data_6M79
#
_model_server_result.job_id            abZfR4eGdcrNq0k54XWFYg 
_model_server_result.datetime_utc      '2024-11-14 19:59:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":702}' 
#
_entry.id    6M79 
#
_exptl.entry_id    6M79 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6M79 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M79 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OD1 ASP 406 A ASP 406 1_555 E N6 AMP . A AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale2 B OD1 ASP 406 B ASP 406 1_555 G N6 AMP . B AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale3 C OD1 ASP 406 C ASP 406 1_555 I N6 AMP . C AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale4 D OD1 ASP 406 D ASP 406 1_555 K N6 AMP . D AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6M79 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AMP A 1 701 701 AMP AMP . 
F 3 FAD A 1 702 702 FAD FAD . 
G 2 AMP B 1 701 701 AMP AMP . 
H 3 FAD B 1 702 702 FAD FAD . 
I 2 AMP C 1 701 701 AMP AMP . 
J 3 FAD C 1 702 702 FAD FAD . 
K 2 AMP D 1 701 701 AMP AMP . 
L 3 FAD D 1 702 702 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . J 3 117.722 117.281 139.13 1 10.82 ? PA FAD 702 C 1 
HETATM 2 O O1A FAD . . . J 3 117.859 118.05 137.884 1 10.06 ? O1A FAD 702 C 1 
HETATM 3 O O2A FAD . . . J 3 118.642 116.088 139.299 1 10.35 ? O2A FAD 702 C 1 
HETATM 4 O O5B FAD . . . J 3 116.261 116.818 139.296 1 11 ? O5B FAD 702 C 1 
HETATM 5 C C5B FAD . . . J 3 115.344 116.792 138.182 1 10.24 ? C5B FAD 702 C 1 
HETATM 6 C C4B FAD . . . J 3 113.959 116.701 138.762 1 10.09 ? C4B FAD 702 C 1 
HETATM 7 O O4B FAD . . . J 3 113.733 115.354 139.214 1 11.67 ? O4B FAD 702 C 1 
HETATM 8 C C3B FAD . . . J 3 113.746 117.568 139.992 1 10.61 ? C3B FAD 702 C 1 
HETATM 9 O O3B FAD . . . J 3 113.258 118.847 139.617 1 10.09 ? O3B FAD 702 C 1 
HETATM 10 C C2B FAD . . . J 3 112.684 116.804 140.776 1 11.96 ? C2B FAD 702 C 1 
HETATM 11 O O2B FAD . . . J 3 111.384 117.191 140.362 1 11.48 ? O2B FAD 702 C 1 
HETATM 12 C C1B FAD . . . J 3 112.969 115.349 140.402 1 12.62 ? C1B FAD 702 C 1 
HETATM 13 N N9A FAD . . . J 3 113.702 114.597 141.41 1 13.65 ? N9A FAD 702 C 1 
HETATM 14 C C8A FAD . . . J 3 115.01 114.209 141.354 1 13.66 ? C8A FAD 702 C 1 
HETATM 15 N N7A FAD . . . J 3 115.413 113.536 142.403 1 13.22 ? N7A FAD 702 C 1 
HETATM 16 C C5A FAD . . . J 3 114.286 113.47 143.201 1 13.57 ? C5A FAD 702 C 1 
HETATM 17 C C6A FAD . . . J 3 114.043 112.884 144.457 1 12.06 ? C6A FAD 702 C 1 
HETATM 18 N N6A FAD . . . J 3 114.968 112.226 145.159 1 10.81 ? N6A FAD 702 C 1 
HETATM 19 N N1A FAD . . . J 3 112.808 113.007 144.978 1 13.42 ? N1A FAD 702 C 1 
HETATM 20 C C2A FAD . . . J 3 111.881 113.666 144.283 1 12.78 ? C2A FAD 702 C 1 
HETATM 21 N N3A FAD . . . J 3 111.989 114.253 143.092 1 11.81 ? N3A FAD 702 C 1 
HETATM 22 C C4A FAD . . . J 3 113.222 114.12 142.602 1 13.16 ? C4A FAD 702 C 1 
HETATM 23 N N1 FAD . . . J 3 112.526 117.982 146.114 1 10.43 ? N1 FAD 702 C 1 
HETATM 24 C C2 FAD . . . J 3 111.615 118.979 145.95 1 11.3 ? C2 FAD 702 C 1 
HETATM 25 O O2 FAD . . . J 3 111.189 119.287 144.835 1 12.28 ? O2 FAD 702 C 1 
HETATM 26 N N3 FAD . . . J 3 111.151 119.663 147.046 1 12.15 ? N3 FAD 702 C 1 
HETATM 27 C C4 FAD . . . J 3 111.516 119.447 148.34 1 11.28 ? C4 FAD 702 C 1 
HETATM 28 O O4 FAD . . . J 3 111.033 120.127 149.24 1 11.66 ? O4 FAD 702 C 1 
HETATM 29 C C4X FAD . . . J 3 112.485 118.391 148.506 1 9.7 ? C4X FAD 702 C 1 
HETATM 30 N N5 FAD . . . J 3 112.884 118.122 149.697 1 10.44 ? N5 FAD 702 C 1 
HETATM 31 C C5X FAD . . . J 3 113.804 117.114 149.859 1 11.51 ? C5X FAD 702 C 1 
HETATM 32 C C6 FAD . . . J 3 114.247 116.817 151.142 1 11.3 ? C6 FAD 702 C 1 
HETATM 33 C C7 FAD . . . J 3 115.178 115.812 151.36 1 11.3 ? C7 FAD 702 C 1 
HETATM 34 C C7M FAD . . . J 3 115.634 115.517 152.762 1 12.27 ? C7M FAD 702 C 1 
HETATM 35 C C8 FAD . . . J 3 115.682 115.086 150.271 1 11.13 ? C8 FAD 702 C 1 
HETATM 36 C C8M FAD . . . J 3 116.686 113.989 150.474 1 12.69 ? C8M FAD 702 C 1 
HETATM 37 C C9 FAD . . . J 3 115.241 115.379 148.987 1 10.67 ? C9 FAD 702 C 1 
HETATM 38 C C9A FAD . . . J 3 114.311 116.386 148.775 1 10.77 ? C9A FAD 702 C 1 
HETATM 39 N N10 FAD . . . J 3 113.862 116.731 147.488 1 11.73 ? N10 FAD 702 C 1 
HETATM 40 C C10 FAD . . . J 3 112.932 117.714 147.322 1 10.56 ? C10 FAD 702 C 1 
HETATM 41 C C1' FAD . . . J 3 114.315 115.988 146.307 1 10.47 ? C1' FAD 702 C 1 
HETATM 42 C C2' FAD . . . J 3 115.628 116.488 145.717 1 13.27 ? C2' FAD 702 C 1 
HETATM 43 O O2' FAD . . . J 3 116.534 116.87 146.748 1 15.16 ? O2' FAD 702 C 1 
HETATM 44 C C3' FAD . . . J 3 115.351 117.669 144.791 1 13.6 ? C3' FAD 702 C 1 
HETATM 45 O O3' FAD . . . J 3 114.174 117.396 144.046 1 13.98 ? O3' FAD 702 C 1 
HETATM 46 C C4' FAD . . . J 3 116.457 117.987 143.793 1 12.43 ? C4' FAD 702 C 1 
HETATM 47 O O4' FAD . . . J 3 117.466 118.754 144.442 1 14.61 ? O4' FAD 702 C 1 
HETATM 48 C C5' FAD . . . J 3 115.927 118.755 142.605 1 9.77 ? C5' FAD 702 C 1 
HETATM 49 O O5' FAD . . . J 3 116.958 119.63 142.109 1 13.57 ? O5' FAD 702 C 1 
HETATM 50 P P FAD . . . J 3 117.341 119.647 140.592 1 11.13 ? P FAD 702 C 1 
HETATM 51 O O1P FAD . . . J 3 116.091 119.753 139.723 1 12.81 ? O1P FAD 702 C 1 
HETATM 52 O O2P FAD . . . J 3 118.317 120.645 140.336 1 9.85 ? O2P FAD 702 C 1 
HETATM 53 O O3P FAD . . . J 3 117.955 118.224 140.38 1 10.83 ? O3P FAD 702 C 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    44 
_model_server_stats.query_time_ms           351 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#