data_6MCP # _model_server_result.job_id Bq-oXo2EmDJu8PVLzpkGfw _model_server_result.datetime_utc '2024-12-26 19:56:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mcp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":606}' # _entry.id 6MCP # _exptl.entry_id 6MCP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 5 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.58 _cell.angle_gamma 90 _cell.entry_id 6MCP _cell.length_a 106.86 _cell.length_b 112.43 _cell.length_c 155.22 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MCP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,HA,IA 1 1 C,D,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,JA,KA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 R N N ? 5 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 50 B CYS 79 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 B SG CYS 55 B CYS 84 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc3 B NE2 HIS 132 B HIS 161 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc4 B NE2 HIS 137 B HIS 166 1_555 P ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 C OD1 ASN 305 C ASN 312 1_555 T MN MN . C MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc6 C OD1 ASP 317 C ASP 324 1_555 T MN MN . C MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc7 T MN MN . C MN 601 1_555 CA O1A ANP . C ANP 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc8 T MN MN . C MN 601 1_555 CA O1G ANP . C ANP 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc9 D SG CYS 50 D CYS 79 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc10 D SG CYS 55 D CYS 84 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc11 D NE2 HIS 132 D HIS 161 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc12 D NE2 HIS 137 D HIS 166 1_555 DA ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 287 n n O1 H1 P6G sing 288 n n C2 C3 P6G sing 289 n n C2 H21 P6G sing 290 n n C2 H22 P6G sing 291 n n C3 O4 P6G sing 292 n n C3 H31 P6G sing 293 n n C3 H32 P6G sing 294 n n O4 C5 P6G sing 295 n n C5 C6 P6G sing 296 n n C5 H51 P6G sing 297 n n C5 H52 P6G sing 298 n n C6 O7 P6G sing 299 n n C6 H61 P6G sing 300 n n C6 H62 P6G sing 301 n n O7 C8 P6G sing 302 n n C8 C9 P6G sing 303 n n C8 H81 P6G sing 304 n n C8 H82 P6G sing 305 n n C9 O10 P6G sing 306 n n C9 H91 P6G sing 307 n n C9 H92 P6G sing 308 n n O10 C11 P6G sing 309 n n C11 C12 P6G sing 310 n n C11 H111 P6G sing 311 n n C11 H112 P6G sing 312 n n C12 O13 P6G sing 313 n n C12 H121 P6G sing 314 n n C12 H122 P6G sing 315 n n O13 C14 P6G sing 316 n n C14 C15 P6G sing 317 n n C14 H141 P6G sing 318 n n C14 H142 P6G sing 319 n n C15 O16 P6G sing 320 n n C15 H151 P6G sing 321 n n C15 H152 P6G sing 322 n n O16 C17 P6G sing 323 n n C17 C18 P6G sing 324 n n C17 H171 P6G sing 325 n n C17 H172 P6G sing 326 n n C18 O19 P6G sing 327 n n C18 H181 P6G sing 328 n n C18 H182 P6G sing 329 n n O19 H19 P6G sing 330 n n # _atom_sites.entry_id 6MCP _atom_sites.fract_transf_matrix[1][1] 0.009358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002608 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006688 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PG4 A 1 601 2 PG4 PG4 . F 4 PEG A 1 602 3 PEG PEG . G 4 PEG A 1 603 4 PEG PEG . H 4 PEG A 1 604 7 PEG PEG . I 4 PEG A 1 605 8 PEG PEG . J 5 P6G A 1 606 11 P6G P6G . K 5 P6G A 1 607 13 P6G P6G . L 4 PEG A 1 608 16 PEG PEG . M 4 PEG A 1 609 17 PEG PEG . N 4 PEG A 1 610 20 PEG PEG . O 3 PG4 A 1 611 25 PG4 PG4 . P 6 ZN B 1 301 214 ZN ZN . Q 4 PEG B 1 302 5 PEG PEG . R 5 P6G B 1 303 12 P6G P6G . S 4 PEG B 1 304 21 PEG PEG . T 7 MN C 1 601 531 MN MN . U 5 P6G C 1 602 6 P6G P6G . V 4 PEG C 1 603 9 PEG PEG . W 4 PEG C 1 604 14 PEG PEG . X 4 PEG C 1 605 15 PEG PEG . Y 4 PEG C 1 606 18 PEG PEG . Z 4 PEG C 1 607 19 PEG PEG . AA 4 PEG C 1 608 23 PEG PEG . BA 4 PEG C 1 609 24 PEG PEG . CA 8 ANP C 1 610 501 ANP ANP . DA 6 ZN D 1 301 214 ZN ZN . EA 3 PG4 D 1 302 1 PG4 PG4 . FA 4 PEG D 1 303 10 PEG PEG . GA 4 PEG D 1 304 22 PEG PEG . HA 9 HOH A 1 701 1 HOH HOH . HA 9 HOH A 2 702 104 HOH HOH . HA 9 HOH A 3 703 5 HOH HOH . HA 9 HOH A 4 704 17 HOH HOH . HA 9 HOH A 5 705 67 HOH HOH . HA 9 HOH A 6 706 33 HOH HOH . HA 9 HOH A 7 707 84 HOH HOH . HA 9 HOH A 8 708 11 HOH HOH . HA 9 HOH A 9 709 92 HOH HOH . HA 9 HOH A 10 710 19 HOH HOH . HA 9 HOH A 11 711 18 HOH HOH . HA 9 HOH A 12 712 69 HOH HOH . HA 9 HOH A 13 713 38 HOH HOH . HA 9 HOH A 14 714 4 HOH HOH . HA 9 HOH A 15 715 30 HOH HOH . HA 9 HOH A 16 716 35 HOH HOH . HA 9 HOH A 17 717 63 HOH HOH . HA 9 HOH A 18 718 95 HOH HOH . HA 9 HOH A 19 719 59 HOH HOH . HA 9 HOH A 20 720 10 HOH HOH . HA 9 HOH A 21 721 103 HOH HOH . HA 9 HOH A 22 722 88 HOH HOH . HA 9 HOH A 23 723 39 HOH HOH . HA 9 HOH A 24 724 87 HOH HOH . HA 9 HOH A 25 725 34 HOH HOH . HA 9 HOH A 26 726 16 HOH HOH . HA 9 HOH A 27 727 70 HOH HOH . HA 9 HOH A 28 728 26 HOH HOH . HA 9 HOH A 29 729 32 HOH HOH . HA 9 HOH A 30 730 60 HOH HOH . HA 9 HOH A 31 731 14 HOH HOH . HA 9 HOH A 32 732 15 HOH HOH . HA 9 HOH A 33 733 23 HOH HOH . HA 9 HOH A 34 734 108 HOH HOH . HA 9 HOH A 35 735 12 HOH HOH . HA 9 HOH A 36 736 7 HOH HOH . HA 9 HOH A 37 737 110 HOH HOH . HA 9 HOH A 38 738 64 HOH HOH . HA 9 HOH A 39 739 62 HOH HOH . HA 9 HOH A 40 740 57 HOH HOH . HA 9 HOH A 41 741 90 HOH HOH . HA 9 HOH A 42 742 6 HOH HOH . HA 9 HOH A 43 743 74 HOH HOH . HA 9 HOH A 44 744 21 HOH HOH . HA 9 HOH A 45 745 94 HOH HOH . HA 9 HOH A 46 746 8 HOH HOH . HA 9 HOH A 47 747 97 HOH HOH . HA 9 HOH A 48 748 27 HOH HOH . HA 9 HOH A 49 749 51 HOH HOH . HA 9 HOH A 50 750 65 HOH HOH . HA 9 HOH A 51 751 28 HOH HOH . HA 9 HOH A 52 752 54 HOH HOH . HA 9 HOH A 53 753 43 HOH HOH . HA 9 HOH A 54 754 29 HOH HOH . HA 9 HOH A 55 755 24 HOH HOH . HA 9 HOH A 56 756 80 HOH HOH . HA 9 HOH A 57 757 49 HOH HOH . HA 9 HOH A 58 758 72 HOH HOH . HA 9 HOH A 59 759 31 HOH HOH . HA 9 HOH A 60 760 66 HOH HOH . HA 9 HOH A 61 761 81 HOH HOH . HA 9 HOH A 62 762 42 HOH HOH . HA 9 HOH A 63 763 89 HOH HOH . HA 9 HOH A 64 764 71 HOH HOH . HA 9 HOH A 65 765 56 HOH HOH . HA 9 HOH A 66 766 48 HOH HOH . HA 9 HOH A 67 767 13 HOH HOH . HA 9 HOH A 68 768 9 HOH HOH . IA 9 HOH B 1 401 86 HOH HOH . IA 9 HOH B 2 402 61 HOH HOH . IA 9 HOH B 3 403 91 HOH HOH . IA 9 HOH B 4 404 22 HOH HOH . IA 9 HOH B 5 405 40 HOH HOH . IA 9 HOH B 6 406 78 HOH HOH . IA 9 HOH B 7 407 85 HOH HOH . IA 9 HOH B 8 408 2 HOH HOH . IA 9 HOH B 9 409 96 HOH HOH . IA 9 HOH B 10 410 55 HOH HOH . IA 9 HOH B 11 411 47 HOH HOH . IA 9 HOH B 12 412 50 HOH HOH . IA 9 HOH B 13 413 105 HOH HOH . IA 9 HOH B 14 414 46 HOH HOH . IA 9 HOH B 15 415 37 HOH HOH . IA 9 HOH B 16 416 82 HOH HOH . IA 9 HOH B 17 417 3 HOH HOH . IA 9 HOH B 18 418 107 HOH HOH . IA 9 HOH B 19 419 20 HOH HOH . IA 9 HOH B 20 420 83 HOH HOH . IA 9 HOH B 21 421 77 HOH HOH . IA 9 HOH B 22 422 52 HOH HOH . IA 9 HOH B 23 423 58 HOH HOH . JA 9 HOH C 1 701 45 HOH HOH . JA 9 HOH C 2 702 44 HOH HOH . JA 9 HOH C 3 703 93 HOH HOH . JA 9 HOH C 4 704 36 HOH HOH . JA 9 HOH C 5 705 68 HOH HOH . JA 9 HOH C 6 706 98 HOH HOH . JA 9 HOH C 7 707 76 HOH HOH . JA 9 HOH C 8 708 102 HOH HOH . JA 9 HOH C 9 709 109 HOH HOH . JA 9 HOH C 10 710 100 HOH HOH . JA 9 HOH C 11 711 53 HOH HOH . JA 9 HOH C 12 712 101 HOH HOH . JA 9 HOH C 13 713 41 HOH HOH . JA 9 HOH C 14 714 25 HOH HOH . KA 9 HOH D 1 401 73 HOH HOH . KA 9 HOH D 2 402 75 HOH HOH . KA 9 HOH D 3 403 79 HOH HOH . KA 9 HOH D 4 404 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . J 5 82.699 45.882 32.089 1 103.65 ? O1 P6G 606 A 1 HETATM 2 C C2 P6G . . . J 5 81.61 46.361 31.348 1 104.64 ? C2 P6G 606 A 1 HETATM 3 C C3 P6G . . . J 5 81.718 47.878 31.205 1 108.13 ? C3 P6G 606 A 1 HETATM 4 O O4 P6G . . . J 5 80.458 48.46 31.386 1 109.02 ? O4 P6G 606 A 1 HETATM 5 C C5 P6G . . . J 5 80.492 49.816 31.742 1 105.83 ? C5 P6G 606 A 1 HETATM 6 C C6 P6G . . . J 5 79.153 50.219 32.366 1 96.18 ? C6 P6G 606 A 1 HETATM 7 O O7 P6G . . . J 5 79.25 51.455 33.022 1 90.61 ? O7 P6G 606 A 1 HETATM 8 C C8 P6G . . . J 5 80.378 51.61 33.836 1 91.46 ? C8 P6G 606 A 1 HETATM 9 C C9 P6G . . . J 5 80.337 52.966 34.543 1 93.08 ? C9 P6G 606 A 1 HETATM 10 O O10 P6G . . . J 5 81.084 53.927 33.847 1 98.31 ? O10 P6G 606 A 1 HETATM 11 C C11 P6G . . . J 5 82.376 53.526 33.482 1 99.76 ? C11 P6G 606 A 1 HETATM 12 C C12 P6G . . . J 5 82.941 54.512 32.462 1 102 ? C12 P6G 606 A 1 HETATM 13 O O13 P6G . . . J 5 84.034 53.935 31.805 1 106.1 ? O13 P6G 606 A 1 HETATM 14 C C14 P6G . . . J 5 83.729 52.777 31.081 1 104.66 ? C14 P6G 606 A 1 HETATM 15 C C15 P6G . . . J 5 84.895 52.442 30.153 1 100.16 ? C15 P6G 606 A 1 HETATM 16 O O16 P6G . . . J 5 84.999 51.055 30.035 1 100.01 ? O16 P6G 606 A 1 HETATM 17 C C17 P6G . . . J 5 86.137 50.515 30.642 1 103.61 ? C17 P6G 606 A 1 HETATM 18 C C18 P6G . . . J 5 86.086 48.992 30.542 1 105.2 ? C18 P6G 606 A 1 HETATM 19 O O19 P6G . . . J 5 84.826 48.547 30.961 1 103.21 ? O19 P6G 606 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #