data_6MBA # _model_server_result.job_id '_p-5CxIIGJo1-Dgj1vv0fg' _model_server_result.datetime_utc '2024-11-21 14:14:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mba # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":203}' # _entry.id 6MBA # _exptl.entry_id 6MBA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 123.65 _cell.angle_gamma 90 _cell.entry_id 6MBA _cell.length_a 112.72 _cell.length_b 29.041 _cell.length_c 94.991 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 86 n n C1 C2 EDO sing 87 n n C1 H11 EDO sing 88 n n C1 H12 EDO sing 89 n n O1 HO1 EDO sing 90 n n C2 O2 EDO sing 91 n n C2 H21 EDO sing 92 n n C2 H22 EDO sing 93 n n O2 HO2 EDO sing 94 n n # _atom_sites.entry_id 6MBA _atom_sites.fract_transf_matrix[1][1] 0.008872 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005905 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL A 1 2001 2001 CL CL . D 3 CL A 1 2002 2002 CL CL . E 3 CL B 1 201 201 CL CL . F 3 CL B 1 202 202 CL CL . G 4 EDO B 1 203 301 EDO EDO . H 5 CO3 B 1 204 302 CO3 CO3 . I 6 TRS B 1 205 303 TRS TRS . J 7 HOH A 1 2101 3009 HOH HOH . J 7 HOH A 2 2102 3039 HOH HOH . J 7 HOH A 3 2103 3053 HOH HOH . J 7 HOH A 4 2104 3012 HOH HOH . J 7 HOH A 5 2105 3054 HOH HOH . J 7 HOH A 6 2106 3031 HOH HOH . J 7 HOH A 7 2107 3038 HOH HOH . J 7 HOH A 8 2108 3002 HOH HOH . J 7 HOH A 9 2109 3016 HOH HOH . J 7 HOH A 10 2110 3006 HOH HOH . J 7 HOH A 11 2111 3003 HOH HOH . J 7 HOH A 12 2112 3032 HOH HOH . J 7 HOH A 13 2113 3051 HOH HOH . J 7 HOH A 14 2114 3049 HOH HOH . J 7 HOH A 15 2115 3055 HOH HOH . J 7 HOH A 16 2116 3029 HOH HOH . J 7 HOH A 17 2117 3028 HOH HOH . J 7 HOH A 18 2118 3010 HOH HOH . J 7 HOH A 19 2119 3005 HOH HOH . J 7 HOH A 20 2120 3025 HOH HOH . J 7 HOH A 21 2121 3041 HOH HOH . J 7 HOH A 22 2122 3046 HOH HOH . J 7 HOH A 23 2123 3020 HOH HOH . J 7 HOH A 24 2124 3011 HOH HOH . J 7 HOH A 25 2125 3013 HOH HOH . J 7 HOH A 26 2126 3014 HOH HOH . J 7 HOH A 27 2127 3024 HOH HOH . J 7 HOH A 28 2128 3004 HOH HOH . J 7 HOH A 29 2129 3044 HOH HOH . J 7 HOH A 30 2130 3035 HOH HOH . J 7 HOH A 31 2131 3050 HOH HOH . J 7 HOH A 32 2132 3027 HOH HOH . J 7 HOH A 33 2133 3052 HOH HOH . J 7 HOH A 34 2134 3036 HOH HOH . J 7 HOH A 35 2135 3040 HOH HOH . J 7 HOH A 36 2136 3001 HOH HOH . J 7 HOH A 37 2137 3008 HOH HOH . J 7 HOH A 38 2138 3007 HOH HOH . J 7 HOH A 39 2139 3023 HOH HOH . J 7 HOH A 40 2140 3043 HOH HOH . J 7 HOH A 41 2141 3033 HOH HOH . J 7 HOH A 42 2142 3037 HOH HOH . J 7 HOH A 43 2143 3047 HOH HOH . J 7 HOH A 44 2144 3045 HOH HOH . J 7 HOH A 45 2145 3042 HOH HOH . J 7 HOH A 46 2146 3026 HOH HOH . J 7 HOH A 47 2147 3048 HOH HOH . J 7 HOH A 48 2148 3019 HOH HOH . J 7 HOH A 49 2149 3030 HOH HOH . J 7 HOH A 50 2150 3022 HOH HOH . J 7 HOH A 51 2151 3021 HOH HOH . K 7 HOH B 1 301 458 HOH HOH . K 7 HOH B 2 302 462 HOH HOH . K 7 HOH B 3 303 415 HOH HOH . K 7 HOH B 4 304 461 HOH HOH . K 7 HOH B 5 305 437 HOH HOH . K 7 HOH B 6 306 411 HOH HOH . K 7 HOH B 7 307 407 HOH HOH . K 7 HOH B 8 308 464 HOH HOH . K 7 HOH B 9 309 465 HOH HOH . K 7 HOH B 10 310 419 HOH HOH . K 7 HOH B 11 311 427 HOH HOH . K 7 HOH B 12 312 444 HOH HOH . K 7 HOH B 13 313 449 HOH HOH . K 7 HOH B 14 314 413 HOH HOH . K 7 HOH B 15 315 451 HOH HOH . K 7 HOH B 16 316 425 HOH HOH . K 7 HOH B 17 317 424 HOH HOH . K 7 HOH B 18 318 409 HOH HOH . K 7 HOH B 19 319 439 HOH HOH . K 7 HOH B 20 320 445 HOH HOH . K 7 HOH B 21 321 450 HOH HOH . K 7 HOH B 22 322 443 HOH HOH . K 7 HOH B 23 323 452 HOH HOH . K 7 HOH B 24 324 420 HOH HOH . K 7 HOH B 25 325 428 HOH HOH . K 7 HOH B 26 326 406 HOH HOH . K 7 HOH B 27 327 431 HOH HOH . K 7 HOH B 28 328 414 HOH HOH . K 7 HOH B 29 329 408 HOH HOH . K 7 HOH B 30 330 426 HOH HOH . K 7 HOH B 31 331 402 HOH HOH . K 7 HOH B 32 332 401 HOH HOH . K 7 HOH B 33 333 404 HOH HOH . K 7 HOH B 34 334 459 HOH HOH . K 7 HOH B 35 335 421 HOH HOH . K 7 HOH B 36 336 412 HOH HOH . K 7 HOH B 37 337 434 HOH HOH . K 7 HOH B 38 338 405 HOH HOH . K 7 HOH B 39 339 422 HOH HOH . K 7 HOH B 40 340 416 HOH HOH . K 7 HOH B 41 341 430 HOH HOH . K 7 HOH B 42 342 440 HOH HOH . K 7 HOH B 43 343 453 HOH HOH . K 7 HOH B 44 344 410 HOH HOH . K 7 HOH B 45 345 442 HOH HOH . K 7 HOH B 46 346 418 HOH HOH . K 7 HOH B 47 347 460 HOH HOH . K 7 HOH B 48 348 433 HOH HOH . K 7 HOH B 49 349 441 HOH HOH . K 7 HOH B 50 350 432 HOH HOH . K 7 HOH B 51 351 446 HOH HOH . K 7 HOH B 52 352 429 HOH HOH . K 7 HOH B 53 353 417 HOH HOH . K 7 HOH B 54 354 463 HOH HOH . K 7 HOH B 55 355 403 HOH HOH . K 7 HOH B 56 356 423 HOH HOH . K 7 HOH B 57 357 456 HOH HOH . K 7 HOH B 58 358 447 HOH HOH . K 7 HOH B 59 359 448 HOH HOH . K 7 HOH B 60 360 454 HOH HOH . K 7 HOH B 61 361 455 HOH HOH . K 7 HOH B 62 362 3018 HOH HOH . K 7 HOH B 63 363 435 HOH HOH . K 7 HOH B 64 364 436 HOH HOH . K 7 HOH B 65 365 457 HOH HOH . K 7 HOH B 66 366 3034 HOH HOH . K 7 HOH B 67 367 3015 HOH HOH . K 7 HOH B 68 368 3017 HOH HOH . K 7 HOH B 69 369 438 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 4 34.618 -9.631 38.211 1 52.05 ? C1 EDO 203 B 1 HETATM 2 O O1 EDO . . . G 4 33.642 -10.139 37.301 1 66.05 ? O1 EDO 203 B 1 HETATM 3 C C2 EDO . . . G 4 34.159 -9.878 39.639 1 41.31 ? C2 EDO 203 B 1 HETATM 4 O O2 EDO . . . G 4 35.286 -9.824 40.512 1 39.09 ? O2 EDO 203 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #