data_6M89 # _model_server_result.job_id cugRyIHtoBBbgwDYXz6XGA _model_server_result.datetime_utc '2024-11-27 03:09:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m89 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 6M89 # _exptl.entry_id 6M89 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.236 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,5,7,3',4'-PENTAHYDROXYFLAVONE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M89 _cell.length_a 77.956 _cell.length_b 77.956 _cell.length_c 84.468 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M89 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H10 O7' _chem_comp.formula_weight 302.236 _chem_comp.id QUE _chem_comp.mon_nstd_flag . _chem_comp.name "3,5,7,3',4'-PENTAHYDROXYFLAVONE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms QUERCETIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 QUE doub 277 n y C1 C6 QUE sing 278 n y C1 H1 QUE sing 279 n n C2 C3 QUE sing 280 n y C2 O30 QUE sing 281 n n C3 C4 QUE doub 282 n y C3 C9 QUE sing 283 n y C4 C5 QUE sing 284 n y C4 O12 QUE sing 285 n y C5 C6 QUE doub 286 n y C5 H5 QUE sing 287 n n C6 O29 QUE sing 288 n n C9 C10 QUE sing 289 n y C9 O13 QUE doub 290 n n C10 C11 QUE doub 291 n y C10 O27 QUE sing 292 n n C11 C14 QUE sing 293 n y C11 O12 QUE sing 294 n y C14 C15 QUE doub 295 n y C14 C19 QUE sing 296 n y C15 C16 QUE sing 297 n y C15 H15 QUE sing 298 n n C16 C17 QUE doub 299 n y C16 H16 QUE sing 300 n n C17 C18 QUE sing 301 n y C17 O24 QUE sing 302 n n C18 C19 QUE doub 303 n y C18 O23 QUE sing 304 n n C19 H19 QUE sing 305 n n O23 HO3 QUE sing 306 n n O24 HO4 QUE sing 307 n n O27 HO7 QUE sing 308 n n O29 HO9 QUE sing 309 n n O30 HO0 QUE sing 310 n n # _atom_sites.entry_id 6M89 _atom_sites.fract_transf_matrix[1][1] 0.012828 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QUE A 1 1001 1001 QUE QUE . C 3 HOH A 1 1101 97 HOH HOH . C 3 HOH A 2 1102 86 HOH HOH . C 3 HOH A 3 1103 18 HOH HOH . C 3 HOH A 4 1104 78 HOH HOH . C 3 HOH A 5 1105 54 HOH HOH . C 3 HOH A 6 1106 46 HOH HOH . C 3 HOH A 7 1107 66 HOH HOH . C 3 HOH A 8 1108 108 HOH HOH . C 3 HOH A 9 1109 42 HOH HOH . C 3 HOH A 10 1110 70 HOH HOH . C 3 HOH A 11 1111 12 HOH HOH . C 3 HOH A 12 1112 31 HOH HOH . C 3 HOH A 13 1113 20 HOH HOH . C 3 HOH A 14 1114 19 HOH HOH . C 3 HOH A 15 1115 53 HOH HOH . C 3 HOH A 16 1116 35 HOH HOH . C 3 HOH A 17 1117 49 HOH HOH . C 3 HOH A 18 1118 109 HOH HOH . C 3 HOH A 19 1119 62 HOH HOH . C 3 HOH A 20 1120 50 HOH HOH . C 3 HOH A 21 1121 52 HOH HOH . C 3 HOH A 22 1122 26 HOH HOH . C 3 HOH A 23 1123 80 HOH HOH . C 3 HOH A 24 1124 121 HOH HOH . C 3 HOH A 25 1125 41 HOH HOH . C 3 HOH A 26 1126 8 HOH HOH . C 3 HOH A 27 1127 68 HOH HOH . C 3 HOH A 28 1128 44 HOH HOH . C 3 HOH A 29 1129 60 HOH HOH . C 3 HOH A 30 1130 22 HOH HOH . C 3 HOH A 31 1131 77 HOH HOH . C 3 HOH A 32 1132 47 HOH HOH . C 3 HOH A 33 1133 30 HOH HOH . C 3 HOH A 34 1134 37 HOH HOH . C 3 HOH A 35 1135 87 HOH HOH . C 3 HOH A 36 1136 122 HOH HOH . C 3 HOH A 37 1137 76 HOH HOH . C 3 HOH A 38 1138 36 HOH HOH . C 3 HOH A 39 1139 13 HOH HOH . C 3 HOH A 40 1140 57 HOH HOH . C 3 HOH A 41 1141 48 HOH HOH . C 3 HOH A 42 1142 74 HOH HOH . C 3 HOH A 43 1143 95 HOH HOH . C 3 HOH A 44 1144 91 HOH HOH . C 3 HOH A 45 1145 98 HOH HOH . C 3 HOH A 46 1146 6 HOH HOH . C 3 HOH A 47 1147 82 HOH HOH . C 3 HOH A 48 1148 73 HOH HOH . C 3 HOH A 49 1149 69 HOH HOH . C 3 HOH A 50 1150 64 HOH HOH . C 3 HOH A 51 1151 33 HOH HOH . C 3 HOH A 52 1152 90 HOH HOH . C 3 HOH A 53 1153 1 HOH HOH . C 3 HOH A 54 1154 111 HOH HOH . C 3 HOH A 55 1155 15 HOH HOH . C 3 HOH A 56 1156 4 HOH HOH . C 3 HOH A 57 1157 9 HOH HOH . C 3 HOH A 58 1158 120 HOH HOH . C 3 HOH A 59 1159 102 HOH HOH . C 3 HOH A 60 1160 99 HOH HOH . C 3 HOH A 61 1161 32 HOH HOH . C 3 HOH A 62 1162 3 HOH HOH . C 3 HOH A 63 1163 28 HOH HOH . C 3 HOH A 64 1164 71 HOH HOH . C 3 HOH A 65 1165 65 HOH HOH . C 3 HOH A 66 1166 10 HOH HOH . C 3 HOH A 67 1167 2 HOH HOH . C 3 HOH A 68 1168 25 HOH HOH . C 3 HOH A 69 1169 75 HOH HOH . C 3 HOH A 70 1170 94 HOH HOH . C 3 HOH A 71 1171 100 HOH HOH . C 3 HOH A 72 1172 85 HOH HOH . C 3 HOH A 73 1173 93 HOH HOH . C 3 HOH A 74 1174 24 HOH HOH . C 3 HOH A 75 1175 89 HOH HOH . C 3 HOH A 76 1176 63 HOH HOH . C 3 HOH A 77 1177 39 HOH HOH . C 3 HOH A 78 1178 117 HOH HOH . C 3 HOH A 79 1179 51 HOH HOH . C 3 HOH A 80 1180 23 HOH HOH . C 3 HOH A 81 1181 5 HOH HOH . C 3 HOH A 82 1182 43 HOH HOH . C 3 HOH A 83 1183 14 HOH HOH . C 3 HOH A 84 1184 59 HOH HOH . C 3 HOH A 85 1185 81 HOH HOH . C 3 HOH A 86 1186 105 HOH HOH . C 3 HOH A 87 1187 21 HOH HOH . C 3 HOH A 88 1188 11 HOH HOH . C 3 HOH A 89 1189 29 HOH HOH . C 3 HOH A 90 1190 7 HOH HOH . C 3 HOH A 91 1191 55 HOH HOH . C 3 HOH A 92 1192 17 HOH HOH . C 3 HOH A 93 1193 56 HOH HOH . C 3 HOH A 94 1194 16 HOH HOH . C 3 HOH A 95 1195 45 HOH HOH . C 3 HOH A 96 1196 84 HOH HOH . C 3 HOH A 97 1197 79 HOH HOH . C 3 HOH A 98 1198 58 HOH HOH . C 3 HOH A 99 1199 92 HOH HOH . C 3 HOH A 100 1200 34 HOH HOH . C 3 HOH A 101 1201 103 HOH HOH . C 3 HOH A 102 1202 101 HOH HOH . C 3 HOH A 103 1203 40 HOH HOH . C 3 HOH A 104 1204 110 HOH HOH . C 3 HOH A 105 1205 119 HOH HOH . C 3 HOH A 106 1206 96 HOH HOH . C 3 HOH A 107 1207 106 HOH HOH . C 3 HOH A 108 1208 113 HOH HOH . C 3 HOH A 109 1209 118 HOH HOH . C 3 HOH A 110 1210 67 HOH HOH . C 3 HOH A 111 1211 104 HOH HOH . C 3 HOH A 112 1212 88 HOH HOH . C 3 HOH A 113 1213 72 HOH HOH . C 3 HOH A 114 1214 83 HOH HOH . C 3 HOH A 115 1215 61 HOH HOH . C 3 HOH A 116 1216 107 HOH HOH . C 3 HOH A 117 1217 38 HOH HOH . C 3 HOH A 118 1218 116 HOH HOH . C 3 HOH A 119 1219 114 HOH HOH . C 3 HOH A 120 1220 27 HOH HOH . C 3 HOH A 121 1221 112 HOH HOH . C 3 HOH A 122 1222 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QUE . . . B 2 7.243 24.799 21.911 1 17.42 ? C1 QUE 1001 A 1 HETATM 2 C C2 QUE . . . B 2 6.295 25.815 21.811 1 16.89 ? C2 QUE 1001 A 1 HETATM 3 C C3 QUE . . . B 2 5.798 26.472 23.029 1 17.67 ? C3 QUE 1001 A 1 HETATM 4 C C4 QUE . . . B 2 6.332 26.002 24.315 1 18.72 ? C4 QUE 1001 A 1 HETATM 5 C C5 QUE . . . B 2 7.272 24.984 24.327 1 18.38 ? C5 QUE 1001 A 1 HETATM 6 C C6 QUE . . . B 2 7.717 24.392 23.149 1 17.18 ? C6 QUE 1001 A 1 HETATM 7 C C9 QUE . . . B 2 4.793 27.557 23.025 1 18.73 ? C9 QUE 1001 A 1 HETATM 8 C C10 QUE . . . B 2 4.38 28.143 24.319 1 20.6 ? C10 QUE 1001 A 1 HETATM 9 C C11 QUE . . . B 2 4.986 27.597 25.578 1 23.19 ? C11 QUE 1001 A 1 HETATM 10 C C14 QUE . . . B 2 4.664 28.064 26.957 1 27.67 ? C14 QUE 1001 A 1 HETATM 11 C C15 QUE . . . B 2 4.087 29.317 27.237 1 29.05 ? C15 QUE 1001 A 1 HETATM 12 C C16 QUE . . . B 2 3.794 29.707 28.543 1 30.89 ? C16 QUE 1001 A 1 HETATM 13 C C17 QUE . . . B 2 4.066 28.855 29.603 1 33.04 ? C17 QUE 1001 A 1 HETATM 14 C C18 QUE . . . B 2 4.664 27.518 29.32 1 35.76 ? C18 QUE 1001 A 1 HETATM 15 C C19 QUE . . . B 2 4.941 27.171 28.007 1 30.77 ? C19 QUE 1001 A 1 HETATM 16 O O12 QUE . . . B 2 5.903 26.566 25.486 1 23.48 ? O12 QUE 1001 A 1 HETATM 17 O O13 QUE . . . B 2 4.325 27.969 21.95 1 21.24 ? O13 QUE 1001 A 1 HETATM 18 O O23 QUE . . . B 2 4.95 26.63 30.311 1 43.06 ? O23 QUE 1001 A 1 HETATM 19 O O24 QUE . . . B 2 3.776 29.252 30.866 1 36.43 ? O24 QUE 1001 A 1 HETATM 20 O O27 QUE . . . B 2 3.474 29.147 24.292 1 24.11 ? O27 QUE 1001 A 1 HETATM 21 O O29 QUE . . . B 2 8.641 23.391 23.211 1 19.84 ? O29 QUE 1001 A 1 HETATM 22 O O30 QUE . . . B 2 5.835 26.196 20.611 1 17.41 ? O30 QUE 1001 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #