data_6MBV # _model_server_result.job_id c1fFD_vKtHy80prgnWPIug _model_server_result.datetime_utc '2025-08-31 21:23:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mbv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6MBV # _exptl.entry_id 6MBV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 123.109 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICOTINIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.27 _cell.angle_gamma 90 _cell.entry_id 6MBV _cell.length_a 42.078 _cell.length_b 41.139 _cell.length_c 71.761 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MBV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 91 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc2 A NE2 HIS 93 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc3 A ND1 HIS 116 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 E O HOH . A HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'C6 H5 N O2' _chem_comp.formula_weight 123.109 _chem_comp.id NIO _chem_comp.mon_nstd_flag . _chem_comp.name 'NICOTINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C1 NIO doub 250 n y N C5 NIO sing 251 n y C1 C2 NIO sing 252 n y C1 H1 NIO sing 253 n n C2 C3 NIO doub 254 n y C2 C6 NIO sing 255 n n C3 C4 NIO sing 256 n y C3 H3 NIO sing 257 n n C4 C5 NIO doub 258 n y C4 H4 NIO sing 259 n n C5 H5 NIO sing 260 n n C6 O1 NIO doub 261 n n C6 O2 NIO sing 262 n n O2 HO2 NIO sing 263 n n # _atom_sites.entry_id 6MBV _atom_sites.fract_transf_matrix[1][1] 0.023765 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006045 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 262 ZN ZN . C 3 NIO A 1 302 1 NIO NCA . D 4 GOL A 1 303 400 GOL GOL . E 5 HOH A 1 401 115 HOH HOH . E 5 HOH A 2 402 80 HOH HOH . E 5 HOH A 3 403 23 HOH HOH . E 5 HOH A 4 404 64 HOH HOH . E 5 HOH A 5 405 29 HOH HOH . E 5 HOH A 6 406 97 HOH HOH . E 5 HOH A 7 407 117 HOH HOH . E 5 HOH A 8 408 108 HOH HOH . E 5 HOH A 9 409 113 HOH HOH . E 5 HOH A 10 410 126 HOH HOH . E 5 HOH A 11 411 128 HOH HOH . E 5 HOH A 12 412 65 HOH HOH . E 5 HOH A 13 413 66 HOH HOH . E 5 HOH A 14 414 116 HOH HOH . E 5 HOH A 15 415 79 HOH HOH . E 5 HOH A 16 416 122 HOH HOH . E 5 HOH A 17 417 43 HOH HOH . E 5 HOH A 18 418 125 HOH HOH . E 5 HOH A 19 419 104 HOH HOH . E 5 HOH A 20 420 111 HOH HOH . E 5 HOH A 21 421 59 HOH HOH . E 5 HOH A 22 422 34 HOH HOH . E 5 HOH A 23 423 26 HOH HOH . E 5 HOH A 24 424 136 HOH HOH . E 5 HOH A 25 425 10 HOH HOH . E 5 HOH A 26 426 137 HOH HOH . E 5 HOH A 27 427 24 HOH HOH . E 5 HOH A 28 428 21 HOH HOH . E 5 HOH A 29 429 139 HOH HOH . E 5 HOH A 30 430 143 HOH HOH . E 5 HOH A 31 431 121 HOH HOH . E 5 HOH A 32 432 48 HOH HOH . E 5 HOH A 33 433 39 HOH HOH . E 5 HOH A 34 434 62 HOH HOH . E 5 HOH A 35 435 9 HOH HOH . E 5 HOH A 36 436 69 HOH HOH . E 5 HOH A 37 437 46 HOH HOH . E 5 HOH A 38 438 35 HOH HOH . E 5 HOH A 39 439 28 HOH HOH . E 5 HOH A 40 440 107 HOH HOH . E 5 HOH A 41 441 58 HOH HOH . E 5 HOH A 42 442 54 HOH HOH . E 5 HOH A 43 443 13 HOH HOH . E 5 HOH A 44 444 42 HOH HOH . E 5 HOH A 45 445 74 HOH HOH . E 5 HOH A 46 446 72 HOH HOH . E 5 HOH A 47 447 44 HOH HOH . E 5 HOH A 48 448 51 HOH HOH . E 5 HOH A 49 449 5 HOH HOH . E 5 HOH A 50 450 33 HOH HOH . E 5 HOH A 51 451 71 HOH HOH . E 5 HOH A 52 452 83 HOH HOH . E 5 HOH A 53 453 17 HOH HOH . E 5 HOH A 54 454 8 HOH HOH . E 5 HOH A 55 455 84 HOH HOH . E 5 HOH A 56 456 73 HOH HOH . E 5 HOH A 57 457 99 HOH HOH . E 5 HOH A 58 458 4 HOH HOH . E 5 HOH A 59 459 7 HOH HOH . E 5 HOH A 60 460 131 HOH HOH . E 5 HOH A 61 461 32 HOH HOH . E 5 HOH A 62 462 47 HOH HOH . E 5 HOH A 63 463 127 HOH HOH . E 5 HOH A 64 464 92 HOH HOH . E 5 HOH A 65 465 141 HOH HOH . E 5 HOH A 66 466 3 HOH HOH . E 5 HOH A 67 467 31 HOH HOH . E 5 HOH A 68 468 140 HOH HOH . E 5 HOH A 69 469 49 HOH HOH . E 5 HOH A 70 470 14 HOH HOH . E 5 HOH A 71 471 78 HOH HOH . E 5 HOH A 72 472 86 HOH HOH . E 5 HOH A 73 473 16 HOH HOH . E 5 HOH A 74 474 101 HOH HOH . E 5 HOH A 75 475 93 HOH HOH . E 5 HOH A 76 476 61 HOH HOH . E 5 HOH A 77 477 60 HOH HOH . E 5 HOH A 78 478 118 HOH HOH . E 5 HOH A 79 479 124 HOH HOH . E 5 HOH A 80 480 112 HOH HOH . E 5 HOH A 81 481 102 HOH HOH . E 5 HOH A 82 482 75 HOH HOH . E 5 HOH A 83 483 40 HOH HOH . E 5 HOH A 84 484 12 HOH HOH . E 5 HOH A 85 485 56 HOH HOH . E 5 HOH A 86 486 88 HOH HOH . E 5 HOH A 87 487 55 HOH HOH . E 5 HOH A 88 488 76 HOH HOH . E 5 HOH A 89 489 45 HOH HOH . E 5 HOH A 90 490 90 HOH HOH . E 5 HOH A 91 491 57 HOH HOH . E 5 HOH A 92 492 138 HOH HOH . E 5 HOH A 93 493 77 HOH HOH . E 5 HOH A 94 494 50 HOH HOH . E 5 HOH A 95 495 129 HOH HOH . E 5 HOH A 96 496 18 HOH HOH . E 5 HOH A 97 497 91 HOH HOH . E 5 HOH A 98 498 27 HOH HOH . E 5 HOH A 99 499 133 HOH HOH . E 5 HOH A 100 500 6 HOH HOH . E 5 HOH A 101 501 20 HOH HOH . E 5 HOH A 102 502 82 HOH HOH . E 5 HOH A 103 503 38 HOH HOH . E 5 HOH A 104 504 11 HOH HOH . E 5 HOH A 105 505 30 HOH HOH . E 5 HOH A 106 506 52 HOH HOH . E 5 HOH A 107 507 94 HOH HOH . E 5 HOH A 108 508 67 HOH HOH . E 5 HOH A 109 509 142 HOH HOH . E 5 HOH A 110 510 135 HOH HOH . E 5 HOH A 111 511 70 HOH HOH . E 5 HOH A 112 512 130 HOH HOH . E 5 HOH A 113 513 105 HOH HOH . E 5 HOH A 114 514 89 HOH HOH . E 5 HOH A 115 515 106 HOH HOH . E 5 HOH A 116 516 87 HOH HOH . E 5 HOH A 117 517 53 HOH HOH . E 5 HOH A 118 518 134 HOH HOH . E 5 HOH A 119 519 109 HOH HOH . E 5 HOH A 120 520 25 HOH HOH . E 5 HOH A 121 521 98 HOH HOH . E 5 HOH A 122 522 19 HOH HOH . E 5 HOH A 123 523 95 HOH HOH . E 5 HOH A 124 524 37 HOH HOH . E 5 HOH A 125 525 85 HOH HOH . E 5 HOH A 126 526 123 HOH HOH . E 5 HOH A 127 527 96 HOH HOH . E 5 HOH A 128 528 120 HOH HOH . E 5 HOH A 129 529 132 HOH HOH . E 5 HOH A 130 530 68 HOH HOH . E 5 HOH A 131 531 100 HOH HOH . E 5 HOH A 132 532 114 HOH HOH . E 5 HOH A 133 533 36 HOH HOH . E 5 HOH A 134 534 22 HOH HOH . E 5 HOH A 135 535 63 HOH HOH . E 5 HOH A 136 536 110 HOH HOH . E 5 HOH A 137 537 119 HOH HOH . E 5 HOH A 138 538 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NIO . . . C 3 -25.875 5.468 13.653 1 21.79 ? N NIO 302 A 1 HETATM 2 C C1 NIO . . . C 3 -26.153 4.33 14.261 1 19.24 ? C1 NIO 302 A 1 HETATM 3 C C2 NIO . . . C 3 -25.117 3.575 14.781 1 16.11 ? C2 NIO 302 A 1 HETATM 4 C C3 NIO . . . C 3 -23.817 3.962 14.684 1 18.16 ? C3 NIO 302 A 1 HETATM 5 C C4 NIO . . . C 3 -23.571 5.16 14.036 1 15.16 ? C4 NIO 302 A 1 HETATM 6 C C5 NIO . . . C 3 -24.628 5.895 13.527 1 19.39 ? C5 NIO 302 A 1 HETATM 7 C C6 NIO . . . C 3 -25.433 2.269 15.473 1 19.51 ? C6 NIO 302 A 1 HETATM 8 O O1 NIO . . . C 3 -26.625 1.917 15.444 1 23.19 ? O1 NIO 302 A 1 HETATM 9 O O2 NIO . . . C 3 -24.516 1.613 16.044 1 24.76 -1 O2 NIO 302 A 1 HETATM 10 H H1 NIO . . . C 3 -27.033 4.041 14.34 1 23.09 ? H1 NIO 302 A 1 HETATM 11 H H3 NIO . . . C 3 -23.127 3.446 15.034 1 21.81 ? H3 NIO 302 A 1 HETATM 12 H H4 NIO . . . C 3 -22.699 5.471 13.945 1 18.2 ? H4 NIO 302 A 1 HETATM 13 H H5 NIO . . . C 3 -24.461 6.702 13.095 1 23.28 ? H5 NIO 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 69 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 694 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #