data_6MA7
#
_model_server_result.job_id            R9ksl1PztpQqguvss-Dqng 
_model_server_result.datetime_utc      '2024-11-24 05:37:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ma7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":603}' 
#
_entry.id    6MA7 
#
_exptl.entry_id    6MA7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MA7 
_cell.length_a            76.378 
_cell.length_b            101.31 
_cell.length_c            127.319 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MA7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1,4 
A,B,C,D,E,F 2 1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -76.378 0 0 
3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -76.378 0 0 
4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N5 TPF . A TPF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6MA7 
_atom_sites.fract_transf_matrix[1][1]    0.013093 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009871 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007854 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 500 HEM HEM . 
C 3 TPF A 1 602 700 TPF FLU . 
D 4 DMS A 1 603 800 DMS DMS . 
E 5 EDO A 1 604 900 EDO EDO . 
F 6 HOH A 1 701 87 HOH HOH . 
F 6 HOH A 2 702 40 HOH HOH . 
F 6 HOH A 3 703 11 HOH HOH . 
F 6 HOH A 4 704 46 HOH HOH . 
F 6 HOH A 5 705 71 HOH HOH . 
F 6 HOH A 6 706 25 HOH HOH . 
F 6 HOH A 7 707 49 HOH HOH . 
F 6 HOH A 8 708 17 HOH HOH . 
F 6 HOH A 9 709 58 HOH HOH . 
F 6 HOH A 10 710 44 HOH HOH . 
F 6 HOH A 11 711 16 HOH HOH . 
F 6 HOH A 12 712 31 HOH HOH . 
F 6 HOH A 13 713 19 HOH HOH . 
F 6 HOH A 14 714 29 HOH HOH . 
F 6 HOH A 15 715 9 HOH HOH . 
F 6 HOH A 16 716 91 HOH HOH . 
F 6 HOH A 17 717 12 HOH HOH . 
F 6 HOH A 18 718 84 HOH HOH . 
F 6 HOH A 19 719 79 HOH HOH . 
F 6 HOH A 20 720 18 HOH HOH . 
F 6 HOH A 21 721 28 HOH HOH . 
F 6 HOH A 22 722 57 HOH HOH . 
F 6 HOH A 23 723 51 HOH HOH . 
F 6 HOH A 24 724 1 HOH HOH . 
F 6 HOH A 25 725 50 HOH HOH . 
F 6 HOH A 26 726 32 HOH HOH . 
F 6 HOH A 27 727 42 HOH HOH . 
F 6 HOH A 28 728 26 HOH HOH . 
F 6 HOH A 29 729 20 HOH HOH . 
F 6 HOH A 30 730 3 HOH HOH . 
F 6 HOH A 31 731 81 HOH HOH . 
F 6 HOH A 32 732 35 HOH HOH . 
F 6 HOH A 33 733 7 HOH HOH . 
F 6 HOH A 34 734 82 HOH HOH . 
F 6 HOH A 35 735 14 HOH HOH . 
F 6 HOH A 36 736 15 HOH HOH . 
F 6 HOH A 37 737 76 HOH HOH . 
F 6 HOH A 38 738 33 HOH HOH . 
F 6 HOH A 39 739 27 HOH HOH . 
F 6 HOH A 40 740 13 HOH HOH . 
F 6 HOH A 41 741 36 HOH HOH . 
F 6 HOH A 42 742 52 HOH HOH . 
F 6 HOH A 43 743 85 HOH HOH . 
F 6 HOH A 44 744 70 HOH HOH . 
F 6 HOH A 45 745 5 HOH HOH . 
F 6 HOH A 46 746 54 HOH HOH . 
F 6 HOH A 47 747 77 HOH HOH . 
F 6 HOH A 48 748 38 HOH HOH . 
F 6 HOH A 49 749 2 HOH HOH . 
F 6 HOH A 50 750 45 HOH HOH . 
F 6 HOH A 51 751 6 HOH HOH . 
F 6 HOH A 52 752 78 HOH HOH . 
F 6 HOH A 53 753 83 HOH HOH . 
F 6 HOH A 54 754 21 HOH HOH . 
F 6 HOH A 55 755 63 HOH HOH . 
F 6 HOH A 56 756 22 HOH HOH . 
F 6 HOH A 57 757 39 HOH HOH . 
F 6 HOH A 58 758 24 HOH HOH . 
F 6 HOH A 59 759 90 HOH HOH . 
F 6 HOH A 60 760 4 HOH HOH . 
F 6 HOH A 61 761 10 HOH HOH . 
F 6 HOH A 62 762 66 HOH HOH . 
F 6 HOH A 63 763 30 HOH HOH . 
F 6 HOH A 64 764 62 HOH HOH . 
F 6 HOH A 65 765 61 HOH HOH . 
F 6 HOH A 66 766 80 HOH HOH . 
F 6 HOH A 67 767 89 HOH HOH . 
F 6 HOH A 68 768 88 HOH HOH . 
F 6 HOH A 69 769 23 HOH HOH . 
F 6 HOH A 70 770 48 HOH HOH . 
F 6 HOH A 71 771 8 HOH HOH . 
F 6 HOH A 72 772 65 HOH HOH . 
F 6 HOH A 73 773 60 HOH HOH . 
F 6 HOH A 74 774 74 HOH HOH . 
F 6 HOH A 75 775 56 HOH HOH . 
F 6 HOH A 76 776 69 HOH HOH . 
F 6 HOH A 77 777 43 HOH HOH . 
F 6 HOH A 78 778 59 HOH HOH . 
F 6 HOH A 79 779 93 HOH HOH . 
F 6 HOH A 80 780 41 HOH HOH . 
F 6 HOH A 81 781 92 HOH HOH . 
F 6 HOH A 82 782 75 HOH HOH . 
F 6 HOH A 83 783 34 HOH HOH . 
F 6 HOH A 84 784 47 HOH HOH . 
F 6 HOH A 85 785 64 HOH HOH . 
F 6 HOH A 86 786 55 HOH HOH . 
F 6 HOH A 87 787 72 HOH HOH . 
F 6 HOH A 88 788 73 HOH HOH . 
F 6 HOH A 89 789 68 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 4 -21.935 -17.019 -5.774 0.84 62.29 ? S DMS 603 A 1 
HETATM 2 O O DMS . . . D 4 -21.098 -18.243 -5.821 0.84 59.44 ? O DMS 603 A 1 
HETATM 3 C C1 DMS . . . D 4 -20.921 -15.559 -6.171 0.84 64.87 ? C1 DMS 603 A 1 
HETATM 4 C C2 DMS . . . D 4 -22.999 -16.965 -7.245 0.84 61.75 ? C2 DMS 603 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#