data_6M9G # _model_server_result.job_id QJmGVz_WEdxWbEVeiFOE-w _model_server_result.datetime_utc '2024-11-01 01:34:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":311}' # _entry.id 6M9G # _exptl.entry_id 6M9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6M9G _cell.length_a 86.106 _cell.length_b 173.304 _cell.length_c 107.054 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,W 1 1 B,P,Q,R,S,T,U,V,X 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 53.527 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 6M9G _atom_sites.fract_transf_matrix[1][1] 0.011614 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00577 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TBR A 1 301 1 TBR TBR . D 2 TBR A 1 302 3 TBR TBR . E 2 TBR A 1 303 4 TBR TBR . F 2 TBR A 1 304 5 TBR TBR . G 2 TBR A 1 305 6 TBR TBR . H 2 TBR A 1 306 7 TBR TBR . I 2 TBR A 1 307 8 TBR TBR . J 3 BR A 1 308 1 BR BR . K 3 BR A 1 309 3 BR BR . L 3 BR A 1 310 4 BR BR . M 4 EDO A 1 311 1 EDO EDO . N 5 SO4 A 1 312 1 SO4 SO4 . O 6 ACT A 1 313 1 ACT ACT . P 2 TBR B 1 301 2 TBR TBR . Q 2 TBR B 1 302 9 TBR TBR . R 2 TBR B 1 303 10 TBR TBR . S 3 BR B 1 304 2 BR BR . T 3 BR B 1 305 5 BR BR . U 3 BR B 1 306 6 BR BR . V 5 SO4 B 1 307 2 SO4 SO4 . W 7 HOH A 1 401 21 HOH HOH . W 7 HOH A 2 402 1 HOH HOH . W 7 HOH A 3 403 16 HOH HOH . W 7 HOH A 4 404 2 HOH HOH . W 7 HOH A 5 405 4 HOH HOH . W 7 HOH A 6 406 6 HOH HOH . W 7 HOH A 7 407 14 HOH HOH . W 7 HOH A 8 408 20 HOH HOH . W 7 HOH A 9 409 5 HOH HOH . W 7 HOH A 10 410 8 HOH HOH . W 7 HOH A 11 411 15 HOH HOH . W 7 HOH A 12 412 3 HOH HOH . X 7 HOH B 1 401 18 HOH HOH . X 7 HOH B 2 402 9 HOH HOH . X 7 HOH B 3 403 10 HOH HOH . X 7 HOH B 4 404 12 HOH HOH . X 7 HOH B 5 405 19 HOH HOH . X 7 HOH B 6 406 11 HOH HOH . X 7 HOH B 7 407 7 HOH HOH . X 7 HOH B 8 408 13 HOH HOH . X 7 HOH B 9 409 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 4 2.085 30.675 15.486 1 45.76 ? C1 EDO 311 A 1 HETATM 2 O O1 EDO . . . M 4 0.78 31.261 15.397 1 53.89 ? O1 EDO 311 A 1 HETATM 3 C C2 EDO . . . M 4 2.912 31.26 14.325 1 52.34 ? C2 EDO 311 A 1 HETATM 4 O O2 EDO . . . M 4 4.336 31.214 14.476 1 46.69 ? O2 EDO 311 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #