data_6M9T # _model_server_result.job_id iTKqM97oh3_D2x5os1A2nA _model_server_result.datetime_utc '2024-10-18 16:32:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6m9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2101}' # _entry.id 6M9T # _exptl.entry_id 6M9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.508 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(11alpha,12alpha,13E,16S)-11,16-dihydroxy-16-methyl-9-oxoprost-13-en-1-oic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.83 _cell.angle_gamma 90 _cell.entry_id 6M9T _cell.length_a 120.8 _cell.length_b 54.85 _cell.length_c 96.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 142 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 130 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 220 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 208 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.027 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H36 O5' _chem_comp.formula_weight 368.508 _chem_comp.id J9P _chem_comp.mon_nstd_flag . _chem_comp.name '(11alpha,12alpha,13E,16S)-11,16-dihydroxy-16-methyl-9-oxoprost-13-en-1-oic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O26 C05 J9P sing 173 n n C06 C05 J9P sing 174 n n C05 C04 J9P sing 175 n n C05 C07 J9P sing 176 n n C04 C03 J9P sing 177 n n O25 C11 J9P sing 178 n n C07 C08 J9P sing 179 n n C02 C03 J9P sing 180 n n C02 C01 J9P sing 181 n n C08 C09 J9P doub 182 e n C11 C10 J9P sing 183 n n C11 C12 J9P sing 184 n n C09 C10 J9P sing 185 n n C10 C15 J9P sing 186 n n C12 C13 J9P sing 187 n n C15 C13 J9P sing 188 n n C15 C16 J9P sing 189 n n C13 O14 J9P doub 190 n n C16 C17 J9P sing 191 n n C17 C18 J9P sing 192 n n C18 C19 J9P sing 193 n n C19 C20 J9P sing 194 n n C20 C21 J9P sing 195 n n O24 C22 J9P doub 196 n n C21 C22 J9P sing 197 n n C22 O23 J9P sing 198 n n C01 H1 J9P sing 199 n n C01 H2 J9P sing 200 n n C01 H3 J9P sing 201 n n C02 H4 J9P sing 202 n n C02 H5 J9P sing 203 n n C03 H6 J9P sing 204 n n C03 H7 J9P sing 205 n n C04 H8 J9P sing 206 n n C04 H9 J9P sing 207 n n C06 H10 J9P sing 208 n n C06 H11 J9P sing 209 n n C06 H12 J9P sing 210 n n C07 H13 J9P sing 211 n n C07 H14 J9P sing 212 n n C08 H15 J9P sing 213 n n C09 H16 J9P sing 214 n n C10 H17 J9P sing 215 n n C11 H18 J9P sing 216 n n C12 H19 J9P sing 217 n n C12 H20 J9P sing 218 n n C15 H21 J9P sing 219 n n C16 H22 J9P sing 220 n n C16 H23 J9P sing 221 n n C17 H24 J9P sing 222 n n C17 H25 J9P sing 223 n n C18 H26 J9P sing 224 n n C18 H27 J9P sing 225 n n C19 H28 J9P sing 226 n n C19 H29 J9P sing 227 n n C20 H30 J9P sing 228 n n C20 H31 J9P sing 229 n n C21 H32 J9P sing 230 n n C21 H33 J9P sing 231 n n O23 H34 J9P sing 232 n n O25 H35 J9P sing 233 n n O26 H36 J9P sing 234 n n # _atom_sites.entry_id 6M9T _atom_sites.fract_transf_matrix[1][1] 0.008278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000845 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010384 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J9P A 1 2101 1 J9P MIS . C 3 SO4 A 1 2102 1 SO4 SO4 . D 3 SO4 A 1 2103 2 SO4 SO4 . E 3 SO4 A 1 2104 3 SO4 SO4 . F 3 SO4 A 1 2105 4 SO4 SO4 . G 4 OLC A 1 2106 1 OLC OLC . H 5 OLA A 1 2107 2 OLA OLA . I 5 OLA A 1 2108 3 OLA OLA . J 5 OLA A 1 2109 4 OLA OLA . K 5 OLA A 1 2110 5 OLA OLA . L 6 HOH A 1 2201 5 HOH HOH . L 6 HOH A 2 2202 1 HOH HOH . L 6 HOH A 3 2203 2 HOH HOH . L 6 HOH A 4 2204 4 HOH HOH . L 6 HOH A 5 2205 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 J9P . . . B 2 125.471 -11.713 153.693 1 79.89 ? C01 J9P 2101 A 1 HETATM 2 C C02 J9P . . . B 2 125.985 -11.098 152.4 1 81.54 ? C02 J9P 2101 A 1 HETATM 3 C C03 J9P . . . B 2 126.083 -9.576 152.453 1 83.17 ? C03 J9P 2101 A 1 HETATM 4 C C04 J9P . . . B 2 126.987 -9.075 151.32 1 84.74 ? C04 J9P 2101 A 1 HETATM 5 C C05 J9P . . . B 2 126.85 -7.623 150.827 1 86.06 ? C05 J9P 2101 A 1 HETATM 6 C C06 J9P . . . B 2 125.442 -7.371 150.307 1 85.95 ? C06 J9P 2101 A 1 HETATM 7 C C07 J9P . . . B 2 127.134 -6.541 151.88 1 87.54 ? C07 J9P 2101 A 1 HETATM 8 C C08 J9P . . . B 2 128.465 -6.717 152.613 1 89.65 ? C08 J9P 2101 A 1 HETATM 9 C C09 J9P . . . B 2 129.204 -5.656 152.853 1 91.43 ? C09 J9P 2101 A 1 HETATM 10 C C10 J9P . . . B 2 130.501 -5.766 153.576 1 91.6 ? C10 J9P 2101 A 1 HETATM 11 C C11 J9P . . . B 2 131.659 -4.895 152.739 1 91.86 ? C11 J9P 2101 A 1 HETATM 12 C C12 J9P . . . B 2 132.607 -4.536 153.685 1 93.67 ? C12 J9P 2101 A 1 HETATM 13 C C13 J9P . . . B 2 131.851 -4.551 155.066 1 94.5 ? C13 J9P 2101 A 1 HETATM 14 C C15 J9P . . . B 2 130.422 -5.107 154.822 1 93.56 ? C15 J9P 2101 A 1 HETATM 15 C C16 J9P . . . B 2 129.905 -6.024 155.987 1 93.62 ? C16 J9P 2101 A 1 HETATM 16 C C17 J9P . . . B 2 130.792 -7.234 156.286 1 94.68 ? C17 J9P 2101 A 1 HETATM 17 C C18 J9P . . . B 2 130.145 -8.236 157.242 1 96.4 ? C18 J9P 2101 A 1 HETATM 18 C C19 J9P . . . B 2 130.348 -7.882 158.715 1 97.49 ? C19 J9P 2101 A 1 HETATM 19 C C20 J9P . . . B 2 131.73 -8.225 159.263 1 99.28 ? C20 J9P 2101 A 1 HETATM 20 C C21 J9P . . . B 2 132.063 -7.351 160.469 1 102.29 ? C21 J9P 2101 A 1 HETATM 21 C C22 J9P . . . B 2 133.553 -7.294 160.814 1 105.28 ? C22 J9P 2101 A 1 HETATM 22 O O14 J9P . . . B 2 132.307 -4.199 156.109 1 94.35 ? O14 J9P 2101 A 1 HETATM 23 O O23 J9P . . . B 2 133.919 -7.46 162.009 1 105.72 ? O23 J9P 2101 A 1 HETATM 24 O O24 J9P . . . B 2 134.416 -7.066 159.922 1 107.18 -1 O24 J9P 2101 A 1 HETATM 25 O O25 J9P . . . B 2 132.233 -5.696 151.788 1 93.13 ? O25 J9P 2101 A 1 HETATM 26 O O26 J9P . . . B 2 127.735 -7.454 149.753 1 86.46 ? O26 J9P 2101 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #