data_6MBU # _model_server_result.job_id MpY_ZTO2fNtQhDhItDi8LA _model_server_result.datetime_utc '2024-11-22 22:07:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mbu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":203}' # _entry.id 6MBU # _exptl.entry_id 6MBU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MBU _cell.length_a 84.185 _cell.length_b 84.185 _cell.length_c 41.916 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MBU _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc2 A OD1 ASN 27 A ASN 26 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc3 C MG MG . A MG 201 1_555 F O3B GDP . A GDP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc4 C MG MG . A MG 201 1_555 M O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc5 C MG MG . A MG 201 1_555 M O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc6 C MG MG . A MG 201 1_555 M O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc7 C MG MG . A MG 201 1_555 M O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc8 D MG MG . A MG 202 1_555 M O HOH . A HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc9 D MG MG . A MG 202 1_555 M O HOH . A HOH 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc10 D MG MG . A MG 202 1_555 M O HOH . A HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc11 D MG MG . A MG 202 1_555 M O HOH . A HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc12 D MG MG . A MG 202 1_555 N O HOH . B HOH 327 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc13 E MG MG . A MG 203 1_555 M O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc14 E MG MG . A MG 203 1_555 M O HOH . A HOH 328 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc15 E MG MG . A MG 203 1_555 M O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc16 E MG MG . A MG 203 1_555 M O HOH . A HOH 366 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc17 M O HOH . A HOH 341 1_555 I MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc18 M O HOH . A HOH 382 1_555 I MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc19 B OG SER 18 B SER 17 1_555 H MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc20 H MG MG . B MG 201 1_555 J O2B GDP . B GDP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc21 H MG MG . B MG 201 1_555 N O HOH . B HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc22 H MG MG . B MG 201 1_555 N O HOH . B HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc23 H MG MG . B MG 201 1_555 N O HOH . B HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc24 H MG MG . B MG 201 1_555 N O HOH . B HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc25 I MG MG . B MG 202 1_555 N O HOH . B HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc26 I MG MG . B MG 202 1_555 N O HOH . B HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc27 I MG MG . B MG 202 1_555 N O HOH . B HOH 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 6MBU _atom_sites.fract_transf_matrix[1][1] 0.011879 _atom_sites.fract_transf_matrix[1][2] 0.006858 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023857 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 201 2 MG MG . D 2 MG A 1 202 4 MG MG . E 2 MG A 1 203 5 MG MG . F 3 GDP A 1 204 1 GDP GDP . G 4 GOL A 1 205 1 GOL GOL . H 2 MG B 1 201 1 MG MG . I 2 MG B 1 202 3 MG MG . J 3 GDP B 1 203 2 GDP GDP . K 4 GOL B 1 204 2 GOL GOL . L 4 GOL B 1 205 3 GOL GOL . M 5 HOH A 1 301 248 HOH HOH . M 5 HOH A 2 302 170 HOH HOH . M 5 HOH A 3 303 140 HOH HOH . M 5 HOH A 4 304 228 HOH HOH . M 5 HOH A 5 305 154 HOH HOH . M 5 HOH A 6 306 120 HOH HOH . M 5 HOH A 7 307 292 HOH HOH . M 5 HOH A 8 308 241 HOH HOH . M 5 HOH A 9 309 19 HOH HOH . M 5 HOH A 10 310 94 HOH HOH . M 5 HOH A 11 311 201 HOH HOH . M 5 HOH A 12 312 143 HOH HOH . M 5 HOH A 13 313 185 HOH HOH . M 5 HOH A 14 314 38 HOH HOH . M 5 HOH A 15 315 207 HOH HOH . M 5 HOH A 16 316 90 HOH HOH . M 5 HOH A 17 317 3 HOH HOH . M 5 HOH A 18 318 189 HOH HOH . M 5 HOH A 19 319 163 HOH HOH . M 5 HOH A 20 320 269 HOH HOH . M 5 HOH A 21 321 29 HOH HOH . M 5 HOH A 22 322 176 HOH HOH . M 5 HOH A 23 323 30 HOH HOH . M 5 HOH A 24 324 277 HOH HOH . M 5 HOH A 25 325 200 HOH HOH . M 5 HOH A 26 326 267 HOH HOH . M 5 HOH A 27 327 47 HOH HOH . M 5 HOH A 28 328 202 HOH HOH . M 5 HOH A 29 329 130 HOH HOH . M 5 HOH A 30 330 141 HOH HOH . M 5 HOH A 31 331 18 HOH HOH . M 5 HOH A 32 332 198 HOH HOH . M 5 HOH A 33 333 246 HOH HOH . M 5 HOH A 34 334 71 HOH HOH . M 5 HOH A 35 335 181 HOH HOH . M 5 HOH A 36 336 5 HOH HOH . M 5 HOH A 37 337 77 HOH HOH . M 5 HOH A 38 338 257 HOH HOH . M 5 HOH A 39 339 11 HOH HOH . M 5 HOH A 40 340 7 HOH HOH . M 5 HOH A 41 341 209 HOH HOH . M 5 HOH A 42 342 89 HOH HOH . M 5 HOH A 43 343 134 HOH HOH . M 5 HOH A 44 344 199 HOH HOH . M 5 HOH A 45 345 92 HOH HOH . M 5 HOH A 46 346 62 HOH HOH . M 5 HOH A 47 347 137 HOH HOH . M 5 HOH A 48 348 75 HOH HOH . M 5 HOH A 49 349 80 HOH HOH . M 5 HOH A 50 350 33 HOH HOH . M 5 HOH A 51 351 22 HOH HOH . M 5 HOH A 52 352 54 HOH HOH . M 5 HOH A 53 353 98 HOH HOH . M 5 HOH A 54 354 255 HOH HOH . M 5 HOH A 55 355 12 HOH HOH . M 5 HOH A 56 356 32 HOH HOH . M 5 HOH A 57 357 67 HOH HOH . M 5 HOH A 58 358 37 HOH HOH . M 5 HOH A 59 359 95 HOH HOH . M 5 HOH A 60 360 84 HOH HOH . M 5 HOH A 61 361 220 HOH HOH . M 5 HOH A 62 362 282 HOH HOH . M 5 HOH A 63 363 55 HOH HOH . M 5 HOH A 64 364 16 HOH HOH . M 5 HOH A 65 365 57 HOH HOH . M 5 HOH A 66 366 203 HOH HOH . M 5 HOH A 67 367 15 HOH HOH . M 5 HOH A 68 368 58 HOH HOH . M 5 HOH A 69 369 179 HOH HOH . M 5 HOH A 70 370 105 HOH HOH . M 5 HOH A 71 371 166 HOH HOH . M 5 HOH A 72 372 56 HOH HOH . M 5 HOH A 73 373 165 HOH HOH . M 5 HOH A 74 374 245 HOH HOH . M 5 HOH A 75 375 144 HOH HOH . M 5 HOH A 76 376 83 HOH HOH . M 5 HOH A 77 377 100 HOH HOH . M 5 HOH A 78 378 2 HOH HOH . M 5 HOH A 79 379 34 HOH HOH . M 5 HOH A 80 380 205 HOH HOH . M 5 HOH A 81 381 132 HOH HOH . M 5 HOH A 82 382 208 HOH HOH . M 5 HOH A 83 383 50 HOH HOH . M 5 HOH A 84 384 150 HOH HOH . M 5 HOH A 85 385 217 HOH HOH . M 5 HOH A 86 386 234 HOH HOH . M 5 HOH A 87 387 232 HOH HOH . M 5 HOH A 88 388 28 HOH HOH . M 5 HOH A 89 389 299 HOH HOH . M 5 HOH A 90 390 35 HOH HOH . M 5 HOH A 91 391 233 HOH HOH . M 5 HOH A 92 392 117 HOH HOH . M 5 HOH A 93 393 43 HOH HOH . M 5 HOH A 94 394 106 HOH HOH . M 5 HOH A 95 395 235 HOH HOH . M 5 HOH A 96 396 297 HOH HOH . M 5 HOH A 97 397 88 HOH HOH . M 5 HOH A 98 398 173 HOH HOH . M 5 HOH A 99 399 147 HOH HOH . M 5 HOH A 100 400 167 HOH HOH . M 5 HOH A 101 401 278 HOH HOH . M 5 HOH A 102 402 123 HOH HOH . M 5 HOH A 103 403 46 HOH HOH . M 5 HOH A 104 404 122 HOH HOH . M 5 HOH A 105 405 125 HOH HOH . M 5 HOH A 106 406 42 HOH HOH . M 5 HOH A 107 407 49 HOH HOH . M 5 HOH A 108 408 135 HOH HOH . M 5 HOH A 109 409 104 HOH HOH . M 5 HOH A 110 410 63 HOH HOH . M 5 HOH A 111 411 296 HOH HOH . M 5 HOH A 112 412 151 HOH HOH . M 5 HOH A 113 413 204 HOH HOH . M 5 HOH A 114 414 227 HOH HOH . M 5 HOH A 115 415 175 HOH HOH . M 5 HOH A 116 416 26 HOH HOH . M 5 HOH A 117 417 48 HOH HOH . M 5 HOH A 118 418 295 HOH HOH . M 5 HOH A 119 419 148 HOH HOH . M 5 HOH A 120 420 265 HOH HOH . M 5 HOH A 121 421 259 HOH HOH . M 5 HOH A 122 422 252 HOH HOH . M 5 HOH A 123 423 172 HOH HOH . M 5 HOH A 124 424 242 HOH HOH . M 5 HOH A 125 425 288 HOH HOH . M 5 HOH A 126 426 139 HOH HOH . M 5 HOH A 127 427 60 HOH HOH . M 5 HOH A 128 428 155 HOH HOH . M 5 HOH A 129 429 76 HOH HOH . M 5 HOH A 130 430 253 HOH HOH . M 5 HOH A 131 431 249 HOH HOH . M 5 HOH A 132 432 274 HOH HOH . M 5 HOH A 133 433 250 HOH HOH . M 5 HOH A 134 434 211 HOH HOH . M 5 HOH A 135 435 271 HOH HOH . M 5 HOH A 136 436 289 HOH HOH . M 5 HOH A 137 437 244 HOH HOH . M 5 HOH A 138 438 183 HOH HOH . M 5 HOH A 139 439 61 HOH HOH . M 5 HOH A 140 440 286 HOH HOH . M 5 HOH A 141 441 287 HOH HOH . M 5 HOH A 142 442 264 HOH HOH . M 5 HOH A 143 443 152 HOH HOH . M 5 HOH A 144 444 136 HOH HOH . M 5 HOH A 145 445 97 HOH HOH . M 5 HOH A 146 446 145 HOH HOH . M 5 HOH A 147 447 251 HOH HOH . M 5 HOH A 148 448 237 HOH HOH . N 5 HOH B 1 301 214 HOH HOH . N 5 HOH B 2 302 81 HOH HOH . N 5 HOH B 3 303 231 HOH HOH . N 5 HOH B 4 304 229 HOH HOH . N 5 HOH B 5 305 156 HOH HOH . N 5 HOH B 6 306 187 HOH HOH . N 5 HOH B 7 307 290 HOH HOH . N 5 HOH B 8 308 87 HOH HOH . N 5 HOH B 9 309 280 HOH HOH . N 5 HOH B 10 310 224 HOH HOH . N 5 HOH B 11 311 45 HOH HOH . N 5 HOH B 12 312 293 HOH HOH . N 5 HOH B 13 313 260 HOH HOH . N 5 HOH B 14 314 65 HOH HOH . N 5 HOH B 15 315 194 HOH HOH . N 5 HOH B 16 316 186 HOH HOH . N 5 HOH B 17 317 96 HOH HOH . N 5 HOH B 18 318 126 HOH HOH . N 5 HOH B 19 319 112 HOH HOH . N 5 HOH B 20 320 86 HOH HOH . N 5 HOH B 21 321 279 HOH HOH . N 5 HOH B 22 322 192 HOH HOH . N 5 HOH B 23 323 13 HOH HOH . N 5 HOH B 24 324 153 HOH HOH . N 5 HOH B 25 325 36 HOH HOH . N 5 HOH B 26 326 197 HOH HOH . N 5 HOH B 27 327 206 HOH HOH . N 5 HOH B 28 328 8 HOH HOH . N 5 HOH B 29 329 41 HOH HOH . N 5 HOH B 30 330 10 HOH HOH . N 5 HOH B 31 331 168 HOH HOH . N 5 HOH B 32 332 91 HOH HOH . N 5 HOH B 33 333 39 HOH HOH . N 5 HOH B 34 334 169 HOH HOH . N 5 HOH B 35 335 78 HOH HOH . N 5 HOH B 36 336 127 HOH HOH . N 5 HOH B 37 337 157 HOH HOH . N 5 HOH B 38 338 17 HOH HOH . N 5 HOH B 39 339 59 HOH HOH . N 5 HOH B 40 340 68 HOH HOH . N 5 HOH B 41 341 25 HOH HOH . N 5 HOH B 42 342 196 HOH HOH . N 5 HOH B 43 343 52 HOH HOH . N 5 HOH B 44 344 177 HOH HOH . N 5 HOH B 45 345 218 HOH HOH . N 5 HOH B 46 346 114 HOH HOH . N 5 HOH B 47 347 4 HOH HOH . N 5 HOH B 48 348 171 HOH HOH . N 5 HOH B 49 349 221 HOH HOH . N 5 HOH B 50 350 213 HOH HOH . N 5 HOH B 51 351 14 HOH HOH . N 5 HOH B 52 352 6 HOH HOH . N 5 HOH B 53 353 21 HOH HOH . N 5 HOH B 54 354 103 HOH HOH . N 5 HOH B 55 355 40 HOH HOH . N 5 HOH B 56 356 284 HOH HOH . N 5 HOH B 57 357 69 HOH HOH . N 5 HOH B 58 358 1 HOH HOH . N 5 HOH B 59 359 79 HOH HOH . N 5 HOH B 60 360 23 HOH HOH . N 5 HOH B 61 361 102 HOH HOH . N 5 HOH B 62 362 119 HOH HOH . N 5 HOH B 63 363 128 HOH HOH . N 5 HOH B 64 364 263 HOH HOH . N 5 HOH B 65 365 101 HOH HOH . N 5 HOH B 66 366 195 HOH HOH . N 5 HOH B 67 367 184 HOH HOH . N 5 HOH B 68 368 298 HOH HOH . N 5 HOH B 69 369 210 HOH HOH . N 5 HOH B 70 370 180 HOH HOH . N 5 HOH B 71 371 158 HOH HOH . N 5 HOH B 72 372 124 HOH HOH . N 5 HOH B 73 373 142 HOH HOH . N 5 HOH B 74 374 138 HOH HOH . N 5 HOH B 75 375 20 HOH HOH . N 5 HOH B 76 376 149 HOH HOH . N 5 HOH B 77 377 66 HOH HOH . N 5 HOH B 78 378 159 HOH HOH . N 5 HOH B 79 379 223 HOH HOH . N 5 HOH B 80 380 31 HOH HOH . N 5 HOH B 81 381 99 HOH HOH . N 5 HOH B 82 382 212 HOH HOH . N 5 HOH B 83 383 254 HOH HOH . N 5 HOH B 84 384 133 HOH HOH . N 5 HOH B 85 385 268 HOH HOH . N 5 HOH B 86 386 51 HOH HOH . N 5 HOH B 87 387 64 HOH HOH . N 5 HOH B 88 388 109 HOH HOH . N 5 HOH B 89 389 110 HOH HOH . N 5 HOH B 90 390 146 HOH HOH . N 5 HOH B 91 391 107 HOH HOH . N 5 HOH B 92 392 73 HOH HOH . N 5 HOH B 93 393 44 HOH HOH . N 5 HOH B 94 394 93 HOH HOH . N 5 HOH B 95 395 272 HOH HOH . N 5 HOH B 96 396 108 HOH HOH . N 5 HOH B 97 397 270 HOH HOH . N 5 HOH B 98 398 261 HOH HOH . N 5 HOH B 99 399 115 HOH HOH . N 5 HOH B 100 400 24 HOH HOH . N 5 HOH B 101 401 294 HOH HOH . N 5 HOH B 102 402 27 HOH HOH . N 5 HOH B 103 403 53 HOH HOH . N 5 HOH B 104 404 72 HOH HOH . N 5 HOH B 105 405 116 HOH HOH . N 5 HOH B 106 406 164 HOH HOH . N 5 HOH B 107 407 291 HOH HOH . N 5 HOH B 108 408 190 HOH HOH . N 5 HOH B 109 409 191 HOH HOH . N 5 HOH B 110 410 283 HOH HOH . N 5 HOH B 111 411 161 HOH HOH . N 5 HOH B 112 412 160 HOH HOH . N 5 HOH B 113 413 219 HOH HOH . N 5 HOH B 114 414 230 HOH HOH . N 5 HOH B 115 415 276 HOH HOH . N 5 HOH B 116 416 216 HOH HOH . N 5 HOH B 117 417 239 HOH HOH . N 5 HOH B 118 418 247 HOH HOH . N 5 HOH B 119 419 82 HOH HOH . N 5 HOH B 120 420 240 HOH HOH . N 5 HOH B 121 421 281 HOH HOH . N 5 HOH B 122 422 178 HOH HOH . N 5 HOH B 123 423 162 HOH HOH . N 5 HOH B 124 424 131 HOH HOH . N 5 HOH B 125 425 285 HOH HOH . N 5 HOH B 126 426 222 HOH HOH . N 5 HOH B 127 427 225 HOH HOH . N 5 HOH B 128 428 215 HOH HOH . N 5 HOH B 129 429 118 HOH HOH . N 5 HOH B 130 430 258 HOH HOH . N 5 HOH B 131 431 70 HOH HOH . N 5 HOH B 132 432 273 HOH HOH . N 5 HOH B 133 433 256 HOH HOH . N 5 HOH B 134 434 226 HOH HOH . N 5 HOH B 135 435 129 HOH HOH . N 5 HOH B 136 436 113 HOH HOH . N 5 HOH B 137 437 266 HOH HOH . N 5 HOH B 138 438 243 HOH HOH . N 5 HOH B 139 439 188 HOH HOH . N 5 HOH B 140 440 174 HOH HOH . N 5 HOH B 141 441 9 HOH HOH . N 5 HOH B 142 442 275 HOH HOH . N 5 HOH B 143 443 182 HOH HOH . N 5 HOH B 144 444 121 HOH HOH . N 5 HOH B 145 445 238 HOH HOH . N 5 HOH B 146 446 85 HOH HOH . N 5 HOH B 147 447 236 HOH HOH . N 5 HOH B 148 448 262 HOH HOH . N 5 HOH B 149 449 193 HOH HOH . N 5 HOH B 150 450 74 HOH HOH . N 5 HOH B 151 451 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 3 5.583 15.545 -289.324 1 11.25 ? PB GDP 203 B 1 HETATM 2 O O1B GDP . . . J 3 5.271 14.561 -290.424 1 11.69 ? O1B GDP 203 B 1 HETATM 3 O O2B GDP . . . J 3 6.306 16.747 -289.89 1 11.37 ? O2B GDP 203 B 1 HETATM 4 O O3B GDP . . . J 3 6.404 14.9 -288.236 1 11.57 ? O3B GDP 203 B 1 HETATM 5 O O3A GDP . . . J 3 4.191 15.995 -288.655 1 9.89 ? O3A GDP 203 B 1 HETATM 6 P PA GDP . . . J 3 3.47 17.41 -288.907 1 11.84 ? PA GDP 203 B 1 HETATM 7 O O1A GDP . . . J 3 3.229 17.637 -290.375 1 13.28 ? O1A GDP 203 B 1 HETATM 8 O O2A GDP . . . J 3 4.222 18.546 -288.264 1 12.74 ? O2A GDP 203 B 1 HETATM 9 O O5' GDP . . . J 3 2.091 17.159 -288.128 1 11.06 ? O5' GDP 203 B 1 HETATM 10 C C5' GDP . . . J 3 1.251 16.095 -288.57 1 11.65 ? C5' GDP 203 B 1 HETATM 11 C C4' GDP . . . J 3 -0.163 16.36 -288.096 1 11.1 ? C4' GDP 203 B 1 HETATM 12 O O4' GDP . . . J 3 -0.204 16.369 -286.672 1 13.03 ? O4' GDP 203 B 1 HETATM 13 C C3' GDP . . . J 3 -0.657 17.716 -288.552 1 13.02 ? C3' GDP 203 B 1 HETATM 14 O O3' GDP . . . J 3 -2.031 17.576 -288.907 1 16.21 ? O3' GDP 203 B 1 HETATM 15 C C2' GDP . . . J 3 -0.48 18.618 -287.352 1 14.83 ? C2' GDP 203 B 1 HETATM 16 O O2' GDP . . . J 3 -1.433 19.682 -287.285 1 15.74 ? O2' GDP 203 B 1 HETATM 17 C C1' GDP . . . J 3 -0.658 17.637 -286.21 1 13.46 ? C1' GDP 203 B 1 HETATM 18 N N9 GDP . . . J 3 0.126 18.01 -285.019 1 10.77 ? N9 GDP 203 B 1 HETATM 19 C C8 GDP . . . J 3 1.45 18.248 -284.921 1 10.01 ? C8 GDP 203 B 1 HETATM 20 N N7 GDP . . . J 3 1.777 18.545 -283.637 1 11.1 ? N7 GDP 203 B 1 HETATM 21 C C5 GDP . . . J 3 0.651 18.482 -282.911 1 9.44 ? C5 GDP 203 B 1 HETATM 22 C C6 GDP . . . J 3 0.268 18.674 -281.499 1 9.24 ? C6 GDP 203 B 1 HETATM 23 O O6 GDP . . . J 3 1.123 18.979 -280.636 1 10.6 ? O6 GDP 203 B 1 HETATM 24 N N1 GDP . . . J 3 -1.025 18.502 -281.19 1 10.01 ? N1 GDP 203 B 1 HETATM 25 C C2 GDP . . . J 3 -1.97 18.17 -282.082 1 9.89 ? C2 GDP 203 B 1 HETATM 26 N N2 GDP . . . J 3 -3.246 18.017 -281.675 1 12.51 ? N2 GDP 203 B 1 HETATM 27 N N3 GDP . . . J 3 -1.693 17.981 -283.386 1 11.37 ? N3 GDP 203 B 1 HETATM 28 C C4 GDP . . . J 3 -0.429 18.12 -283.828 1 11.52 ? C4 GDP 203 B 1 HETATM 29 H H4' GDP . . . J 3 -0.829 15.581 -288.492 1 13.31 ? H4' GDP 203 B 1 HETATM 30 H H3' GDP . . . J 3 -0.054 18.078 -289.397 1 15.63 ? H3' GDP 203 B 1 HETATM 31 H HO3' GDP . . . J 3 -2.376 18.43 -289.202 1 19.45 ? HO3' GDP 203 B 1 HETATM 32 H H2' GDP . . . J 3 0.546 19.013 -287.338 1 17.8 ? H2' GDP 203 B 1 HETATM 33 H HO2' GDP . . . J 3 -1.331 20.255 -288.057 1 18.89 ? HO2' GDP 203 B 1 HETATM 34 H H1' GDP . . . J 3 -1.725 17.583 -285.954 1 16.15 ? H1' GDP 203 B 1 HETATM 35 H H8 GDP . . . J 3 2.147 18.223 -285.749 1 12.01 ? H8 GDP 203 B 1 HETATM 36 H HN1 GDP . . . J 3 -1.312 18.632 -280.199 1 12.01 ? HN1 GDP 203 B 1 HETATM 37 H HN21 GDP . . . J 3 -3.485 18.155 -280.703 1 15.01 ? HN21 GDP 203 B 1 HETATM 38 H HN22 GDP . . . J 3 -3.962 17.77 -282.342 1 15.01 ? HN22 GDP 203 B 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 38 #