data_6M79
#
_model_server_result.job_id            EZAc4j2UpXpcJJaYYSyVVw 
_model_server_result.datetime_utc      '2024-11-14 20:01:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":702}' 
#
_entry.id    6M79 
#
_exptl.entry_id    6M79 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6M79 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M79 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OD1 ASP 406 A ASP 406 1_555 E N6 AMP . A AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale2 B OD1 ASP 406 B ASP 406 1_555 G N6 AMP . B AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale3 C OD1 ASP 406 C ASP 406 1_555 I N6 AMP . C AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale4 D OD1 ASP 406 D ASP 406 1_555 K N6 AMP . D AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6M79 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AMP A 1 701 701 AMP AMP . 
F 3 FAD A 1 702 702 FAD FAD . 
G 2 AMP B 1 701 701 AMP AMP . 
H 3 FAD B 1 702 702 FAD FAD . 
I 2 AMP C 1 701 701 AMP AMP . 
J 3 FAD C 1 702 702 FAD FAD . 
K 2 AMP D 1 701 701 AMP AMP . 
L 3 FAD D 1 702 702 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . H 3 155.343 135.098 104.166 1 10.82 ? PA FAD 702 B 1 
HETATM 2 O O1A FAD . . . H 3 154.655 135.485 105.407 1 8.2 ? O1A FAD 702 B 1 
HETATM 3 O O2A FAD . . . H 3 155.686 133.63 104.006 1 10.33 ? O2A FAD 702 B 1 
HETATM 4 O O5B FAD . . . H 3 156.626 135.936 104 1 10.85 ? O5B FAD 702 B 1 
HETATM 5 C C5B FAD . . . H 3 157.222 136.636 105.113 1 9.58 ? C5B FAD 702 B 1 
HETATM 6 C C4B FAD . . . H 3 158.171 137.648 104.532 1 10.67 ? C4B FAD 702 B 1 
HETATM 7 O O4B FAD . . . H 3 159.358 136.968 104.088 1 9.27 ? O4B FAD 702 B 1 
HETATM 8 C C3B FAD . . . H 3 157.638 138.354 103.296 1 10.69 ? C3B FAD 702 B 1 
HETATM 9 O O3B FAD . . . H 3 156.955 139.543 103.661 1 11.03 ? O3B FAD 702 B 1 
HETATM 10 C C2B FAD . . . H 3 158.906 138.69 102.515 1 9.81 ? C2B FAD 702 B 1 
HETATM 11 O O2B FAD . . . H 3 159.426 139.944 102.924 1 11.86 ? O2B FAD 702 B 1 
HETATM 12 C C1B FAD . . . H 3 159.851 137.551 102.899 1 9.71 ? C1B FAD 702 B 1 
HETATM 13 N N9A FAD . . . H 3 159.973 136.502 101.897 1 11.91 ? N9A FAD 702 B 1 
HETATM 14 C C8A FAD . . . H 3 159.446 135.244 101.958 1 10.9 ? C8A FAD 702 B 1 
HETATM 15 N N7A FAD . . . H 3 159.717 134.501 100.914 1 10.49 ? N7A FAD 702 B 1 
HETATM 16 C C5A FAD . . . H 3 160.485 135.328 100.115 1 12.2 ? C5A FAD 702 B 1 
HETATM 17 C C6A FAD . . . H 3 161.098 135.138 98.863 1 12.14 ? C6A FAD 702 B 1 
HETATM 18 N N6A FAD . . . H 3 161.025 134.002 98.166 1 9.34 ? N6A FAD 702 B 1 
HETATM 19 N N1A FAD . . . H 3 161.786 136.17 98.338 1 12.96 ? N1A FAD 702 B 1 
HETATM 20 C C2A FAD . . . H 3 161.858 137.309 99.027 1 10.86 ? C2A FAD 702 B 1 
HETATM 21 N N3A FAD . . . H 3 161.33 137.602 100.215 1 10.06 ? N3A FAD 702 B 1 
HETATM 22 C C4A FAD . . . H 3 160.652 136.566 100.708 1 11.73 ? C4A FAD 702 B 1 
HETATM 23 N N1 FAD . . . H 3 158.115 139.528 97.169 1 7.86 ? N1 FAD 702 B 1 
HETATM 24 C C2 FAD . . . H 3 157.918 140.866 97.325 1 8.83 ? C2 FAD 702 B 1 
HETATM 25 O O2 FAD . . . H 3 157.944 141.396 98.437 1 11.24 ? O2 FAD 702 B 1 
HETATM 26 N N3 FAD . . . H 3 157.687 141.652 96.224 1 11.63 ? N3 FAD 702 B 1 
HETATM 27 C C4 FAD . . . H 3 157.627 141.225 94.932 1 10.35 ? C4 FAD 702 B 1 
HETATM 28 O O4 FAD . . . H 3 157.411 142.025 94.027 1 9.97 ? O4 FAD 702 B 1 
HETATM 29 C C4X FAD . . . H 3 157.834 139.806 94.774 1 8.63 ? C4X FAD 702 B 1 
HETATM 30 N N5 FAD . . . H 3 157.795 139.32 93.586 1 10.2 ? N5 FAD 702 B 1 
HETATM 31 C C5X FAD . . . H 3 157.994 137.969 93.432 1 9.73 ? C5X FAD 702 B 1 
HETATM 32 C C6 FAD . . . H 3 157.95 137.432 92.152 1 9.26 ? C6 FAD 702 B 1 
HETATM 33 C C7 FAD . . . H 3 158.14 136.073 91.941 1 11.08 ? C7 FAD 702 B 1 
HETATM 34 C C7M FAD . . . H 3 158.087 135.526 90.542 1 11.49 ? C7M FAD 702 B 1 
HETATM 35 C C8 FAD . . . H 3 158.38 135.23 93.036 1 11.2 ? C8 FAD 702 B 1 
HETATM 36 C C8M FAD . . . H 3 158.595 133.757 92.842 1 8.83 ? C8M FAD 702 B 1 
HETATM 37 C C9 FAD . . . H 3 158.426 135.764 94.317 1 12.16 ? C9 FAD 702 B 1 
HETATM 38 C C9A FAD . . . H 3 158.233 137.123 94.522 1 9.71 ? C9A FAD 702 B 1 
HETATM 39 N N10 FAD . . . H 3 158.245 137.695 95.806 1 10.48 ? N10 FAD 702 B 1 
HETATM 40 C C10 FAD . . . H 3 158.071 139.038 95.964 1 9.4 ? C10 FAD 702 B 1 
HETATM 41 C C1' FAD . . . H 3 158.529 136.88 96.993 1 11.31 ? C1' FAD 702 B 1 
HETATM 42 C C2' FAD . . . H 3 157.309 136.183 97.581 1 11.72 ? C2' FAD 702 B 1 
HETATM 43 O O2' FAD . . . H 3 156.444 135.717 96.548 1 13.47 ? O2' FAD 702 B 1 
HETATM 44 C C3' FAD . . . H 3 156.565 137.149 98.499 1 12.24 ? C3' FAD 702 B 1 
HETATM 45 O O3' FAD . . . H 3 157.518 137.893 99.243 1 10.44 ? O3' FAD 702 B 1 
HETATM 46 C C4' FAD . . . H 3 155.615 136.499 99.496 1 11.25 ? C4' FAD 702 B 1 
HETATM 47 O O4' FAD . . . H 3 154.385 136.199 98.843 1 13.29 ? O4' FAD 702 B 1 
HETATM 48 C C5' FAD . . . H 3 155.351 137.402 100.678 1 10.13 ? C5' FAD 702 B 1 
HETATM 49 O O5' FAD . . . H 3 154.019 137.159 101.17 1 11.63 ? O5' FAD 702 B 1 
HETATM 50 P P FAD . . . H 3 153.757 136.882 102.687 1 9.98 ? P FAD 702 B 1 
HETATM 51 O O1P FAD . . . H 3 154.462 137.921 103.554 1 10.58 ? O1P FAD 702 B 1 
HETATM 52 O O2P FAD . . . H 3 152.366 136.758 102.938 1 8.74 ? O2P FAD 702 B 1 
HETATM 53 O O3P FAD . . . H 3 154.47 135.507 102.91 1 8.84 ? O3P FAD 702 B 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    55 
_model_server_stats.query_time_ms           500 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#