data_6MCP # _model_server_result.job_id DUMJ20VBT1GznVM6fA6_tg _model_server_result.datetime_utc '2024-12-26 20:10:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mcp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":604}' # _entry.id 6MCP # _exptl.entry_id 6MCP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.58 _cell.angle_gamma 90 _cell.entry_id 6MCP _cell.length_a 106.86 _cell.length_b 112.43 _cell.length_c 155.22 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MCP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,HA,IA 1 1 C,D,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,JA,KA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 Q N N ? 4 S N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N ? 4 AA N N ? 4 BA N N ? 4 FA N N ? 4 GA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 50 B CYS 79 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 B SG CYS 55 B CYS 84 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc3 B NE2 HIS 132 B HIS 161 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc4 B NE2 HIS 137 B HIS 166 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 C OD1 ASN 305 C ASN 312 1_555 T MN MN . C MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc6 C OD1 ASP 317 C ASP 324 1_555 T MN MN . C MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc7 T MN MN . C MN 601 1_555 CA O1A ANP . C ANP 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc8 T MN MN . C MN 601 1_555 CA O1G ANP . C ANP 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc9 D SG CYS 50 D CYS 79 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc10 D SG CYS 55 D CYS 84 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc11 D NE2 HIS 132 D HIS 161 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc12 D NE2 HIS 137 D HIS 166 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 331 n n C1 C2 PEG sing 332 n n C1 H11 PEG sing 333 n n C1 H12 PEG sing 334 n n O1 HO1 PEG sing 335 n n C2 O2 PEG sing 336 n n C2 H21 PEG sing 337 n n C2 H22 PEG sing 338 n n O2 C3 PEG sing 339 n n C3 C4 PEG sing 340 n n C3 H31 PEG sing 341 n n C3 H32 PEG sing 342 n n C4 O4 PEG sing 343 n n C4 H41 PEG sing 344 n n C4 H42 PEG sing 345 n n O4 HO4 PEG sing 346 n n # _atom_sites.entry_id 6MCP _atom_sites.fract_transf_matrix[1][1] 0.009358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002608 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006688 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PG4 A 1 601 2 PG4 PG4 . F 4 PEG A 1 602 3 PEG PEG . G 4 PEG A 1 603 4 PEG PEG . H 4 PEG A 1 604 7 PEG PEG . I 4 PEG A 1 605 8 PEG PEG . J 5 P6G A 1 606 11 P6G P6G . K 5 P6G A 1 607 13 P6G P6G . L 4 PEG A 1 608 16 PEG PEG . M 4 PEG A 1 609 17 PEG PEG . N 4 PEG A 1 610 20 PEG PEG . O 3 PG4 A 1 611 25 PG4 PG4 . P 6 ZN B 1 301 214 ZN ZN . Q 4 PEG B 1 302 5 PEG PEG . R 5 P6G B 1 303 12 P6G P6G . S 4 PEG B 1 304 21 PEG PEG . T 7 MN C 1 601 531 MN MN . U 5 P6G C 1 602 6 P6G P6G . V 4 PEG C 1 603 9 PEG PEG . W 4 PEG C 1 604 14 PEG PEG . X 4 PEG C 1 605 15 PEG PEG . Y 4 PEG C 1 606 18 PEG PEG . Z 4 PEG C 1 607 19 PEG PEG . AA 4 PEG C 1 608 23 PEG PEG . BA 4 PEG C 1 609 24 PEG PEG . CA 8 ANP C 1 610 501 ANP ANP . DA 6 ZN D 1 301 214 ZN ZN . EA 3 PG4 D 1 302 1 PG4 PG4 . FA 4 PEG D 1 303 10 PEG PEG . GA 4 PEG D 1 304 22 PEG PEG . HA 9 HOH A 1 701 1 HOH HOH . HA 9 HOH A 2 702 104 HOH HOH . HA 9 HOH A 3 703 5 HOH HOH . HA 9 HOH A 4 704 17 HOH HOH . HA 9 HOH A 5 705 67 HOH HOH . HA 9 HOH A 6 706 33 HOH HOH . HA 9 HOH A 7 707 84 HOH HOH . HA 9 HOH A 8 708 11 HOH HOH . HA 9 HOH A 9 709 92 HOH HOH . HA 9 HOH A 10 710 19 HOH HOH . HA 9 HOH A 11 711 18 HOH HOH . HA 9 HOH A 12 712 69 HOH HOH . HA 9 HOH A 13 713 38 HOH HOH . HA 9 HOH A 14 714 4 HOH HOH . HA 9 HOH A 15 715 30 HOH HOH . HA 9 HOH A 16 716 35 HOH HOH . HA 9 HOH A 17 717 63 HOH HOH . HA 9 HOH A 18 718 95 HOH HOH . HA 9 HOH A 19 719 59 HOH HOH . HA 9 HOH A 20 720 10 HOH HOH . HA 9 HOH A 21 721 103 HOH HOH . HA 9 HOH A 22 722 88 HOH HOH . HA 9 HOH A 23 723 39 HOH HOH . HA 9 HOH A 24 724 87 HOH HOH . HA 9 HOH A 25 725 34 HOH HOH . HA 9 HOH A 26 726 16 HOH HOH . HA 9 HOH A 27 727 70 HOH HOH . HA 9 HOH A 28 728 26 HOH HOH . HA 9 HOH A 29 729 32 HOH HOH . HA 9 HOH A 30 730 60 HOH HOH . HA 9 HOH A 31 731 14 HOH HOH . HA 9 HOH A 32 732 15 HOH HOH . HA 9 HOH A 33 733 23 HOH HOH . HA 9 HOH A 34 734 108 HOH HOH . HA 9 HOH A 35 735 12 HOH HOH . HA 9 HOH A 36 736 7 HOH HOH . HA 9 HOH A 37 737 110 HOH HOH . HA 9 HOH A 38 738 64 HOH HOH . HA 9 HOH A 39 739 62 HOH HOH . HA 9 HOH A 40 740 57 HOH HOH . HA 9 HOH A 41 741 90 HOH HOH . HA 9 HOH A 42 742 6 HOH HOH . HA 9 HOH A 43 743 74 HOH HOH . HA 9 HOH A 44 744 21 HOH HOH . HA 9 HOH A 45 745 94 HOH HOH . HA 9 HOH A 46 746 8 HOH HOH . HA 9 HOH A 47 747 97 HOH HOH . HA 9 HOH A 48 748 27 HOH HOH . HA 9 HOH A 49 749 51 HOH HOH . HA 9 HOH A 50 750 65 HOH HOH . HA 9 HOH A 51 751 28 HOH HOH . HA 9 HOH A 52 752 54 HOH HOH . HA 9 HOH A 53 753 43 HOH HOH . HA 9 HOH A 54 754 29 HOH HOH . HA 9 HOH A 55 755 24 HOH HOH . HA 9 HOH A 56 756 80 HOH HOH . HA 9 HOH A 57 757 49 HOH HOH . HA 9 HOH A 58 758 72 HOH HOH . HA 9 HOH A 59 759 31 HOH HOH . HA 9 HOH A 60 760 66 HOH HOH . HA 9 HOH A 61 761 81 HOH HOH . HA 9 HOH A 62 762 42 HOH HOH . HA 9 HOH A 63 763 89 HOH HOH . HA 9 HOH A 64 764 71 HOH HOH . HA 9 HOH A 65 765 56 HOH HOH . HA 9 HOH A 66 766 48 HOH HOH . HA 9 HOH A 67 767 13 HOH HOH . HA 9 HOH A 68 768 9 HOH HOH . IA 9 HOH B 1 401 86 HOH HOH . IA 9 HOH B 2 402 61 HOH HOH . IA 9 HOH B 3 403 91 HOH HOH . IA 9 HOH B 4 404 22 HOH HOH . IA 9 HOH B 5 405 40 HOH HOH . IA 9 HOH B 6 406 78 HOH HOH . IA 9 HOH B 7 407 85 HOH HOH . IA 9 HOH B 8 408 2 HOH HOH . IA 9 HOH B 9 409 96 HOH HOH . IA 9 HOH B 10 410 55 HOH HOH . IA 9 HOH B 11 411 47 HOH HOH . IA 9 HOH B 12 412 50 HOH HOH . IA 9 HOH B 13 413 105 HOH HOH . IA 9 HOH B 14 414 46 HOH HOH . IA 9 HOH B 15 415 37 HOH HOH . IA 9 HOH B 16 416 82 HOH HOH . IA 9 HOH B 17 417 3 HOH HOH . IA 9 HOH B 18 418 107 HOH HOH . IA 9 HOH B 19 419 20 HOH HOH . IA 9 HOH B 20 420 83 HOH HOH . IA 9 HOH B 21 421 77 HOH HOH . IA 9 HOH B 22 422 52 HOH HOH . IA 9 HOH B 23 423 58 HOH HOH . JA 9 HOH C 1 701 45 HOH HOH . JA 9 HOH C 2 702 44 HOH HOH . JA 9 HOH C 3 703 93 HOH HOH . JA 9 HOH C 4 704 36 HOH HOH . JA 9 HOH C 5 705 68 HOH HOH . JA 9 HOH C 6 706 98 HOH HOH . JA 9 HOH C 7 707 76 HOH HOH . JA 9 HOH C 8 708 102 HOH HOH . JA 9 HOH C 9 709 109 HOH HOH . JA 9 HOH C 10 710 100 HOH HOH . JA 9 HOH C 11 711 53 HOH HOH . JA 9 HOH C 12 712 101 HOH HOH . JA 9 HOH C 13 713 41 HOH HOH . JA 9 HOH C 14 714 25 HOH HOH . KA 9 HOH D 1 401 73 HOH HOH . KA 9 HOH D 2 402 75 HOH HOH . KA 9 HOH D 3 403 79 HOH HOH . KA 9 HOH D 4 404 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . H 4 56.92 78.964 69.679 1 77.23 ? C1 PEG 604 A 1 HETATM 2 O O1 PEG . . . H 4 56.644 77.689 70.19 1 78.7 ? O1 PEG 604 A 1 HETATM 3 C C2 PEG . . . H 4 56.258 79.118 68.31 1 77.55 ? C2 PEG 604 A 1 HETATM 4 O O2 PEG . . . H 4 57.215 79.54 67.381 1 77.91 ? O2 PEG 604 A 1 HETATM 5 C C3 PEG . . . H 4 56.705 80.333 66.349 1 77.63 ? C3 PEG 604 A 1 HETATM 6 C C4 PEG . . . H 4 55.753 79.511 65.487 1 82.35 ? C4 PEG 604 A 1 HETATM 7 O O4 PEG . . . H 4 55.162 80.349 64.533 1 86.99 ? O4 PEG 604 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #