data_6MAT
#
_model_server_result.job_id            C9kZUzp4--oKnDAMmJVOWQ 
_model_server_result.datetime_utc      '2024-10-10 23:27:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mat 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":901}' 
#
_entry.id    6MAT 
#
_exptl.entry_id    6MAT 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     6MAT 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 3 ATP A 1 901 901 ATP ATP . 
I 3 ATP A 1 902 902 ATP ATP . 
J 3 ATP B 1 901 901 ATP ATP . 
K 3 ATP B 1 902 902 ATP ATP . 
L 3 ATP C 1 901 901 ATP ATP . 
M 3 ATP C 1 902 902 ATP ATP . 
N 3 ATP D 1 901 901 ATP ATP . 
O 3 ATP D 1 902 902 ATP ATP . 
P 3 ATP E 1 901 902 ATP ATP . 
Q 3 ATP F 1 901 901 ATP ATP . 
R 3 ATP F 1 902 902 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . J 3 124.08 161.477 110.501 1 0.01 ? PG ATP 901 B 1 
HETATM 2 O O1G ATP . . . J 3 124.405 160.095 110.015 1 0.01 ? O1G ATP 901 B 1 
HETATM 3 O O2G ATP . . . J 3 123.631 161.477 111.955 1 0.01 ? O2G ATP 901 B 1 
HETATM 4 O O3G ATP . . . J 3 125.084 162.562 110.137 1 0.01 ? O3G ATP 901 B 1 
HETATM 5 P PB ATP . . . J 3 121.422 162.323 109.999 1 0.01 ? PB ATP 901 B 1 
HETATM 6 O O1B ATP . . . J 3 120.609 162.256 108.735 1 0.01 ? O1B ATP 901 B 1 
HETATM 7 O O2B ATP . . . J 3 121.047 161.619 111.296 1 0.01 ? O2B ATP 901 B 1 
HETATM 8 O O3B ATP . . . J 3 122.837 161.752 109.524 1 0.01 ? O3B ATP 901 B 1 
HETATM 9 P PA ATP . . . J 3 121.584 164.498 111.743 1 0.01 ? PA ATP 901 B 1 
HETATM 10 O O1A ATP . . . J 3 120.18 164.783 112.163 1 0.01 ? O1A ATP 901 B 1 
HETATM 11 O O2A ATP . . . J 3 122.489 163.705 112.66 1 0.01 ? O2A ATP 901 B 1 
HETATM 12 O O3A ATP . . . J 3 121.624 163.898 110.254 1 0.01 ? O3A ATP 901 B 1 
HETATM 13 O O5' ATP . . . J 3 122.284 165.893 111.463 1 0.01 ? O5' ATP 901 B 1 
HETATM 14 C C5' ATP . . . J 3 123.704 165.866 111.491 1 0.01 ? C5' ATP 901 B 1 
HETATM 15 C C4' ATP . . . J 3 124.221 167.296 111.407 1 0.01 ? C4' ATP 901 B 1 
HETATM 16 O O4' ATP . . . J 3 123.951 167.814 110.099 1 0.01 ? O4' ATP 901 B 1 
HETATM 17 C C3' ATP . . . J 3 123.626 168.248 112.459 1 0.01 ? C3' ATP 901 B 1 
HETATM 18 O O3' ATP . . . J 3 124.576 168.594 113.495 1 0.01 ? O3' ATP 901 B 1 
HETATM 19 C C2' ATP . . . J 3 123.178 169.478 111.666 1 0.01 ? C2' ATP 901 B 1 
HETATM 20 O O2' ATP . . . J 3 123.865 170.667 112.105 1 0.01 ? O2' ATP 901 B 1 
HETATM 21 C C1' ATP . . . J 3 123.449 169.158 110.187 1 0.01 ? C1' ATP 901 B 1 
HETATM 22 N N9 ATP . . . J 3 122.19 169.22 109.407 1 0.01 ? N9 ATP 901 B 1 
HETATM 23 C C8 ATP . . . J 3 121.82 168.33 108.468 1 0.01 ? C8 ATP 901 B 1 
HETATM 24 N N7 ATP . . . J 3 120.617 168.665 107.941 1 0.01 ? N7 ATP 901 B 1 
HETATM 25 C C5 ATP . . . J 3 120.205 169.796 108.555 1 0.01 ? C5 ATP 901 B 1 
HETATM 26 C C6 ATP . . . J 3 119.021 170.684 108.472 1 0.07 ? C6 ATP 901 B 1 
HETATM 27 N N6 ATP . . . J 3 118.013 170.422 107.605 1 0.01 ? N6 ATP 901 B 1 
HETATM 28 N N1 ATP . . . J 3 118.988 171.76 109.291 1 0.24 ? N1 ATP 901 B 1 
HETATM 29 C C2 ATP . . . J 3 119.99 172.026 110.156 1 0.12 ? C2 ATP 901 B 1 
HETATM 30 N N3 ATP . . . J 3 121.094 171.269 110.289 1 0.01 ? N3 ATP 901 B 1 
HETATM 31 C C4 ATP . . . J 3 121.251 170.159 109.525 1 0.01 ? C4 ATP 901 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#