data_6MBD # _model_server_result.job_id BTs9qkc0gziO8r7C_s3wuQ _model_server_result.datetime_utc '2024-11-04 23:16:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mbd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":403}' # _entry.id 6MBD # _exptl.entry_id 6MBD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MBD _cell.length_a 64.792 _cell.length_b 69.733 _cell.length_c 84.853 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MBD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,K,M 1 1 B,D,I,J,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N GLY 1 A GLY 170 1_555 H ZN ZN . A ZN 404 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? metalc ? metalc2 A O GLY 1 A GLY 170 1_555 H ZN ZN . A ZN 404 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc3 A NE2 HIS 55 A HIS 224 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.113 ? metalc ? metalc4 A NE2 HIS 55 A HIS 224 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.375 ? metalc ? metalc5 A OE2 GLU 71 A GLU 240 1_555 J ZN ZN . B ZN 402 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc6 A NE2 HIS 83 A HIS 252 1_555 G ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc7 A SG CYS 117 A CYS 286 1_555 J ZN ZN . B ZN 402 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc8 A OD1 ASP 135 A ASP 304 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc9 A O HIS 151 A HIS 320 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc10 A ND1 HIS 151 A HIS 320 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc11 E ZN ZN . A ZN 401 1_555 K O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc12 E ZN ZN . A ZN 401 1_555 B NE2 HIS 83 B HIS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc13 F ZN ZN . A ZN 402 4_455 B NE2 HIS 151 B HIS 320 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc14 F ZN ZN . A ZN 402 4_455 B NE2 HIS 151 B HIS 320 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc15 F ZN ZN . A ZN 402 4_455 B OE1 GLU 153 B GLU 322 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc16 F ZN ZN . A ZN 402 1_555 C OE1 GLU 18 C GLU 13 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc17 F ZN ZN . A ZN 402 1_555 C OE2 GLU 18 C GLU 13 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc18 G ZN ZN . A ZN 403 1_555 B OD1 ASP 135 B ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc19 G ZN ZN . A ZN 403 1_555 B OD2 ASP 135 B ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc20 G ZN ZN . A ZN 403 1_555 L O HOH . B HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc21 G ZN ZN . A ZN 403 1_555 C NZ LYS 6 C LYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc22 K O HOH . A HOH 514 4_445 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc23 B OD1 ASP 67 B ASP 236 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc24 B NE2 HIS 108 B HIS 277 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc25 I ZN ZN . B ZN 401 1_555 L O HOH . B HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc26 I ZN ZN . B ZN 401 1_555 L O HOH . B HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6MBD _atom_sites.fract_transf_matrix[1][1] 0.015434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 401 4 ZN ZN . F 3 ZN A 1 402 5 ZN ZN . G 3 ZN A 1 403 6 ZN ZN . H 3 ZN A 1 404 7 ZN ZN . I 3 ZN B 1 401 1 ZN ZN . J 3 ZN B 1 402 2 ZN ZN . K 4 HOH A 1 501 220 HOH HOH . K 4 HOH A 2 502 11 HOH HOH . K 4 HOH A 3 503 150 HOH HOH . K 4 HOH A 4 504 202 HOH HOH . K 4 HOH A 5 505 104 HOH HOH . K 4 HOH A 6 506 89 HOH HOH . K 4 HOH A 7 507 139 HOH HOH . K 4 HOH A 8 508 196 HOH HOH . K 4 HOH A 9 509 154 HOH HOH . K 4 HOH A 10 510 59 HOH HOH . K 4 HOH A 11 511 46 HOH HOH . K 4 HOH A 12 512 5 HOH HOH . K 4 HOH A 13 513 168 HOH HOH . K 4 HOH A 14 514 81 HOH HOH . K 4 HOH A 15 515 161 HOH HOH . K 4 HOH A 16 516 182 HOH HOH . K 4 HOH A 17 517 121 HOH HOH . K 4 HOH A 18 518 1 HOH HOH . K 4 HOH A 19 519 94 HOH HOH . K 4 HOH A 20 520 127 HOH HOH . K 4 HOH A 21 521 13 HOH HOH . K 4 HOH A 22 522 21 HOH HOH . K 4 HOH A 23 523 41 HOH HOH . K 4 HOH A 24 524 15 HOH HOH . K 4 HOH A 25 525 123 HOH HOH . K 4 HOH A 26 526 2 HOH HOH . K 4 HOH A 27 527 172 HOH HOH . K 4 HOH A 28 528 71 HOH HOH . K 4 HOH A 29 529 151 HOH HOH . K 4 HOH A 30 530 58 HOH HOH . K 4 HOH A 31 531 17 HOH HOH . K 4 HOH A 32 532 82 HOH HOH . K 4 HOH A 33 533 16 HOH HOH . K 4 HOH A 34 534 73 HOH HOH . K 4 HOH A 35 535 54 HOH HOH . K 4 HOH A 36 536 8 HOH HOH . K 4 HOH A 37 537 6 HOH HOH . K 4 HOH A 38 538 63 HOH HOH . K 4 HOH A 39 539 64 HOH HOH . K 4 HOH A 40 540 22 HOH HOH . K 4 HOH A 41 541 77 HOH HOH . K 4 HOH A 42 542 24 HOH HOH . K 4 HOH A 43 543 142 HOH HOH . K 4 HOH A 44 544 56 HOH HOH . K 4 HOH A 45 545 40 HOH HOH . K 4 HOH A 46 546 119 HOH HOH . K 4 HOH A 47 547 4 HOH HOH . K 4 HOH A 48 548 158 HOH HOH . K 4 HOH A 49 549 10 HOH HOH . K 4 HOH A 50 550 49 HOH HOH . K 4 HOH A 51 551 32 HOH HOH . K 4 HOH A 52 552 62 HOH HOH . K 4 HOH A 53 553 67 HOH HOH . K 4 HOH A 54 554 97 HOH HOH . K 4 HOH A 55 555 183 HOH HOH . K 4 HOH A 56 556 7 HOH HOH . K 4 HOH A 57 557 3 HOH HOH . K 4 HOH A 58 558 109 HOH HOH . K 4 HOH A 59 559 116 HOH HOH . K 4 HOH A 60 560 91 HOH HOH . K 4 HOH A 61 561 47 HOH HOH . K 4 HOH A 62 562 30 HOH HOH . K 4 HOH A 63 563 190 HOH HOH . K 4 HOH A 64 564 100 HOH HOH . K 4 HOH A 65 565 23 HOH HOH . K 4 HOH A 66 566 218 HOH HOH . K 4 HOH A 67 567 57 HOH HOH . K 4 HOH A 68 568 198 HOH HOH . K 4 HOH A 69 569 115 HOH HOH . K 4 HOH A 70 570 192 HOH HOH . K 4 HOH A 71 571 99 HOH HOH . K 4 HOH A 72 572 149 HOH HOH . K 4 HOH A 73 573 179 HOH HOH . K 4 HOH A 74 574 144 HOH HOH . K 4 HOH A 75 575 173 HOH HOH . K 4 HOH A 76 576 184 HOH HOH . K 4 HOH A 77 577 79 HOH HOH . K 4 HOH A 78 578 103 HOH HOH . K 4 HOH A 79 579 43 HOH HOH . K 4 HOH A 80 580 145 HOH HOH . K 4 HOH A 81 581 169 HOH HOH . K 4 HOH A 82 582 148 HOH HOH . K 4 HOH A 83 583 138 HOH HOH . K 4 HOH A 84 584 203 HOH HOH . K 4 HOH A 85 585 122 HOH HOH . K 4 HOH A 86 586 185 HOH HOH . L 4 HOH B 1 501 83 HOH HOH . L 4 HOH B 2 502 110 HOH HOH . L 4 HOH B 3 503 93 HOH HOH . L 4 HOH B 4 504 84 HOH HOH . L 4 HOH B 5 505 80 HOH HOH . L 4 HOH B 6 506 206 HOH HOH . L 4 HOH B 7 507 155 HOH HOH . L 4 HOH B 8 508 133 HOH HOH . L 4 HOH B 9 509 137 HOH HOH . L 4 HOH B 10 510 74 HOH HOH . L 4 HOH B 11 511 60 HOH HOH . L 4 HOH B 12 512 50 HOH HOH . L 4 HOH B 13 513 65 HOH HOH . L 4 HOH B 14 514 76 HOH HOH . L 4 HOH B 15 515 171 HOH HOH . L 4 HOH B 16 516 108 HOH HOH . L 4 HOH B 17 517 126 HOH HOH . L 4 HOH B 18 518 9 HOH HOH . L 4 HOH B 19 519 39 HOH HOH . L 4 HOH B 20 520 18 HOH HOH . L 4 HOH B 21 521 12 HOH HOH . L 4 HOH B 22 522 37 HOH HOH . L 4 HOH B 23 523 152 HOH HOH . L 4 HOH B 24 524 78 HOH HOH . L 4 HOH B 25 525 29 HOH HOH . L 4 HOH B 26 526 102 HOH HOH . L 4 HOH B 27 527 34 HOH HOH . L 4 HOH B 28 528 107 HOH HOH . L 4 HOH B 29 529 51 HOH HOH . L 4 HOH B 30 530 55 HOH HOH . L 4 HOH B 31 531 146 HOH HOH . L 4 HOH B 32 532 26 HOH HOH . L 4 HOH B 33 533 48 HOH HOH . L 4 HOH B 34 534 27 HOH HOH . L 4 HOH B 35 535 45 HOH HOH . L 4 HOH B 36 536 36 HOH HOH . L 4 HOH B 37 537 38 HOH HOH . L 4 HOH B 38 538 70 HOH HOH . L 4 HOH B 39 539 191 HOH HOH . L 4 HOH B 40 540 125 HOH HOH . L 4 HOH B 41 541 153 HOH HOH . L 4 HOH B 42 542 164 HOH HOH . L 4 HOH B 43 543 135 HOH HOH . L 4 HOH B 44 544 195 HOH HOH . L 4 HOH B 45 545 92 HOH HOH . L 4 HOH B 46 546 88 HOH HOH . L 4 HOH B 47 547 167 HOH HOH . L 4 HOH B 48 548 31 HOH HOH . L 4 HOH B 49 549 157 HOH HOH . L 4 HOH B 50 550 212 HOH HOH . L 4 HOH B 51 551 117 HOH HOH . L 4 HOH B 52 552 159 HOH HOH . L 4 HOH B 53 553 68 HOH HOH . L 4 HOH B 54 554 111 HOH HOH . L 4 HOH B 55 555 132 HOH HOH . L 4 HOH B 56 556 25 HOH HOH . L 4 HOH B 57 557 33 HOH HOH . L 4 HOH B 58 558 170 HOH HOH . L 4 HOH B 59 559 143 HOH HOH . L 4 HOH B 60 560 96 HOH HOH . L 4 HOH B 61 561 20 HOH HOH . L 4 HOH B 62 562 120 HOH HOH . L 4 HOH B 63 563 181 HOH HOH . L 4 HOH B 64 564 113 HOH HOH . L 4 HOH B 65 565 147 HOH HOH . L 4 HOH B 66 566 205 HOH HOH . L 4 HOH B 67 567 95 HOH HOH . L 4 HOH B 68 568 180 HOH HOH . L 4 HOH B 69 569 163 HOH HOH . L 4 HOH B 70 570 124 HOH HOH . L 4 HOH B 71 571 194 HOH HOH . L 4 HOH B 72 572 69 HOH HOH . L 4 HOH B 73 573 131 HOH HOH . L 4 HOH B 74 574 129 HOH HOH . L 4 HOH B 75 575 118 HOH HOH . L 4 HOH B 76 576 216 HOH HOH . L 4 HOH B 77 577 128 HOH HOH . L 4 HOH B 78 578 112 HOH HOH . L 4 HOH B 79 579 204 HOH HOH . L 4 HOH B 80 580 86 HOH HOH . M 4 HOH C 1 101 136 HOH HOH . M 4 HOH C 2 102 28 HOH HOH . M 4 HOH C 3 103 174 HOH HOH . M 4 HOH C 4 104 66 HOH HOH . M 4 HOH C 5 105 208 HOH HOH . M 4 HOH C 6 106 35 HOH HOH . M 4 HOH C 7 107 14 HOH HOH . M 4 HOH C 8 108 19 HOH HOH . M 4 HOH C 9 109 134 HOH HOH . M 4 HOH C 10 110 44 HOH HOH . M 4 HOH C 11 111 213 HOH HOH . M 4 HOH C 12 112 210 HOH HOH . M 4 HOH C 13 113 217 HOH HOH . M 4 HOH C 14 114 42 HOH HOH . M 4 HOH C 15 115 166 HOH HOH . M 4 HOH C 16 116 160 HOH HOH . N 4 HOH D 1 101 223 HOH HOH . N 4 HOH D 2 102 61 HOH HOH . N 4 HOH D 3 103 114 HOH HOH . N 4 HOH D 4 104 162 HOH HOH . N 4 HOH D 5 105 130 HOH HOH . N 4 HOH D 6 106 106 HOH HOH . N 4 HOH D 7 107 199 HOH HOH . N 4 HOH D 8 108 53 HOH HOH . N 4 HOH D 9 109 105 HOH HOH . N 4 HOH D 10 110 215 HOH HOH . N 4 HOH D 11 111 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -28.398 _atom_site.Cartn_y 11.564 _atom_site.Cartn_z 4.338 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #