data_6M6P # _model_server_result.job_id MX8uA-opNnHmVf7IzSnFJQ _model_server_result.datetime_utc '2024-10-20 00:32:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m6p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6M6P # _exptl.entry_id 6M6P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M6P _cell.length_a 66.998 _cell.length_b 95.644 _cell.length_c 72.989 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M6P _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 BGC GLC C1 O1 . O3 HO3 . sing 2 ? 2 3 2 BGC BGC C1 O1 . O4 HO4 . sing 3 ? 2 4 3 BGC BGC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC B 301 C3G 2 n B BGC 2 B 2 BGC B 301 C3G 2 n B BGC 3 B 3 BGC B 301 C3G 2 n B BGC 4 B 4 BGC B 301 C3G # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3 GLC . B GLC 1 1_555 B C1 BGC . B BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? covale ? covale2 B O4 BGC . B BGC 2 1_555 B C1 BGC . B BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? covale ? covale3 B O4 BGC . B BGC 3 1_555 B C1 BGC . B BGC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? metalc ? metalc1 A O GLU 11 A GLU 30 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc2 A O GLY 49 A GLY 68 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 A O ASP 226 A ASP 245 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc4 A OD1 ASP 226 A ASP 245 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc5 C CA CA . A CA 301 1_555 D O HOH . A HOH 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6M6P _atom_sites.fract_transf_matrix[1][1] 0.014926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 1 CA CA . D 4 HOH A 1 401 126 HOH HOH . D 4 HOH A 2 402 85 HOH HOH . D 4 HOH A 3 403 107 HOH HOH . D 4 HOH A 4 404 33 HOH HOH . D 4 HOH A 5 405 40 HOH HOH . D 4 HOH A 6 406 32 HOH HOH . D 4 HOH A 7 407 53 HOH HOH . D 4 HOH A 8 408 93 HOH HOH . D 4 HOH A 9 409 17 HOH HOH . D 4 HOH A 10 410 31 HOH HOH . D 4 HOH A 11 411 23 HOH HOH . D 4 HOH A 12 412 49 HOH HOH . D 4 HOH A 13 413 14 HOH HOH . D 4 HOH A 14 414 68 HOH HOH . D 4 HOH A 15 415 18 HOH HOH . D 4 HOH A 16 416 83 HOH HOH . D 4 HOH A 17 417 5 HOH HOH . D 4 HOH A 18 418 72 HOH HOH . D 4 HOH A 19 419 1 HOH HOH . D 4 HOH A 20 420 125 HOH HOH . D 4 HOH A 21 421 35 HOH HOH . D 4 HOH A 22 422 89 HOH HOH . D 4 HOH A 23 423 94 HOH HOH . D 4 HOH A 24 424 116 HOH HOH . D 4 HOH A 25 425 97 HOH HOH . D 4 HOH A 26 426 51 HOH HOH . D 4 HOH A 27 427 55 HOH HOH . D 4 HOH A 28 428 69 HOH HOH . D 4 HOH A 29 429 4 HOH HOH . D 4 HOH A 30 430 19 HOH HOH . D 4 HOH A 31 431 43 HOH HOH . D 4 HOH A 32 432 7 HOH HOH . D 4 HOH A 33 433 66 HOH HOH . D 4 HOH A 34 434 30 HOH HOH . D 4 HOH A 35 435 65 HOH HOH . D 4 HOH A 36 436 38 HOH HOH . D 4 HOH A 37 437 86 HOH HOH . D 4 HOH A 38 438 3 HOH HOH . D 4 HOH A 39 439 36 HOH HOH . D 4 HOH A 40 440 9 HOH HOH . D 4 HOH A 41 441 42 HOH HOH . D 4 HOH A 42 442 6 HOH HOH . D 4 HOH A 43 443 70 HOH HOH . D 4 HOH A 44 444 100 HOH HOH . D 4 HOH A 45 445 28 HOH HOH . D 4 HOH A 46 446 99 HOH HOH . D 4 HOH A 47 447 61 HOH HOH . D 4 HOH A 48 448 88 HOH HOH . D 4 HOH A 49 449 34 HOH HOH . D 4 HOH A 50 450 80 HOH HOH . D 4 HOH A 51 451 119 HOH HOH . D 4 HOH A 52 452 63 HOH HOH . D 4 HOH A 53 453 84 HOH HOH . D 4 HOH A 54 454 104 HOH HOH . D 4 HOH A 55 455 15 HOH HOH . D 4 HOH A 56 456 110 HOH HOH . D 4 HOH A 57 457 16 HOH HOH . D 4 HOH A 58 458 13 HOH HOH . D 4 HOH A 59 459 112 HOH HOH . D 4 HOH A 60 460 105 HOH HOH . D 4 HOH A 61 461 12 HOH HOH . D 4 HOH A 62 462 90 HOH HOH . D 4 HOH A 63 463 71 HOH HOH . D 4 HOH A 64 464 123 HOH HOH . D 4 HOH A 65 465 56 HOH HOH . D 4 HOH A 66 466 60 HOH HOH . D 4 HOH A 67 467 57 HOH HOH . D 4 HOH A 68 468 79 HOH HOH . D 4 HOH A 69 469 21 HOH HOH . D 4 HOH A 70 470 120 HOH HOH . D 4 HOH A 71 471 78 HOH HOH . D 4 HOH A 72 472 48 HOH HOH . D 4 HOH A 73 473 77 HOH HOH . D 4 HOH A 74 474 20 HOH HOH . D 4 HOH A 75 475 81 HOH HOH . D 4 HOH A 76 476 74 HOH HOH . D 4 HOH A 77 477 82 HOH HOH . D 4 HOH A 78 478 115 HOH HOH . D 4 HOH A 79 479 75 HOH HOH . D 4 HOH A 80 480 76 HOH HOH . D 4 HOH A 81 481 47 HOH HOH . D 4 HOH A 82 482 102 HOH HOH . D 4 HOH A 83 483 108 HOH HOH . D 4 HOH A 84 484 39 HOH HOH . D 4 HOH A 85 485 67 HOH HOH . D 4 HOH A 86 486 25 HOH HOH . D 4 HOH A 87 487 91 HOH HOH . D 4 HOH A 88 488 8 HOH HOH . D 4 HOH A 89 489 44 HOH HOH . D 4 HOH A 90 490 118 HOH HOH . D 4 HOH A 91 491 113 HOH HOH . D 4 HOH A 92 492 50 HOH HOH . D 4 HOH A 93 493 11 HOH HOH . D 4 HOH A 94 494 46 HOH HOH . D 4 HOH A 95 495 24 HOH HOH . D 4 HOH A 96 496 54 HOH HOH . D 4 HOH A 97 497 103 HOH HOH . D 4 HOH A 98 498 111 HOH HOH . D 4 HOH A 99 499 22 HOH HOH . D 4 HOH A 100 500 92 HOH HOH . D 4 HOH A 101 501 27 HOH HOH . D 4 HOH A 102 502 26 HOH HOH . D 4 HOH A 103 503 10 HOH HOH . D 4 HOH A 104 504 87 HOH HOH . D 4 HOH A 105 505 52 HOH HOH . D 4 HOH A 106 506 121 HOH HOH . D 4 HOH A 107 507 64 HOH HOH . D 4 HOH A 108 508 37 HOH HOH . D 4 HOH A 109 509 59 HOH HOH . D 4 HOH A 110 510 106 HOH HOH . D 4 HOH A 111 511 122 HOH HOH . D 4 HOH A 112 512 58 HOH HOH . D 4 HOH A 113 513 62 HOH HOH . D 4 HOH A 114 514 117 HOH HOH . D 4 HOH A 115 515 95 HOH HOH . D 4 HOH A 116 516 96 HOH HOH . D 4 HOH A 117 517 124 HOH HOH . D 4 HOH A 118 518 73 HOH HOH . D 4 HOH A 119 519 101 HOH HOH . D 4 HOH A 120 520 109 HOH HOH . D 4 HOH A 121 521 114 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 6.8 _atom_site.Cartn_y 15.197 _atom_site.Cartn_z 1.971 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 381 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #