 168 HOH HOH . D 4 HOH A 182 782 151 HOH HOH . D 4 HOH A 183 783 6 HOH HOH . D 4 HOH A 184 784 161 HOH HOH . D 4 HOH A 185 785 4 HOH HOH . D 4 HOH A 186 786 232 HOH HOH . D 4 HOH A 187 787 150 HOH HOH . D 4 HOH A 188 788 124 HOH HOH . D 4 HOH A 189 789 44 HOH HOH . D 4 HOH A 190 790 56 HOH HOH . D 4 HOH A 191 791 155 HOH HOH . D 4 HOH A 192 792 103 HOH HOH . D 4 HOH A 193 793 271 HOH HOH . D 4 HOH A 194 794 86 HOH HOH . D 4 HOH A 195 795 123 HOH HOH . D 4 HOH A 196 796 195 HOH HOH . D 4 HOH A 197 797 146 HOH HOH . D 4 HOH A 198 798 45 HOH HOH . D 4 HOH A 199 799 48 HOH HOH . D 4 HOH A 200 800 141 HOH HOH . D 4 HOH A 201 801 197 HOH HOH . D 4 HOH A 202 802 143 HOH HOH . D 4 HOH A 203 803 253 HOH HOH . D 4 HOH A 204 804 231 HOH HOH . D 4 HOH A 205 805 258 HOH HOH . D 4 HOH A 206 806 89 HOH HOH . D 4 HOH A 207 807 255 HOH HOH . D 4 HOH A 208 808 200 HOH HOH . D 4 HOH A 209 809 207 HOH HOH . D 4 HOH A 210 810 203 HOH HOH . D 4 HOH A 211 811 111 HOH HOH . D 4 HOH A 212 812 95 HOH HOH . D 4 HOH A 213 813 229 HOH HOH . D 4 HOH A 214 814 254 HOH HOH . D 4 HOH A 215 815 218 HOH HOH . D 4 HOH A 216 816 130 HOH HOH . D 4 HOH A 217 817 120 HOH HOH . D 4 HOH A 218 818 175 HOH HOH . D 4 HOH A 219 819 240 HOH HOH . D 4 HOH A 220 820 174 HOH HOH . D 4 HOH A 221 821 235 HOH HOH . D 4 HOH A 222 822 216 HOH HOH . D 4 HOH A 223 823 269 HOH HOH . D 4 HOH A 224 824 110 HOH HOH . D 4 HOH A 225 825 237 HOH HOH . D 4 HOH A 226 826 191 HOH HOH . D 4 HOH A 227 827 140 HOH HOH . D 4 HOH A 228 828 221 HOH HOH . D 4 HOH A 229 829 193 HOH HOH . D 4 HOH A 230 830 166 HOH HOH . D 4 HOH A 231 831 236 HOH HOH . D 4 HOH A 232 832 47 HOH HOH . D 4 HOH A 233 833 160 HOH HOH . D 4 HOH A 234 834 194 HOH HOH . D 4 HOH A 235 835 266 HOH HOH . D 4 HOH A 236 836 97 HOH HOH . D 4 HOH A 237 837 147 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.408 _atom_site.Cartn_y -2.599 _atom_site.Cartn_z 79.502 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #