data_6MAJ
#
_model_server_result.job_id            hCgPeYnq8tuklt12zxwrdQ 
_model_server_result.datetime_utc      '2024-11-14 20:37:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6maj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":702}' 
#
_entry.id    6MAJ 
#
_exptl.entry_id    6MAJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6MAJ 
_cell.length_a            111.543 
_cell.length_b            111.543 
_cell.length_c            73.702 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MAJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 36 A CYS 368 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc2 A SG CYS 39 A CYS 371 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc3 A NE2 HIS 52 A HIS 384 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc4 A SG CYS 56 A CYS 388 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
covale ? covale1 A C HIS 99 A HIS 431 1_555 A N ALY 100 A ALY 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C ALY 100 A ALY 432 1_555 A N THR 101 A THR 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
_atom_sites.entry_id                     6MAJ 
_atom_sites.fract_transf_matrix[1][1]    0.008965 
_atom_sites.fract_transf_matrix[1][2]    0.005176 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010352 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013568 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 701 701 ZN ZN . 
D 4 GOL A 1 702 1 GOL GLC . 
E 4 GOL A 1 703 2 GOL GLC . 
F 5 JAV A 1 704 1 JAV CTX . 
G 6 HOH A 1 801 64 HOH HOH . 
G 6 HOH A 2 802 33 HOH HOH . 
G 6 HOH A 3 803 39 HOH HOH . 
G 6 HOH A 4 804 148 HOH HOH . 
G 6 HOH A 5 805 100 HOH HOH . 
G 6 HOH A 6 806 88 HOH HOH . 
G 6 HOH A 7 807 85 HOH HOH . 
G 6 HOH A 8 808 25 HOH HOH . 
G 6 HOH A 9 809 44 HOH HOH . 
G 6 HOH A 10 810 52 HOH HOH . 
G 6 HOH A 11 811 1 HOH HOH . 
G 6 HOH A 12 812 34 HOH HOH . 
G 6 HOH A 13 813 35 HOH HOH . 
G 6 HOH A 14 814 31 HOH HOH . 
G 6 HOH A 15 815 87 HOH HOH . 
G 6 HOH A 16 816 89 HOH HOH . 
G 6 HOH A 17 817 23 HOH HOH . 
G 6 HOH A 18 818 55 HOH HOH . 
G 6 HOH A 19 819 62 HOH HOH . 
G 6 HOH A 20 820 38 HOH HOH . 
G 6 HOH A 21 821 138 HOH HOH . 
G 6 HOH A 22 822 77 HOH HOH . 
G 6 HOH A 23 823 65 HOH HOH . 
G 6 HOH A 24 824 3 HOH HOH . 
G 6 HOH A 25 825 90 HOH HOH . 
G 6 HOH A 26 826 107 HOH HOH . 
G 6 HOH A 27 827 95 HOH HOH . 
G 6 HOH A 28 828 16 HOH HOH . 
G 6 HOH A 29 829 26 HOH HOH . 
G 6 HOH A 30 830 147 HOH HOH . 
G 6 HOH A 31 831 93 HOH HOH . 
G 6 HOH A 32 832 86 HOH HOH . 
G 6 HOH A 33 833 67 HOH HOH . 
G 6 HOH A 34 834 78 HOH HOH . 
G 6 HOH A 35 835 20 HOH HOH . 
G 6 HOH A 36 836 2 HOH HOH . 
G 6 HOH A 37 837 21 HOH HOH . 
G 6 HOH A 38 838 153 HOH HOH . 
G 6 HOH A 39 839 121 HOH HOH . 
G 6 HOH A 40 840 30 HOH HOH . 
G 6 HOH A 41 841 15 HOH HOH . 
G 6 HOH A 42 842 32 HOH HOH . 
G 6 HOH A 43 843 99 HOH HOH . 
G 6 HOH A 44 844 8 HOH HOH . 
G 6 HOH A 45 845 6 HOH HOH . 
G 6 HOH A 46 846 46 HOH HOH . 
G 6 HOH A 47 847 28 HOH HOH . 
G 6 HOH A 48 848 82 HOH HOH . 
G 6 HOH A 49 849 19 HOH HOH . 
G 6 HOH A 50 850 47 HOH HOH . 
G 6 HOH A 51 851 37 HOH HOH . 
G 6 HOH A 52 852 66 HOH HOH . 
G 6 HOH A 53 853 73 HOH HOH . 
G 6 HOH A 54 854 27 HOH HOH . 
G 6 HOH A 55 855 133 HOH HOH . 
G 6 HOH A 56 856 22 HOH HOH . 
G 6 HOH A 57 857 84 HOH HOH . 
G 6 HOH A 58 858 105 HOH HOH . 
G 6 HOH A 59 859 60 HOH HOH . 
G 6 HOH A 60 860 9 HOH HOH . 
G 6 HOH A 61 861 12 HOH HOH . 
G 6 HOH A 62 862 10 HOH HOH . 
G 6 HOH A 63 863 24 HOH HOH . 
G 6 HOH A 64 864 79 HOH HOH . 
G 6 HOH A 65 865 57 HOH HOH . 
G 6 HOH A 66 866 125 HOH HOH . 
G 6 HOH A 67 867 150 HOH HOH . 
G 6 HOH A 68 868 13 HOH HOH . 
G 6 HOH A 69 869 146 HOH HOH . 
G 6 HOH A 70 870 75 HOH HOH . 
G 6 HOH A 71 871 102 HOH HOH . 
G 6 HOH A 72 872 144 HOH HOH . 
G 6 HOH A 73 873 54 HOH HOH . 
G 6 HOH A 74 874 11 HOH HOH . 
G 6 HOH A 75 875 132 HOH HOH . 
G 6 HOH A 76 876 50 HOH HOH . 
G 6 HOH A 77 877 92 HOH HOH . 
G 6 HOH A 78 878 29 HOH HOH . 
G 6 HOH A 79 879 134 HOH HOH . 
G 6 HOH A 80 880 71 HOH HOH . 
G 6 HOH A 81 881 130 HOH HOH . 
G 6 HOH A 82 882 104 HOH HOH . 
G 6 HOH A 83 883 42 HOH HOH . 
G 6 HOH A 84 884 49 HOH HOH . 
G 6 HOH A 85 885 106 HOH HOH . 
G 6 HOH A 86 886 40 HOH HOH . 
G 6 HOH A 87 887 156 HOH HOH . 
G 6 HOH A 88 888 141 HOH HOH . 
G 6 HOH A 89 889 139 HOH HOH . 
G 6 HOH A 90 890 76 HOH HOH . 
G 6 HOH A 91 891 58 HOH HOH . 
G 6 HOH A 92 892 114 HOH HOH . 
G 6 HOH A 93 893 136 HOH HOH . 
G 6 HOH A 94 894 14 HOH HOH . 
G 6 HOH A 95 895 124 HOH HOH . 
G 6 HOH A 96 896 72 HOH HOH . 
G 6 HOH A 97 897 98 HOH HOH . 
G 6 HOH A 98 898 111 HOH HOH . 
G 6 HOH A 99 899 45 HOH HOH . 
G 6 HOH A 100 900 117 HOH HOH . 
G 6 HOH A 101 901 97 HOH HOH . 
G 6 HOH A 102 902 128 HOH HOH . 
G 6 HOH A 103 903 101 HOH HOH . 
G 6 HOH A 104 904 43 HOH HOH . 
G 6 HOH A 105 905 7 HOH HOH . 
G 6 HOH A 106 906 131 HOH HOH . 
G 6 HOH A 107 907 53 HOH HOH . 
G 6 HOH A 108 908 70 HOH HOH . 
G 6 HOH A 109 909 126 HOH HOH . 
G 6 HOH A 110 910 56 HOH HOH . 
G 6 HOH A 111 911 103 HOH HOH . 
G 6 HOH A 112 912 135 HOH HOH . 
G 6 HOH A 113 913 17 HOH HOH . 
G 6 HOH A 114 914 110 HOH HOH . 
G 6 HOH A 115 915 91 HOH HOH . 
G 6 HOH A 116 916 94 HOH HOH . 
G 6 HOH A 117 917 140 HOH HOH . 
G 6 HOH A 118 918 4 HOH HOH . 
G 6 HOH A 119 919 63 HOH HOH . 
G 6 HOH A 120 920 5 HOH HOH . 
G 6 HOH A 121 921 157 HOH HOH . 
G 6 HOH A 122 922 142 HOH HOH . 
G 6 HOH A 123 923 123 HOH HOH . 
G 6 HOH A 124 924 143 HOH HOH . 
G 6 HOH A 125 925 68 HOH HOH . 
G 6 HOH A 126 926 116 HOH HOH . 
G 6 HOH A 127 927 137 HOH HOH . 
G 6 HOH A 128 928 108 HOH HOH . 
G 6 HOH A 129 929 61 HOH HOH . 
G 6 HOH A 130 930 109 HOH HOH . 
G 6 HOH A 131 931 145 HOH HOH . 
G 6 HOH A 132 932 122 HOH HOH . 
G 6 HOH A 133 933 69 HOH HOH . 
G 6 HOH A 134 934 151 HOH HOH . 
G 6 HOH A 135 935 119 HOH HOH . 
G 6 HOH A 136 936 113 HOH HOH . 
G 6 HOH A 137 937 59 HOH HOH . 
G 6 HOH A 138 938 152 HOH HOH . 
G 6 HOH A 139 939 127 HOH HOH . 
G 6 HOH A 140 940 36 HOH HOH . 
G 6 HOH A 141 941 154 HOH HOH . 
G 6 HOH A 142 942 80 HOH HOH . 
G 6 HOH A 143 943 115 HOH HOH . 
G 6 HOH A 144 944 129 HOH HOH . 
G 6 HOH A 145 945 74 HOH HOH . 
G 6 HOH A 146 946 120 HOH HOH . 
G 6 HOH A 147 947 118 HOH HOH . 
G 6 HOH A 148 948 48 HOH HOH . 
G 6 HOH A 149 949 112 HOH HOH . 
G 6 HOH A 150 950 81 HOH HOH . 
G 6 HOH A 151 951 149 HOH HOH . 
H 6 HOH B 1 101 51 HOH HOH . 
H 6 HOH B 2 102 18 HOH HOH . 
H 6 HOH B 3 103 41 HOH HOH . 
H 6 HOH B 4 104 155 HOH HOH . 
H 6 HOH B 5 105 83 HOH HOH . 
H 6 HOH B 6 106 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 28.695 189.761 -67.635 1 63.59 ? C1 GOL 702 A 1 
HETATM 2 O O1 GOL . . . D 4 28.5 191.12 -67.761 1 59.93 ? O1 GOL 702 A 1 
HETATM 3 C C2 GOL . . . D 4 29.931 189.461 -66.884 1 66.36 ? C2 GOL 702 A 1 
HETATM 4 O O2 GOL . . . D 4 29.979 190.098 -65.641 1 67.33 ? O2 GOL 702 A 1 
HETATM 5 C C3 GOL . . . D 4 29.962 188.018 -66.558 1 68.29 ? C3 GOL 702 A 1 
HETATM 6 O O3 GOL . . . D 4 28.804 187.754 -65.853 1 69.99 ? O3 GOL 702 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#