data_6M79
#
_model_server_result.job_id            zTqKhW0-rDey7ARJuzc8_Q 
_model_server_result.datetime_utc      '2024-11-14 20:07:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6m79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":702}' 
#
_entry.id    6M79 
#
_exptl.entry_id    6M79 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6M79 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6M79 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OD1 ASP 406 A ASP 406 1_555 E N6 AMP . A AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale2 B OD1 ASP 406 B ASP 406 1_555 G N6 AMP . B AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale3 C OD1 ASP 406 C ASP 406 1_555 I N6 AMP . C AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale4 D OD1 ASP 406 D ASP 406 1_555 K N6 AMP . D AMP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6M79 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AMP A 1 701 701 AMP AMP . 
F 3 FAD A 1 702 702 FAD FAD . 
G 2 AMP B 1 701 701 AMP AMP . 
H 3 FAD B 1 702 702 FAD FAD . 
I 2 AMP C 1 701 701 AMP AMP . 
J 3 FAD C 1 702 702 FAD FAD . 
K 2 AMP D 1 701 701 AMP AMP . 
L 3 FAD D 1 702 702 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . L 3 111.055 131.302 104.164 1 10.82 ? PA FAD 702 D 1 
HETATM 2 O O1A FAD . . . L 3 111.742 130.915 105.405 1 8.2 ? O1A FAD 702 D 1 
HETATM 3 O O2A FAD . . . L 3 110.712 132.769 104.005 1 10.33 ? O2A FAD 702 D 1 
HETATM 4 O O5B FAD . . . L 3 109.771 130.464 103.998 1 10.85 ? O5B FAD 702 D 1 
HETATM 5 C C5B FAD . . . L 3 109.176 129.764 105.111 1 9.58 ? C5B FAD 702 D 1 
HETATM 6 C C4B FAD . . . L 3 108.226 128.751 104.529 1 10.67 ? C4B FAD 702 D 1 
HETATM 7 O O4B FAD . . . L 3 107.039 129.431 104.086 1 9.27 ? O4B FAD 702 D 1 
HETATM 8 C C3B FAD . . . L 3 108.759 128.045 103.293 1 10.69 ? C3B FAD 702 D 1 
HETATM 9 O O3B FAD . . . L 3 109.443 126.856 103.658 1 11.03 ? O3B FAD 702 D 1 
HETATM 10 C C2B FAD . . . L 3 107.492 127.71 102.513 1 9.81 ? C2B FAD 702 D 1 
HETATM 11 O O2B FAD . . . L 3 106.972 126.455 102.922 1 11.86 ? O2B FAD 702 D 1 
HETATM 12 C C1B FAD . . . L 3 106.547 128.849 102.897 1 9.71 ? C1B FAD 702 D 1 
HETATM 13 N N9A FAD . . . L 3 106.424 129.898 101.895 1 11.91 ? N9A FAD 702 D 1 
HETATM 14 C C8A FAD . . . L 3 106.951 131.156 101.956 1 10.9 ? C8A FAD 702 D 1 
HETATM 15 N N7A FAD . . . L 3 106.68 131.899 100.912 1 10.49 ? N7A FAD 702 D 1 
HETATM 16 C C5A FAD . . . L 3 105.913 131.072 100.112 1 12.2 ? C5A FAD 702 D 1 
HETATM 17 C C6A FAD . . . L 3 105.3 131.262 98.86 1 12.14 ? C6A FAD 702 D 1 
HETATM 18 N N6A FAD . . . L 3 105.372 132.398 98.164 1 9.34 ? N6A FAD 702 D 1 
HETATM 19 N N1A FAD . . . L 3 104.612 130.231 98.336 1 12.96 ? N1A FAD 702 D 1 
HETATM 20 C C2A FAD . . . L 3 104.539 129.091 99.025 1 10.86 ? C2A FAD 702 D 1 
HETATM 21 N N3A FAD . . . L 3 105.067 128.798 100.213 1 10.06 ? N3A FAD 702 D 1 
HETATM 22 C C4A FAD . . . L 3 105.746 129.834 100.705 1 11.73 ? C4A FAD 702 D 1 
HETATM 23 N N1 FAD . . . L 3 108.283 126.872 97.167 1 7.86 ? N1 FAD 702 D 1 
HETATM 24 C C2 FAD . . . L 3 108.48 125.535 97.322 1 8.83 ? C2 FAD 702 D 1 
HETATM 25 O O2 FAD . . . L 3 108.453 125.004 98.435 1 11.24 ? O2 FAD 702 D 1 
HETATM 26 N N3 FAD . . . L 3 108.711 124.749 96.221 1 11.63 ? N3 FAD 702 D 1 
HETATM 27 C C4 FAD . . . L 3 108.771 125.175 94.929 1 10.35 ? C4 FAD 702 D 1 
HETATM 28 O O4 FAD . . . L 3 108.988 124.376 94.024 1 9.97 ? O4 FAD 702 D 1 
HETATM 29 C C4X FAD . . . L 3 108.564 126.595 94.772 1 8.63 ? C4X FAD 702 D 1 
HETATM 30 N N5 FAD . . . L 3 108.604 127.081 93.583 1 10.2 ? N5 FAD 702 D 1 
HETATM 31 C C5X FAD . . . L 3 108.404 128.432 93.429 1 9.73 ? C5X FAD 702 D 1 
HETATM 32 C C6 FAD . . . L 3 108.449 128.969 92.149 1 9.26 ? C6 FAD 702 D 1 
HETATM 33 C C7 FAD . . . L 3 108.258 130.328 91.939 1 11.08 ? C7 FAD 702 D 1 
HETATM 34 C C7M FAD . . . L 3 108.312 130.875 90.54 1 11.49 ? C7M FAD 702 D 1 
HETATM 35 C C8 FAD . . . L 3 108.018 131.171 93.034 1 11.2 ? C8 FAD 702 D 1 
HETATM 36 C C8M FAD . . . L 3 107.803 132.644 92.841 1 8.83 ? C8M FAD 702 D 1 
HETATM 37 C C9 FAD . . . L 3 107.972 130.637 94.315 1 12.16 ? C9 FAD 702 D 1 
HETATM 38 C C9A FAD . . . L 3 108.165 129.278 94.519 1 9.71 ? C9A FAD 702 D 1 
HETATM 39 N N10 FAD . . . L 3 108.153 128.705 95.803 1 10.48 ? N10 FAD 702 D 1 
HETATM 40 C C10 FAD . . . L 3 108.327 127.363 95.961 1 9.4 ? C10 FAD 702 D 1 
HETATM 41 C C1' FAD . . . L 3 107.869 129.52 96.99 1 11.31 ? C1' FAD 702 D 1 
HETATM 42 C C2' FAD . . . L 3 109.089 130.218 97.578 1 11.72 ? C2' FAD 702 D 1 
HETATM 43 O O2' FAD . . . L 3 109.953 130.683 96.546 1 13.47 ? O2' FAD 702 D 1 
HETATM 44 C C3' FAD . . . L 3 109.833 129.251 98.497 1 12.24 ? C3' FAD 702 D 1 
HETATM 45 O O3' FAD . . . L 3 108.88 128.507 99.241 1 10.44 ? O3' FAD 702 D 1 
HETATM 46 C C4' FAD . . . L 3 110.782 129.901 99.494 1 11.25 ? C4' FAD 702 D 1 
HETATM 47 O O4' FAD . . . L 3 112.013 130.201 98.841 1 13.29 ? O4' FAD 702 D 1 
HETATM 48 C C5' FAD . . . L 3 111.047 128.998 100.676 1 10.13 ? C5' FAD 702 D 1 
HETATM 49 O O5' FAD . . . L 3 112.379 129.241 101.168 1 11.63 ? O5' FAD 702 D 1 
HETATM 50 P P FAD . . . L 3 112.64 129.518 102.685 1 9.98 ? P FAD 702 D 1 
HETATM 51 O O1P FAD . . . L 3 111.936 128.478 103.552 1 10.58 ? O1P FAD 702 D 1 
HETATM 52 O O2P FAD . . . L 3 114.032 129.642 102.937 1 8.74 ? O2P FAD 702 D 1 
HETATM 53 O O3P FAD . . . L 3 111.927 130.892 102.908 1 8.84 ? O3P FAD 702 D 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#