data_6MBD
#
_model_server_result.job_id            -cBCkfvDi72GqOktpQSO1g 
_model_server_result.datetime_utc      '2024-11-04 23:16:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mbd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":402}' 
#
_entry.id    6MBD 
#
_exptl.entry_id    6MBD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MBD 
_cell.length_a            64.792 
_cell.length_b            69.733 
_cell.length_c            84.853 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MBD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,K,M 1 1 
B,D,I,J,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N GLY 1 A GLY 170 1_555 H ZN ZN . A ZN 404 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? 
metalc ? metalc2 A O GLY 1 A GLY 170 1_555 H ZN ZN . A ZN 404 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc3 A NE2 HIS 55 A HIS 224 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc4 A NE2 HIS 55 A HIS 224 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc5 A OE2 GLU 71 A GLU 240 1_555 J ZN ZN . B ZN 402 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? 
metalc ? metalc6 A NE2 HIS 83 A HIS 252 1_555 G ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc7 A SG CYS 117 A CYS 286 1_555 J ZN ZN . B ZN 402 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc8 A OD1 ASP 135 A ASP 304 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc9 A O HIS 151 A HIS 320 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc10 A ND1 HIS 151 A HIS 320 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc11 E ZN ZN . A ZN 401 1_555 K O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc12 E ZN ZN . A ZN 401 1_555 B NE2 HIS 83 B HIS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc13 F ZN ZN . A ZN 402 4_455 B NE2 HIS 151 B HIS 320 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc14 F ZN ZN . A ZN 402 4_455 B NE2 HIS 151 B HIS 320 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.41 ? 
metalc ? metalc15 F ZN ZN . A ZN 402 4_455 B OE1 GLU 153 B GLU 322 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc16 F ZN ZN . A ZN 402 1_555 C OE1 GLU 18 C GLU 13 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc17 F ZN ZN . A ZN 402 1_555 C OE2 GLU 18 C GLU 13 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc18 G ZN ZN . A ZN 403 1_555 B OD1 ASP 135 B ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc19 G ZN ZN . A ZN 403 1_555 B OD2 ASP 135 B ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc20 G ZN ZN . A ZN 403 1_555 L O HOH . B HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc21 G ZN ZN . A ZN 403 1_555 C NZ LYS 6 C LYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc22 K O HOH . A HOH 514 4_445 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? 
metalc ? metalc23 B OD1 ASP 67 B ASP 236 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc24 B NE2 HIS 108 B HIS 277 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? 
metalc ? metalc25 I ZN ZN . B ZN 401 1_555 L O HOH . B HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc26 I ZN ZN . B ZN 401 1_555 L O HOH . B HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6MBD 
_atom_sites.fract_transf_matrix[1][1]    0.015434 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01434 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011785 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ZN A 1 401 4 ZN ZN . 
F 3 ZN A 1 402 5 ZN ZN . 
G 3 ZN A 1 403 6 ZN ZN . 
H 3 ZN A 1 404 7 ZN ZN . 
I 3 ZN B 1 401 1 ZN ZN . 
J 3 ZN B 1 402 2 ZN ZN . 
K 4 HOH A 1 501 220 HOH HOH . 
K 4 HOH A 2 502 11 HOH HOH . 
K 4 HOH A 3 503 150 HOH HOH . 
K 4 HOH A 4 504 202 HOH HOH . 
K 4 HOH A 5 505 104 HOH HOH . 
K 4 HOH A 6 506 89 HOH HOH . 
K 4 HOH A 7 507 139 HOH HOH . 
K 4 HOH A 8 508 196 HOH HOH . 
K 4 HOH A 9 509 154 HOH HOH . 
K 4 HOH A 10 510 59 HOH HOH . 
K 4 HOH A 11 511 46 HOH HOH . 
K 4 HOH A 12 512 5 HOH HOH . 
K 4 HOH A 13 513 168 HOH HOH . 
K 4 HOH A 14 514 81 HOH HOH . 
K 4 HOH A 15 515 161 HOH HOH . 
K 4 HOH A 16 516 182 HOH HOH . 
K 4 HOH A 17 517 121 HOH HOH . 
K 4 HOH A 18 518 1 HOH HOH . 
K 4 HOH A 19 519 94 HOH HOH . 
K 4 HOH A 20 520 127 HOH HOH . 
K 4 HOH A 21 521 13 HOH HOH . 
K 4 HOH A 22 522 21 HOH HOH . 
K 4 HOH A 23 523 41 HOH HOH . 
K 4 HOH A 24 524 15 HOH HOH . 
K 4 HOH A 25 525 123 HOH HOH . 
K 4 HOH A 26 526 2 HOH HOH . 
K 4 HOH A 27 527 172 HOH HOH . 
K 4 HOH A 28 528 71 HOH HOH . 
K 4 HOH A 29 529 151 HOH HOH . 
K 4 HOH A 30 530 58 HOH HOH . 
K 4 HOH A 31 531 17 HOH HOH . 
K 4 HOH A 32 532 82 HOH HOH . 
K 4 HOH A 33 533 16 HOH HOH . 
K 4 HOH A 34 534 73 HOH HOH . 
K 4 HOH A 35 535 54 HOH HOH . 
K 4 HOH A 36 536 8 HOH HOH . 
K 4 HOH A 37 537 6 HOH HOH . 
K 4 HOH A 38 538 63 HOH HOH . 
K 4 HOH A 39 539 64 HOH HOH . 
K 4 HOH A 40 540 22 HOH HOH . 
K 4 HOH A 41 541 77 HOH HOH . 
K 4 HOH A 42 542 24 HOH HOH . 
K 4 HOH A 43 543 142 HOH HOH . 
K 4 HOH A 44 544 56 HOH HOH . 
K 4 HOH A 45 545 40 HOH HOH . 
K 4 HOH A 46 546 119 HOH HOH . 
K 4 HOH A 47 547 4 HOH HOH . 
K 4 HOH A 48 548 158 HOH HOH . 
K 4 HOH A 49 549 10 HOH HOH . 
K 4 HOH A 50 550 49 HOH HOH . 
K 4 HOH A 51 551 32 HOH HOH . 
K 4 HOH A 52 552 62 HOH HOH . 
K 4 HOH A 53 553 67 HOH HOH . 
K 4 HOH A 54 554 97 HOH HOH . 
K 4 HOH A 55 555 183 HOH HOH . 
K 4 HOH A 56 556 7 HOH HOH . 
K 4 HOH A 57 557 3 HOH HOH . 
K 4 HOH A 58 558 109 HOH HOH . 
K 4 HOH A 59 559 116 HOH HOH . 
K 4 HOH A 60 560 91 HOH HOH . 
K 4 HOH A 61 561 47 HOH HOH . 
K 4 HOH A 62 562 30 HOH HOH . 
K 4 HOH A 63 563 190 HOH HOH . 
K 4 HOH A 64 564 100 HOH HOH . 
K 4 HOH A 65 565 23 HOH HOH . 
K 4 HOH A 66 566 218 HOH HOH . 
K 4 HOH A 67 567 57 HOH HOH . 
K 4 HOH A 68 568 198 HOH HOH . 
K 4 HOH A 69 569 115 HOH HOH . 
K 4 HOH A 70 570 192 HOH HOH . 
K 4 HOH A 71 571 99 HOH HOH . 
K 4 HOH A 72 572 149 HOH HOH . 
K 4 HOH A 73 573 179 HOH HOH . 
K 4 HOH A 74 574 144 HOH HOH . 
K 4 HOH A 75 575 173 HOH HOH . 
K 4 HOH A 76 576 184 HOH HOH . 
K 4 HOH A 77 577 79 HOH HOH . 
K 4 HOH A 78 578 103 HOH HOH . 
K 4 HOH A 79 579 43 HOH HOH . 
K 4 HOH A 80 580 145 HOH HOH . 
K 4 HOH A 81 581 169 HOH HOH . 
K 4 HOH A 82 582 148 HOH HOH . 
K 4 HOH A 83 583 138 HOH HOH . 
K 4 HOH A 84 584 203 HOH HOH . 
K 4 HOH A 85 585 122 HOH HOH . 
K 4 HOH A 86 586 185 HOH HOH . 
L 4 HOH B 1 501 83 HOH HOH . 
L 4 HOH B 2 502 110 HOH HOH . 
L 4 HOH B 3 503 93 HOH HOH . 
L 4 HOH B 4 504 84 HOH HOH . 
L 4 HOH B 5 505 80 HOH HOH . 
L 4 HOH B 6 506 206 HOH HOH . 
L 4 HOH B 7 507 155 HOH HOH . 
L 4 HOH B 8 508 133 HOH HOH . 
L 4 HOH B 9 509 137 HOH HOH . 
L 4 HOH B 10 510 74 HOH HOH . 
L 4 HOH B 11 511 60 HOH HOH . 
L 4 HOH B 12 512 50 HOH HOH . 
L 4 HOH B 13 513 65 HOH HOH . 
L 4 HOH B 14 514 76 HOH HOH . 
L 4 HOH B 15 515 171 HOH HOH . 
L 4 HOH B 16 516 108 HOH HOH . 
L 4 HOH B 17 517 126 HOH HOH . 
L 4 HOH B 18 518 9 HOH HOH . 
L 4 HOH B 19 519 39 HOH HOH . 
L 4 HOH B 20 520 18 HOH HOH . 
L 4 HOH B 21 521 12 HOH HOH . 
L 4 HOH B 22 522 37 HOH HOH . 
L 4 HOH B 23 523 152 HOH HOH . 
L 4 HOH B 24 524 78 HOH HOH . 
L 4 HOH B 25 525 29 HOH HOH . 
L 4 HOH B 26 526 102 HOH HOH . 
L 4 HOH B 27 527 34 HOH HOH . 
L 4 HOH B 28 528 107 HOH HOH . 
L 4 HOH B 29 529 51 HOH HOH . 
L 4 HOH B 30 530 55 HOH HOH . 
L 4 HOH B 31 531 146 HOH HOH . 
L 4 HOH B 32 532 26 HOH HOH . 
L 4 HOH B 33 533 48 HOH HOH . 
L 4 HOH B 34 534 27 HOH HOH . 
L 4 HOH B 35 535 45 HOH HOH . 
L 4 HOH B 36 536 36 HOH HOH . 
L 4 HOH B 37 537 38 HOH HOH . 
L 4 HOH B 38 538 70 HOH HOH . 
L 4 HOH B 39 539 191 HOH HOH . 
L 4 HOH B 40 540 125 HOH HOH . 
L 4 HOH B 41 541 153 HOH HOH . 
L 4 HOH B 42 542 164 HOH HOH . 
L 4 HOH B 43 543 135 HOH HOH . 
L 4 HOH B 44 544 195 HOH HOH . 
L 4 HOH B 45 545 92 HOH HOH . 
L 4 HOH B 46 546 88 HOH HOH . 
L 4 HOH B 47 547 167 HOH HOH . 
L 4 HOH B 48 548 31 HOH HOH . 
L 4 HOH B 49 549 157 HOH HOH . 
L 4 HOH B 50 550 212 HOH HOH . 
L 4 HOH B 51 551 117 HOH HOH . 
L 4 HOH B 52 552 159 HOH HOH . 
L 4 HOH B 53 553 68 HOH HOH . 
L 4 HOH B 54 554 111 HOH HOH . 
L 4 HOH B 55 555 132 HOH HOH . 
L 4 HOH B 56 556 25 HOH HOH . 
L 4 HOH B 57 557 33 HOH HOH . 
L 4 HOH B 58 558 170 HOH HOH . 
L 4 HOH B 59 559 143 HOH HOH . 
L 4 HOH B 60 560 96 HOH HOH . 
L 4 HOH B 61 561 20 HOH HOH . 
L 4 HOH B 62 562 120 HOH HOH . 
L 4 HOH B 63 563 181 HOH HOH . 
L 4 HOH B 64 564 113 HOH HOH . 
L 4 HOH B 65 565 147 HOH HOH . 
L 4 HOH B 66 566 205 HOH HOH . 
L 4 HOH B 67 567 95 HOH HOH . 
L 4 HOH B 68 568 180 HOH HOH . 
L 4 HOH B 69 569 163 HOH HOH . 
L 4 HOH B 70 570 124 HOH HOH . 
L 4 HOH B 71 571 194 HOH HOH . 
L 4 HOH B 72 572 69 HOH HOH . 
L 4 HOH B 73 573 131 HOH HOH . 
L 4 HOH B 74 574 129 HOH HOH . 
L 4 HOH B 75 575 118 HOH HOH . 
L 4 HOH B 76 576 216 HOH HOH . 
L 4 HOH B 77 577 128 HOH HOH . 
L 4 HOH B 78 578 112 HOH HOH . 
L 4 HOH B 79 579 204 HOH HOH . 
L 4 HOH B 80 580 86 HOH HOH . 
M 4 HOH C 1 101 136 HOH HOH . 
M 4 HOH C 2 102 28 HOH HOH . 
M 4 HOH C 3 103 174 HOH HOH . 
M 4 HOH C 4 104 66 HOH HOH . 
M 4 HOH C 5 105 208 HOH HOH . 
M 4 HOH C 6 106 35 HOH HOH . 
M 4 HOH C 7 107 14 HOH HOH . 
M 4 HOH C 8 108 19 HOH HOH . 
M 4 HOH C 9 109 134 HOH HOH . 
M 4 HOH C 10 110 44 HOH HOH . 
M 4 HOH C 11 111 213 HOH HOH . 
M 4 HOH C 12 112 210 HOH HOH . 
M 4 HOH C 13 113 217 HOH HOH . 
M 4 HOH C 14 114 42 HOH HOH . 
M 4 HOH C 15 115 166 HOH HOH . 
M 4 HOH C 16 116 160 HOH HOH . 
N 4 HOH D 1 101 223 HOH HOH . 
N 4 HOH D 2 102 61 HOH HOH . 
N 4 HOH D 3 103 114 HOH HOH . 
N 4 HOH D 4 104 162 HOH HOH . 
N 4 HOH D 5 105 130 HOH HOH . 
N 4 HOH D 6 106 106 HOH HOH . 
N 4 HOH D 7 107 199 HOH HOH . 
N 4 HOH D 8 108 53 HOH HOH . 
N 4 HOH D 9 109 105 HOH HOH . 
N 4 HOH D 10 110 215 HOH HOH . 
N 4 HOH D 11 111 156 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -40.21 
_atom_site.Cartn_y               -25.632 
_atom_site.Cartn_z               7.862 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        32.61 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#