data_6MAJ # _model_server_result.job_id 8hghM1weXSRmZI8N6jQvog _model_server_result.datetime_utc '2024-11-28 14:11:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6maj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":704}' # _entry.id 6MAJ # _exptl.entry_id 6MAJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 400.423 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description "4-fluoro-N'-[(3-hydroxyphenyl)sulfonyl]-5-methyl[1,1'-biphenyl]-3-carbohydrazide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MAJ _cell.length_a 111.543 _cell.length_b 111.543 _cell.length_c 73.702 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MAJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 99 A HIS 431 1_555 A N ALY 100 A ALY 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C ALY 100 A ALY 432 1_555 A N THR 101 A THR 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A SG CYS 36 A CYS 368 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc2 A SG CYS 39 A CYS 371 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 A NE2 HIS 52 A HIS 384 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc4 A SG CYS 56 A CYS 388 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? # _chem_comp.formula 'C20 H17 F N2 O4 S' _chem_comp.formula_weight 400.423 _chem_comp.id JAV _chem_comp.mon_nstd_flag . _chem_comp.name "4-fluoro-N'-[(3-hydroxyphenyl)sulfonyl]-5-methyl[1,1'-biphenyl]-3-carbohydrazide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C26 JAV doub 214 n y C25 C24 JAV sing 215 n y C26 C27 JAV sing 216 n y C24 C23 JAV doub 217 n y C27 C28 JAV doub 218 n y C01 C02 JAV sing 219 n n C23 C28 JAV sing 220 n y C23 C04 JAV sing 221 n n C03 C04 JAV doub 222 n y C03 C02 JAV sing 223 n y C04 C05 JAV sing 224 n y C02 C07 JAV doub 225 n y C05 C06 JAV doub 226 n y C07 C06 JAV sing 227 n y C07 F08 JAV sing 228 n n C06 C09 JAV sing 229 n n C09 O10 JAV doub 230 n n C09 N11 JAV sing 231 n n N11 N12 JAV sing 232 n n O14 S13 JAV doub 233 n n C17 C18 JAV doub 234 n y C17 C16 JAV sing 235 n y C18 C19 JAV sing 236 n y N12 S13 JAV sing 237 n n S13 C16 JAV sing 238 n n S13 O15 JAV doub 239 n n C16 C21 JAV doub 240 n y C19 C20 JAV doub 241 n y C21 C20 JAV sing 242 n y C20 O22 JAV sing 243 n n C17 H1 JAV sing 244 n n C18 H2 JAV sing 245 n n C19 H3 JAV sing 246 n n C21 H4 JAV sing 247 n n C01 H5 JAV sing 248 n n C01 H6 JAV sing 249 n n C01 H7 JAV sing 250 n n C03 H8 JAV sing 251 n n C05 H9 JAV sing 252 n n C24 H10 JAV sing 253 n n C25 H11 JAV sing 254 n n C26 H12 JAV sing 255 n n C27 H13 JAV sing 256 n n C28 H14 JAV sing 257 n n N11 H15 JAV sing 258 n n N12 H16 JAV sing 259 n n O22 H17 JAV sing 260 n n # _atom_sites.entry_id 6MAJ _atom_sites.fract_transf_matrix[1][1] 0.008965 _atom_sites.fract_transf_matrix[1][2] 0.005176 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010352 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 701 701 ZN ZN . D 4 GOL A 1 702 1 GOL GLC . E 4 GOL A 1 703 2 GOL GLC . F 5 JAV A 1 704 1 JAV CTX . G 6 HOH A 1 801 64 HOH HOH . G 6 HOH A 2 802 33 HOH HOH . G 6 HOH A 3 803 39 HOH HOH . G 6 HOH A 4 804 148 HOH HOH . G 6 HOH A 5 805 100 HOH HOH . G 6 HOH A 6 806 88 HOH HOH . G 6 HOH A 7 807 85 HOH HOH . G 6 HOH A 8 808 25 HOH HOH . G 6 HOH A 9 809 44 HOH HOH . G 6 HOH A 10 810 52 HOH HOH . G 6 HOH A 11 811 1 HOH HOH . G 6 HOH A 12 812 34 HOH HOH . G 6 HOH A 13 813 35 HOH HOH . G 6 HOH A 14 814 31 HOH HOH . G 6 HOH A 15 815 87 HOH HOH . G 6 HOH A 16 816 89 HOH HOH . G 6 HOH A 17 817 23 HOH HOH . G 6 HOH A 18 818 55 HOH HOH . G 6 HOH A 19 819 62 HOH HOH . G 6 HOH A 20 820 38 HOH HOH . G 6 HOH A 21 821 138 HOH HOH . G 6 HOH A 22 822 77 HOH HOH . G 6 HOH A 23 823 65 HOH HOH . G 6 HOH A 24 824 3 HOH HOH . G 6 HOH A 25 825 90 HOH HOH . G 6 HOH A 26 826 107 HOH HOH . G 6 HOH A 27 827 95 HOH HOH . G 6 HOH A 28 828 16 HOH HOH . G 6 HOH A 29 829 26 HOH HOH . G 6 HOH A 30 830 147 HOH HOH . G 6 HOH A 31 831 93 HOH HOH . G 6 HOH A 32 832 86 HOH HOH . G 6 HOH A 33 833 67 HOH HOH . G 6 HOH A 34 834 78 HOH HOH . G 6 HOH A 35 835 20 HOH HOH . G 6 HOH A 36 836 2 HOH HOH . G 6 HOH A 37 837 21 HOH HOH . G 6 HOH A 38 838 153 HOH HOH . G 6 HOH A 39 839 121 HOH HOH . G 6 HOH A 40 840 30 HOH HOH . G 6 HOH A 41 841 15 HOH HOH . G 6 HOH A 42 842 32 HOH HOH . G 6 HOH A 43 843 99 HOH HOH . G 6 HOH A 44 844 8 HOH HOH . G 6 HOH A 45 845 6 HOH HOH . G 6 HOH A 46 846 46 HOH HOH . G 6 HOH A 47 847 28 HOH HOH . G 6 HOH A 48 848 82 HOH HOH . G 6 HOH A 49 849 19 HOH HOH . G 6 HOH A 50 850 47 HOH HOH . G 6 HOH A 51 851 37 HOH HOH . G 6 HOH A 52 852 66 HOH HOH . G 6 HOH A 53 853 73 HOH HOH . G 6 HOH A 54 854 27 HOH HOH . G 6 HOH A 55 855 133 HOH HOH . G 6 HOH A 56 856 22 HOH HOH . G 6 HOH A 57 857 84 HOH HOH . G 6 HOH A 58 858 105 HOH HOH . G 6 HOH A 59 859 60 HOH HOH . G 6 HOH A 60 860 9 HOH HOH . G 6 HOH A 61 861 12 HOH HOH . G 6 HOH A 62 862 10 HOH HOH . G 6 HOH A 63 863 24 HOH HOH . G 6 HOH A 64 864 79 HOH HOH . G 6 HOH A 65 865 57 HOH HOH . G 6 HOH A 66 866 125 HOH HOH . G 6 HOH A 67 867 150 HOH HOH . G 6 HOH A 68 868 13 HOH HOH . G 6 HOH A 69 869 146 HOH HOH . G 6 HOH A 70 870 75 HOH HOH . G 6 HOH A 71 871 102 HOH HOH . G 6 HOH A 72 872 144 HOH HOH . G 6 HOH A 73 873 54 HOH HOH . G 6 HOH A 74 874 11 HOH HOH . G 6 HOH A 75 875 132 HOH HOH . G 6 HOH A 76 876 50 HOH HOH . G 6 HOH A 77 877 92 HOH HOH . G 6 HOH A 78 878 29 HOH HOH . G 6 HOH A 79 879 134 HOH HOH . G 6 HOH A 80 880 71 HOH HOH . G 6 HOH A 81 881 130 HOH HOH . G 6 HOH A 82 882 104 HOH HOH . G 6 HOH A 83 883 42 HOH HOH . G 6 HOH A 84 884 49 HOH HOH . G 6 HOH A 85 885 106 HOH HOH . G 6 HOH A 86 886 40 HOH HOH . G 6 HOH A 87 887 156 HOH HOH . G 6 HOH A 88 888 141 HOH HOH . G 6 HOH A 89 889 139 HOH HOH . G 6 HOH A 90 890 76 HOH HOH . G 6 HOH A 91 891 58 HOH HOH . G 6 HOH A 92 892 114 HOH HOH . G 6 HOH A 93 893 136 HOH HOH . G 6 HOH A 94 894 14 HOH HOH . G 6 HOH A 95 895 124 HOH HOH . G 6 HOH A 96 896 72 HOH HOH . G 6 HOH A 97 897 98 HOH HOH . G 6 HOH A 98 898 111 HOH HOH . G 6 HOH A 99 899 45 HOH HOH . G 6 HOH A 100 900 117 HOH HOH . G 6 HOH A 101 901 97 HOH HOH . G 6 HOH A 102 902 128 HOH HOH . G 6 HOH A 103 903 101 HOH HOH . G 6 HOH A 104 904 43 HOH HOH . G 6 HOH A 105 905 7 HOH HOH . G 6 HOH A 106 906 131 HOH HOH . G 6 HOH A 107 907 53 HOH HOH . G 6 HOH A 108 908 70 HOH HOH . G 6 HOH A 109 909 126 HOH HOH . G 6 HOH A 110 910 56 HOH HOH . G 6 HOH A 111 911 103 HOH HOH . G 6 HOH A 112 912 135 HOH HOH . G 6 HOH A 113 913 17 HOH HOH . G 6 HOH A 114 914 110 HOH HOH . G 6 HOH A 115 915 91 HOH HOH . G 6 HOH A 116 916 94 HOH HOH . G 6 HOH A 117 917 140 HOH HOH . G 6 HOH A 118 918 4 HOH HOH . G 6 HOH A 119 919 63 HOH HOH . G 6 HOH A 120 920 5 HOH HOH . G 6 HOH A 121 921 157 HOH HOH . G 6 HOH A 122 922 142 HOH HOH . G 6 HOH A 123 923 123 HOH HOH . G 6 HOH A 124 924 143 HOH HOH . G 6 HOH A 125 925 68 HOH HOH . G 6 HOH A 126 926 116 HOH HOH . G 6 HOH A 127 927 137 HOH HOH . G 6 HOH A 128 928 108 HOH HOH . G 6 HOH A 129 929 61 HOH HOH . G 6 HOH A 130 930 109 HOH HOH . G 6 HOH A 131 931 145 HOH HOH . G 6 HOH A 132 932 122 HOH HOH . G 6 HOH A 133 933 69 HOH HOH . G 6 HOH A 134 934 151 HOH HOH . G 6 HOH A 135 935 119 HOH HOH . G 6 HOH A 136 936 113 HOH HOH . G 6 HOH A 137 937 59 HOH HOH . G 6 HOH A 138 938 152 HOH HOH . G 6 HOH A 139 939 127 HOH HOH . G 6 HOH A 140 940 36 HOH HOH . G 6 HOH A 141 941 154 HOH HOH . G 6 HOH A 142 942 80 HOH HOH . G 6 HOH A 143 943 115 HOH HOH . G 6 HOH A 144 944 129 HOH HOH . G 6 HOH A 145 945 74 HOH HOH . G 6 HOH A 146 946 120 HOH HOH . G 6 HOH A 147 947 118 HOH HOH . G 6 HOH A 148 948 48 HOH HOH . G 6 HOH A 149 949 112 HOH HOH . G 6 HOH A 150 950 81 HOH HOH . G 6 HOH A 151 951 149 HOH HOH . H 6 HOH B 1 101 51 HOH HOH . H 6 HOH B 2 102 18 HOH HOH . H 6 HOH B 3 103 41 HOH HOH . H 6 HOH B 4 104 155 HOH HOH . H 6 HOH B 5 105 83 HOH HOH . H 6 HOH B 6 106 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C16 JAV . . . F 5 26.09 187.967 -69.191 0.88 25.83 ? C16 JAV 704 A 1 HETATM 2 C C17 JAV . . . F 5 26.704 187.246 -70.171 0.88 21.61 ? C17 JAV 704 A 1 HETATM 3 C C18 JAV . . . F 5 27.124 185.967 -69.903 0.88 23.15 ? C18 JAV 704 A 1 HETATM 4 C C19 JAV . . . F 5 26.918 185.423 -68.648 0.88 24.02 ? C19 JAV 704 A 1 HETATM 5 C C20 JAV . . . F 5 26.302 186.152 -67.674 0.88 28.18 ? C20 JAV 704 A 1 HETATM 6 C C21 JAV . . . F 5 25.881 187.424 -67.94 0.88 28 ? C21 JAV 704 A 1 HETATM 7 C C01 JAV . . . F 5 29.352 188.51 -75.763 0.88 15.95 ? C01 JAV 704 A 1 HETATM 8 C C02 JAV . . . F 5 29.06 189.948 -75.134 0.88 16.86 ? C02 JAV 704 A 1 HETATM 9 C C03 JAV . . . F 5 29.593 191.058 -75.701 0.88 14.04 ? C03 JAV 704 A 1 HETATM 10 C C04 JAV . . . F 5 29.338 192.289 -75.161 0.88 13.4 ? C04 JAV 704 A 1 HETATM 11 C C05 JAV . . . F 5 28.56 192.397 -74.062 0.88 14.76 ? C05 JAV 704 A 1 HETATM 12 C C06 JAV . . . F 5 28.036 191.31 -73.506 0.88 16.4 ? C06 JAV 704 A 1 HETATM 13 C C07 JAV . . . F 5 28.29 190.059 -74.046 0.88 20.11 ? C07 JAV 704 A 1 HETATM 14 C C09 JAV . . . F 5 27.126 191.437 -72.191 0.88 19.01 ? C09 JAV 704 A 1 HETATM 15 C C23 JAV . . . F 5 29.907 193.5 -75.746 0.88 12.13 ? C23 JAV 704 A 1 HETATM 16 C C24 JAV . . . F 5 31.178 193.456 -76.313 0.88 9.91 ? C24 JAV 704 A 1 HETATM 17 C C25 JAV . . . F 5 31.74 194.609 -76.863 0.88 12.87 ? C25 JAV 704 A 1 HETATM 18 C C26 JAV . . . F 5 31.018 195.828 -76.839 0.88 12.71 ? C26 JAV 704 A 1 HETATM 19 C C27 JAV . . . F 5 29.768 195.872 -76.27 0.88 13.56 ? C27 JAV 704 A 1 HETATM 20 C C28 JAV . . . F 5 29.198 194.694 -75.712 0.88 14.19 ? C28 JAV 704 A 1 HETATM 21 F F08 JAV . . . F 5 27.735 188.933 -73.458 0.88 20.83 ? F08 JAV 704 A 1 HETATM 22 N N11 JAV . . . F 5 27.561 190.682 -71 0.88 21.69 ? N11 JAV 704 A 1 HETATM 23 N N12 JAV . . . F 5 26.805 190.735 -69.755 0.88 26.14 ? N12 JAV 704 A 1 HETATM 24 O O10 JAV . . . F 5 26.155 192.126 -72.168 0.88 20.3 ? O10 JAV 704 A 1 HETATM 25 O O14 JAV . . . F 5 24.618 189.677 -70.649 0.88 27.38 ? O14 JAV 704 A 1 HETATM 26 O O15 JAV . . . F 5 24.638 190.184 -68.452 0.88 26.47 ? O15 JAV 704 A 1 HETATM 27 O O22 JAV . . . F 5 26.085 185.592 -66.369 0.88 29.47 ? O22 JAV 704 A 1 HETATM 28 S S13 JAV . . . F 5 25.506 189.686 -69.523 0.88 27.14 ? S13 JAV 704 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #