data_6M90 # _model_server_result.job_id bFoWO1_iedgkGyw45LSDig _model_server_result.datetime_utc '2024-10-31 07:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":603}' # _entry.id 6M90 # _exptl.entry_id 6M90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6M90 _cell.length_a 82.76 _cell.length_b 82.76 _cell.length_c 111.82 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ASP 17 C ASP 32 1_555 C N SEP 18 C SEP 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 C C SEP 18 C SEP 33 1_555 C N GLY 19 C GLY 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 305 n n P O2 PO4 sing 306 n n P O3 PO4 sing 307 n n P O4 PO4 sing 308 n n # _atom_sites.entry_id 6M90 _atom_sites.fract_transf_matrix[1][1] 0.012083 _atom_sites.fract_transf_matrix[1][2] 0.006976 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 J91 A 1 601 1 J91 DRG . E 4 J91 A 1 602 2 J91 DRG . F 5 PO4 A 1 603 1 PO4 PO4 . G 6 HOH A 1 701 33 HOH HOH . G 6 HOH A 2 702 51 HOH HOH . G 6 HOH A 3 703 28 HOH HOH . G 6 HOH A 4 704 58 HOH HOH . G 6 HOH A 5 705 20 HOH HOH . G 6 HOH A 6 706 25 HOH HOH . G 6 HOH A 7 707 31 HOH HOH . G 6 HOH A 8 708 26 HOH HOH . G 6 HOH A 9 709 15 HOH HOH . G 6 HOH A 10 710 18 HOH HOH . G 6 HOH A 11 711 3 HOH HOH . G 6 HOH A 12 712 21 HOH HOH . G 6 HOH A 13 713 40 HOH HOH . G 6 HOH A 14 714 39 HOH HOH . G 6 HOH A 15 715 44 HOH HOH . G 6 HOH A 16 716 27 HOH HOH . G 6 HOH A 17 717 37 HOH HOH . G 6 HOH A 18 718 38 HOH HOH . G 6 HOH A 19 719 33 HOH HOH . G 6 HOH A 20 720 13 HOH HOH . G 6 HOH A 21 721 46 HOH HOH . G 6 HOH A 22 722 10 HOH HOH . G 6 HOH A 23 723 19 HOH HOH . G 6 HOH A 24 724 8 HOH HOH . G 6 HOH A 25 725 2 HOH HOH . G 6 HOH A 26 726 16 HOH HOH . G 6 HOH A 27 727 11 HOH HOH . G 6 HOH A 28 728 47 HOH HOH . G 6 HOH A 29 729 24 HOH HOH . G 6 HOH A 30 730 38 HOH HOH . G 6 HOH A 31 731 23 HOH HOH . G 6 HOH A 32 732 9 HOH HOH . G 6 HOH A 33 733 36 HOH HOH . G 6 HOH A 34 734 41 HOH HOH . G 6 HOH A 35 735 49 HOH HOH . G 6 HOH A 36 736 57 HOH HOH . G 6 HOH A 37 737 2 HOH HOH . G 6 HOH A 38 738 35 HOH HOH . G 6 HOH A 39 739 55 HOH HOH . G 6 HOH A 40 740 12 HOH HOH . G 6 HOH A 41 741 48 HOH HOH . G 6 HOH A 42 742 32 HOH HOH . G 6 HOH A 43 743 39 HOH HOH . G 6 HOH A 44 744 43 HOH HOH . G 6 HOH A 45 745 37 HOH HOH . G 6 HOH A 46 746 59 HOH HOH . G 6 HOH A 47 747 3 HOH HOH . G 6 HOH A 48 748 9 HOH HOH . G 6 HOH A 49 749 50 HOH HOH . G 6 HOH A 50 750 46 HOH HOH . G 6 HOH A 51 751 6 HOH HOH . G 6 HOH A 52 752 42 HOH HOH . G 6 HOH A 53 753 5 HOH HOH . G 6 HOH A 54 754 54 HOH HOH . G 6 HOH A 55 755 45 HOH HOH . G 6 HOH A 56 756 51 HOH HOH . G 6 HOH A 57 757 24 HOH HOH . G 6 HOH A 58 758 22 HOH HOH . G 6 HOH A 59 759 4 HOH HOH . G 6 HOH A 60 760 7 HOH HOH . G 6 HOH A 61 761 5 HOH HOH . G 6 HOH A 62 762 26 HOH HOH . G 6 HOH A 63 763 53 HOH HOH . H 6 HOH B 1 201 19 HOH HOH . H 6 HOH B 2 202 6 HOH HOH . H 6 HOH B 3 203 48 HOH HOH . H 6 HOH B 4 204 49 HOH HOH . H 6 HOH B 5 205 27 HOH HOH . H 6 HOH B 6 206 25 HOH HOH . I 6 HOH C 1 101 16 HOH HOH . I 6 HOH C 2 102 17 HOH HOH . I 6 HOH C 3 103 1 HOH HOH . I 6 HOH C 4 104 31 HOH HOH . I 6 HOH C 5 105 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 5 -7.987 25.715 1.935 1 82.19 ? P PO4 603 A 1 HETATM 2 O O1 PO4 . . . F 5 -8.161 27.012 1.177 1 81.16 ? O1 PO4 603 A 1 HETATM 3 O O2 PO4 . . . F 5 -6.516 25.387 2.024 1 72.88 ? O2 PO4 603 A 1 HETATM 4 O O3 PO4 . . . F 5 -8.735 24.617 1.212 1 91.17 ? O3 PO4 603 A 1 HETATM 5 O O4 PO4 . . . F 5 -8.541 25.845 3.334 1 93.24 ? O4 PO4 603 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #