data_6MAN # _model_server_result.job_id Ig2ZD35wNzPvHbvmNDuRFA _model_server_result.datetime_utc '2025-04-20 00:53:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6man # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6MAN # _exptl.entry_id 6MAN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.87 _cell.angle_gamma 90 _cell.entry_id 6MAN _cell.length_a 58.88 _cell.length_b 81.74 _cell.length_c 89.18 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MAN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6MAN _atom_sites.fract_transf_matrix[1][1] 0.016984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000852 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012234 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011227 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 401 1 EDO EDO . D 3 SCN B 1 401 1 SCN SCN . E 4 HOH A 1 501 73 HOH HOH . E 4 HOH A 2 502 7 HOH HOH . E 4 HOH A 3 503 86 HOH HOH . E 4 HOH A 4 504 72 HOH HOH . E 4 HOH A 5 505 92 HOH HOH . E 4 HOH A 6 506 12 HOH HOH . E 4 HOH A 7 507 65 HOH HOH . E 4 HOH A 8 508 54 HOH HOH . E 4 HOH A 9 509 50 HOH HOH . E 4 HOH A 10 510 59 HOH HOH . E 4 HOH A 11 511 53 HOH HOH . E 4 HOH A 12 512 48 HOH HOH . E 4 HOH A 13 513 36 HOH HOH . E 4 HOH A 14 514 79 HOH HOH . E 4 HOH A 15 515 44 HOH HOH . E 4 HOH A 16 516 118 HOH HOH . E 4 HOH A 17 517 112 HOH HOH . E 4 HOH A 18 518 40 HOH HOH . E 4 HOH A 19 519 28 HOH HOH . E 4 HOH A 20 520 55 HOH HOH . E 4 HOH A 21 521 109 HOH HOH . E 4 HOH A 22 522 49 HOH HOH . E 4 HOH A 23 523 91 HOH HOH . E 4 HOH A 24 524 22 HOH HOH . E 4 HOH A 25 525 124 HOH HOH . E 4 HOH A 26 526 13 HOH HOH . E 4 HOH A 27 527 82 HOH HOH . E 4 HOH A 28 528 1 HOH HOH . E 4 HOH A 29 529 61 HOH HOH . E 4 HOH A 30 530 17 HOH HOH . E 4 HOH A 31 531 9 HOH HOH . E 4 HOH A 32 532 31 HOH HOH . E 4 HOH A 33 533 67 HOH HOH . E 4 HOH A 34 534 43 HOH HOH . E 4 HOH A 35 535 81 HOH HOH . E 4 HOH A 36 536 70 HOH HOH . E 4 HOH A 37 537 74 HOH HOH . E 4 HOH A 38 538 29 HOH HOH . E 4 HOH A 39 539 34 HOH HOH . E 4 HOH A 40 540 14 HOH HOH . E 4 HOH A 41 541 87 HOH HOH . E 4 HOH A 42 542 27 HOH HOH . E 4 HOH A 43 543 80 HOH HOH . E 4 HOH A 44 544 37 HOH HOH . E 4 HOH A 45 545 111 HOH HOH . E 4 HOH A 46 546 33 HOH HOH . E 4 HOH A 47 547 90 HOH HOH . E 4 HOH A 48 548 6 HOH HOH . E 4 HOH A 49 549 38 HOH HOH . E 4 HOH A 50 550 88 HOH HOH . E 4 HOH A 51 551 11 HOH HOH . E 4 HOH A 52 552 56 HOH HOH . E 4 HOH A 53 553 71 HOH HOH . E 4 HOH A 54 554 66 HOH HOH . E 4 HOH A 55 555 94 HOH HOH . E 4 HOH A 56 556 2 HOH HOH . E 4 HOH A 57 557 58 HOH HOH . E 4 HOH A 58 558 19 HOH HOH . E 4 HOH A 59 559 60 HOH HOH . E 4 HOH A 60 560 32 HOH HOH . E 4 HOH A 61 561 89 HOH HOH . E 4 HOH A 62 562 115 HOH HOH . E 4 HOH A 63 563 117 HOH HOH . E 4 HOH A 64 564 114 HOH HOH . E 4 HOH A 65 565 3 HOH HOH . E 4 HOH A 66 566 45 HOH HOH . E 4 HOH A 67 567 93 HOH HOH . E 4 HOH A 68 568 41 HOH HOH . E 4 HOH A 69 569 119 HOH HOH . E 4 HOH A 70 570 78 HOH HOH . E 4 HOH A 71 571 4 HOH HOH . E 4 HOH A 72 572 110 HOH HOH . E 4 HOH A 73 573 77 HOH HOH . E 4 HOH A 74 574 84 HOH HOH . E 4 HOH A 75 575 51 HOH HOH . E 4 HOH A 76 576 116 HOH HOH . E 4 HOH A 77 577 113 HOH HOH . E 4 HOH A 78 578 18 HOH HOH . E 4 HOH A 79 579 52 HOH HOH . E 4 HOH A 80 580 76 HOH HOH . E 4 HOH A 81 581 69 HOH HOH . E 4 HOH A 82 582 85 HOH HOH . F 4 HOH B 1 501 20 HOH HOH . F 4 HOH B 2 502 108 HOH HOH . F 4 HOH B 3 503 24 HOH HOH . F 4 HOH B 4 504 64 HOH HOH . F 4 HOH B 5 505 75 HOH HOH . F 4 HOH B 6 506 103 HOH HOH . F 4 HOH B 7 507 26 HOH HOH . F 4 HOH B 8 508 99 HOH HOH . F 4 HOH B 9 509 96 HOH HOH . F 4 HOH B 10 510 100 HOH HOH . F 4 HOH B 11 511 23 HOH HOH . F 4 HOH B 12 512 21 HOH HOH . F 4 HOH B 13 513 102 HOH HOH . F 4 HOH B 14 514 46 HOH HOH . F 4 HOH B 15 515 8 HOH HOH . F 4 HOH B 16 516 98 HOH HOH . F 4 HOH B 17 517 95 HOH HOH . F 4 HOH B 18 518 122 HOH HOH . F 4 HOH B 19 519 68 HOH HOH . F 4 HOH B 20 520 16 HOH HOH . F 4 HOH B 21 521 15 HOH HOH . F 4 HOH B 22 522 25 HOH HOH . F 4 HOH B 23 523 57 HOH HOH . F 4 HOH B 24 524 42 HOH HOH . F 4 HOH B 25 525 106 HOH HOH . F 4 HOH B 26 526 107 HOH HOH . F 4 HOH B 27 527 101 HOH HOH . F 4 HOH B 28 528 5 HOH HOH . F 4 HOH B 29 529 97 HOH HOH . F 4 HOH B 30 530 62 HOH HOH . F 4 HOH B 31 531 120 HOH HOH . F 4 HOH B 32 532 105 HOH HOH . F 4 HOH B 33 533 39 HOH HOH . F 4 HOH B 34 534 63 HOH HOH . F 4 HOH B 35 535 104 HOH HOH . F 4 HOH B 36 536 121 HOH HOH . F 4 HOH B 37 537 35 HOH HOH . F 4 HOH B 38 538 30 HOH HOH . F 4 HOH B 39 539 10 HOH HOH . F 4 HOH B 40 540 83 HOH HOH . F 4 HOH B 41 541 123 HOH HOH . F 4 HOH B 42 542 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . A . C 2 4.819 -31.774 -20.134 0.5 67.91 ? C1 EDO 401 A 1 HETATM 2 C C1 EDO . B . C 2 4.536 -31.646 -19.342 0.5 66.71 ? C1 EDO 401 A 1 HETATM 3 O O1 EDO . A . C 2 3.907 -31.013 -19.333 0.5 64.9 ? O1 EDO 401 A 1 HETATM 4 O O1 EDO . B . C 2 4.627 -33.078 -19.333 0.5 66.75 ? O1 EDO 401 A 1 HETATM 5 C C2 EDO . A . C 2 4.468 -31.59 -21.607 0.5 70.36 ? C2 EDO 401 A 1 HETATM 6 C C2 EDO . B . C 2 3.979 -31.171 -20.68 0.5 67.87 ? C2 EDO 401 A 1 HETATM 7 O O2 EDO . A . C 2 5.661 -31.672 -22.397 0.5 73.44 ? O2 EDO 401 A 1 HETATM 8 O O2 EDO . B . C 2 4.746 -31.73 -21.754 0.5 70.12 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #