data_6M79
#
_model_server_result.job_id            hHMN2Ryuy8itKNzzdbpMqw 
_model_server_result.datetime_utc      '2024-11-14 20:05:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":702}' 
#
_entry.id    6M79 
#
_exptl.entry_id    6M79 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6M79 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M79 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OD1 ASP 406 A ASP 406 1_555 E N6 AMP . A AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale2 B OD1 ASP 406 B ASP 406 1_555 G N6 AMP . B AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale3 C OD1 ASP 406 C ASP 406 1_555 I N6 AMP . C AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale4 D OD1 ASP 406 D ASP 406 1_555 K N6 AMP . D AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6M79 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AMP A 1 701 701 AMP AMP . 
F 3 FAD A 1 702 702 FAD FAD . 
G 2 AMP B 1 701 701 AMP AMP . 
H 3 FAD B 1 702 702 FAD FAD . 
I 2 AMP C 1 701 701 AMP AMP . 
J 3 FAD C 1 702 702 FAD FAD . 
K 2 AMP D 1 701 701 AMP AMP . 
L 3 FAD D 1 702 702 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 3 148.672 149.12 139.13 1 10.82 ? PA FAD 702 A 1 
HETATM 2 O O1A FAD . . . F 3 148.535 148.351 137.884 1 10.06 ? O1A FAD 702 A 1 
HETATM 3 O O2A FAD . . . F 3 147.752 150.313 139.3 1 10.35 ? O2A FAD 702 A 1 
HETATM 4 O O5B FAD . . . F 3 150.133 149.583 139.297 1 11 ? O5B FAD 702 A 1 
HETATM 5 C C5B FAD . . . F 3 151.05 149.61 138.183 1 10.24 ? C5B FAD 702 A 1 
HETATM 6 C C4B FAD . . . F 3 152.436 149.701 138.763 1 10.09 ? C4B FAD 702 A 1 
HETATM 7 O O4B FAD . . . F 3 152.661 151.048 139.215 1 11.67 ? O4B FAD 702 A 1 
HETATM 8 C C3B FAD . . . F 3 152.648 148.833 139.992 1 10.61 ? C3B FAD 702 A 1 
HETATM 9 O O3B FAD . . . F 3 153.136 147.554 139.618 1 10.09 ? O3B FAD 702 A 1 
HETATM 10 C C2B FAD . . . F 3 153.711 149.598 140.777 1 11.96 ? C2B FAD 702 A 1 
HETATM 11 O O2B FAD . . . F 3 155.011 149.21 140.363 1 11.48 ? O2B FAD 702 A 1 
HETATM 12 C C1B FAD . . . F 3 153.425 151.053 140.403 1 12.62 ? C1B FAD 702 A 1 
HETATM 13 N N9A FAD . . . F 3 152.692 151.804 141.411 1 13.65 ? N9A FAD 702 A 1 
HETATM 14 C C8A FAD . . . F 3 151.384 152.192 141.355 1 13.66 ? C8A FAD 702 A 1 
HETATM 15 N N7A FAD . . . F 3 150.981 152.865 142.404 1 13.22 ? N7A FAD 702 A 1 
HETATM 16 C C5A FAD . . . F 3 152.109 152.931 143.202 1 13.57 ? C5A FAD 702 A 1 
HETATM 17 C C6A FAD . . . F 3 152.351 153.517 144.458 1 12.06 ? C6A FAD 702 A 1 
HETATM 18 N N6A FAD . . . F 3 151.426 154.175 145.16 1 10.81 ? N6A FAD 702 A 1 
HETATM 19 N N1A FAD . . . F 3 153.586 153.395 144.979 1 13.42 ? N1A FAD 702 A 1 
HETATM 20 C C2A FAD . . . F 3 154.513 152.735 144.284 1 12.78 ? C2A FAD 702 A 1 
HETATM 21 N N3A FAD . . . F 3 154.405 152.149 143.093 1 11.81 ? N3A FAD 702 A 1 
HETATM 22 C C4A FAD . . . F 3 153.172 152.281 142.603 1 13.16 ? C4A FAD 702 A 1 
HETATM 23 N N1 FAD . . . F 3 153.868 148.419 146.114 1 10.43 ? N1 FAD 702 A 1 
HETATM 24 C C2 FAD . . . F 3 154.78 147.422 145.95 1 11.3 ? C2 FAD 702 A 1 
HETATM 25 O O2 FAD . . . F 3 155.206 147.115 144.835 1 12.28 ? O2 FAD 702 A 1 
HETATM 26 N N3 FAD . . . F 3 155.244 146.739 147.047 1 12.15 ? N3 FAD 702 A 1 
HETATM 27 C C4 FAD . . . F 3 154.878 146.954 148.34 1 11.28 ? C4 FAD 702 A 1 
HETATM 28 O O4 FAD . . . F 3 155.362 146.274 149.24 1 11.66 ? O4 FAD 702 A 1 
HETATM 29 C C4X FAD . . . F 3 153.91 148.01 148.506 1 9.7 ? C4X FAD 702 A 1 
HETATM 30 N N5 FAD . . . F 3 153.51 148.279 149.698 1 10.44 ? N5 FAD 702 A 1 
HETATM 31 C C5X FAD . . . F 3 152.59 149.286 149.86 1 11.51 ? C5X FAD 702 A 1 
HETATM 32 C C6 FAD . . . F 3 152.148 149.583 151.143 1 11.3 ? C6 FAD 702 A 1 
HETATM 33 C C7 FAD . . . F 3 151.216 150.588 151.361 1 11.3 ? C7 FAD 702 A 1 
HETATM 34 C C7M FAD . . . F 3 150.761 150.883 152.763 1 12.27 ? C7M FAD 702 A 1 
HETATM 35 C C8 FAD . . . F 3 150.713 151.314 150.272 1 11.13 ? C8 FAD 702 A 1 
HETATM 36 C C8M FAD . . . F 3 149.708 152.411 150.475 1 12.69 ? C8M FAD 702 A 1 
HETATM 37 C C9 FAD . . . F 3 151.154 151.021 148.988 1 10.67 ? C9 FAD 702 A 1 
HETATM 38 C C9A FAD . . . F 3 152.084 150.014 148.776 1 10.77 ? C9A FAD 702 A 1 
HETATM 39 N N10 FAD . . . F 3 152.533 149.67 147.488 1 11.73 ? N10 FAD 702 A 1 
HETATM 40 C C10 FAD . . . F 3 153.463 148.687 147.322 1 10.56 ? C10 FAD 702 A 1 
HETATM 41 C C1' FAD . . . F 3 152.079 150.413 146.307 1 10.47 ? C1' FAD 702 A 1 
HETATM 42 C C2' FAD . . . F 3 150.766 149.913 145.718 1 13.27 ? C2' FAD 702 A 1 
HETATM 43 O O2' FAD . . . F 3 149.861 149.531 146.749 1 15.16 ? O2' FAD 702 A 1 
HETATM 44 C C3' FAD . . . F 3 151.043 148.731 144.791 1 13.6 ? C3' FAD 702 A 1 
HETATM 45 O O3' FAD . . . F 3 152.221 149.005 144.047 1 13.98 ? O3' FAD 702 A 1 
HETATM 46 C C4' FAD . . . F 3 149.938 148.414 143.794 1 12.43 ? C4' FAD 702 A 1 
HETATM 47 O O4' FAD . . . F 3 148.928 147.646 144.443 1 14.61 ? O4' FAD 702 A 1 
HETATM 48 C C5' FAD . . . F 3 150.468 147.646 142.605 1 9.77 ? C5' FAD 702 A 1 
HETATM 49 O O5' FAD . . . F 3 149.437 146.771 142.11 1 13.57 ? O5' FAD 702 A 1 
HETATM 50 P P FAD . . . F 3 149.054 146.754 140.593 1 11.13 ? P FAD 702 A 1 
HETATM 51 O O1P FAD . . . F 3 150.304 146.648 139.723 1 12.81 ? O1P FAD 702 A 1 
HETATM 52 O O2P FAD . . . F 3 148.078 145.756 140.336 1 9.85 ? O2P FAD 702 A 1 
HETATM 53 O O3P FAD . . . F 3 148.44 148.177 140.38 1 10.83 ? O3P FAD 702 A 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#