data_6MCR # _model_server_result.job_id jaEtGv6XyLqbgtAqDo6zYg _model_server_result.datetime_utc '2024-11-24 23:22:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":104}' # _entry.id 6MCR # _exptl.entry_id 6MCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 688.83 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(3-fluorophenyl)-3-hydroxybutan-2-yl]carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MCR _cell.length_a 62.784 _cell.length_b 62.784 _cell.length_c 82.129 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 27.376333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C33 H41 F N4 O7 S2' _chem_comp.formula_weight 688.83 _chem_comp.id JDY _chem_comp.mon_nstd_flag . _chem_comp.name '(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(3-fluorophenyl)-3-hydroxybutan-2-yl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBO CBG JDY sing 182 n n CBO CBN JDY sing 183 n n CBG NBF JDY sing 184 n n CBG CBN JDY sing 185 n n NBF CBD JDY sing 186 n n CBD NBE JDY doub 187 n y CBD SBC JDY sing 188 n y NBE CAZ JDY sing 189 n y SBC CAY JDY sing 190 n y CAZ CBA JDY doub 191 n y CAZ CAY JDY sing 192 n y CBA CBB JDY sing 193 n y CAY CAX JDY doub 194 n y CBB CAS JDY doub 195 n y CAX CAS JDY sing 196 n y CAS SAR JDY sing 197 n n SAR OAU JDY doub 198 n n SAR OAV JDY doub 199 n n SAR NAQ JDY sing 200 n n CBR NAQ JDY sing 201 n n CBR CBS JDY sing 202 n n NAQ CAP JDY sing 203 n n CAP CAT JDY sing 204 n n CBT CBS JDY sing 205 n n CBS CBU JDY sing 206 n n CAT OBQ JDY sing 207 n n CAT CAO JDY sing 208 n n CAW CAO JDY sing 209 n n CAW CBH JDY sing 210 n n CBM CBH JDY doub 211 n y CBM CBL JDY sing 212 n y FBP CBL JDY sing 213 n n CAO NAN JDY sing 214 n n CBH CBI JDY sing 215 n y CBL CBK JDY doub 216 n y CBI CBJ JDY doub 217 n y CBK CBJ JDY sing 218 n y NAN CAL JDY sing 219 n n OAM CAL JDY doub 220 n n CAL OAK JDY sing 221 n n OAK CAF JDY sing 222 n n CAF CAD JDY sing 223 n n CAF CAG JDY sing 224 n n CAC CAD JDY sing 225 n n CAC OAB JDY sing 226 n n CAD CAE JDY sing 227 n n CAG CAJ JDY sing 228 n n CAG CAH JDY sing 229 n n OAB CAA JDY sing 230 n n CAJ OAI JDY sing 231 n n CAE CAH JDY sing 232 n n CAE CAA JDY sing 233 n n CAA OAI JDY sing 234 n n CAA HAA JDY sing 235 n n CAC HAD JDY sing 236 n n CAC HAC JDY sing 237 n n CAD HAE JDY sing 238 n n CAE HAF JDY sing 239 n n CAF HAG JDY sing 240 n n CAG HAH JDY sing 241 n n CAH HAI JDY sing 242 n n CAH HAJ JDY sing 243 n n CAJ HAK JDY sing 244 n n CAJ HAL JDY sing 245 n n CAO HAO JDY sing 246 n n CAP HAQ JDY sing 247 n n CAP HAP JDY sing 248 n n CAT HAT JDY sing 249 n n CAW HAX JDY sing 250 n n CAW HAW JDY sing 251 n n CAX HAY JDY sing 252 n n CBA HBA JDY sing 253 n n CBB HBB JDY sing 254 n n CBG HBG JDY sing 255 n n CBI HBI JDY sing 256 n n CBJ HBJ JDY sing 257 n n CBK HBK JDY sing 258 n n CBM HBM JDY sing 259 n n CBN HBO JDY sing 260 n n CBN HBN JDY sing 261 n n CBO HBQ JDY sing 262 n n CBO HBP JDY sing 263 n n CBR HBR JDY sing 264 n n CBR HBS JDY sing 265 n n CBS HBT JDY sing 266 n n CBT HBV JDY sing 267 n n CBT HBW JDY sing 268 n n CBT HBU JDY sing 269 n n CBU HBY JDY sing 270 n n CBU HBZ JDY sing 271 n n CBU HBX JDY sing 272 n n NAN HAN JDY sing 273 n n NBF HBF JDY sing 274 n n OBQ HB0 JDY sing 275 n n # _atom_sites.entry_id 6MCR _atom_sites.fract_transf_matrix[1][1] 0.015928 _atom_sites.fract_transf_matrix[1][2] 0.009196 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018392 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 101 1 EDO EDO . C 2 EDO A 1 102 2 EDO EDO . D 2 EDO A 1 103 3 EDO EDO . E 3 JDY A 1 104 1 JDY DRG . F 4 HOH A 1 201 2 HOH HOH . F 4 HOH A 2 202 5 HOH HOH . F 4 HOH A 3 203 15 HOH HOH . F 4 HOH A 4 204 28 HOH HOH . F 4 HOH A 5 205 19 HOH HOH . F 4 HOH A 6 206 2 HOH HOH . F 4 HOH A 7 207 3 HOH HOH . F 4 HOH A 8 208 1 HOH HOH . F 4 HOH A 9 209 7 HOH HOH . F 4 HOH A 10 210 17 HOH HOH . F 4 HOH A 11 211 12 HOH HOH . F 4 HOH A 12 212 36 HOH HOH . F 4 HOH A 13 213 14 HOH HOH . F 4 HOH A 14 214 4 HOH HOH . F 4 HOH A 15 215 8 HOH HOH . F 4 HOH A 16 216 3 HOH HOH . F 4 HOH A 17 217 7 HOH HOH . F 4 HOH A 18 218 9 HOH HOH . F 4 HOH A 19 219 11 HOH HOH . F 4 HOH A 20 220 11 HOH HOH . F 4 HOH A 21 221 26 HOH HOH . F 4 HOH A 22 222 14 HOH HOH . F 4 HOH A 23 223 13 HOH HOH . F 4 HOH A 24 224 29 HOH HOH . F 4 HOH A 25 225 6 HOH HOH . F 4 HOH A 26 226 10 HOH HOH . F 4 HOH A 27 227 4 HOH HOH . F 4 HOH A 28 228 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA JDY . . . E 3 -6.888 -17.626 21.259 0.5 14.94 ? CAA JDY 104 A 1 HETATM 2 C CAC JDY . . . E 3 -6.294 -18.192 19.025 0.5 17.92 ? CAC JDY 104 A 1 HETATM 3 C CAD JDY . . . E 3 -6.177 -16.709 19.134 0.5 15.8 ? CAD JDY 104 A 1 HETATM 4 C CAE JDY . . . E 3 -6.09 -16.482 20.712 0.5 25.56 ? CAE JDY 104 A 1 HETATM 5 C CAF JDY . . . E 3 -7.394 -15.871 18.614 0.5 28.5 ? CAF JDY 104 A 1 HETATM 6 C CAG JDY . . . E 3 -8.043 -15.563 19.92 0.5 18.02 ? CAG JDY 104 A 1 HETATM 7 C CAH JDY . . . E 3 -6.846 -15.243 20.846 0.5 23.32 ? CAH JDY 104 A 1 HETATM 8 C CAJ JDY . . . E 3 -8.865 -16.756 20.418 0.5 20.8 ? CAJ JDY 104 A 1 HETATM 9 C CAL JDY . . . E 3 -8.439 -16.213 16.433 0.5 11.98 ? CAL JDY 104 A 1 HETATM 10 C CAO JDY . . . E 3 -8.717 -17.305 14.146 0.5 18.07 ? CAO JDY 104 A 1 HETATM 11 C CAP JDY . . . E 3 -10.313 -17.304 12.134 0.5 17.08 ? CAP JDY 104 A 1 HETATM 12 C CAS JDY . . . E 3 -9.601 -15.421 9.469 0.5 14.27 ? CAS JDY 104 A 1 HETATM 13 C CAT JDY . . . E 3 -10.182 -17.627 13.641 0.5 14.25 ? CAT JDY 104 A 1 HETATM 14 C CAW JDY . . . E 3 -7.67 -18.35 13.68 0.5 13.2 ? CAW JDY 104 A 1 HETATM 15 C CAX JDY . . . E 3 -10.171 -14.39 8.821 0.5 13.5 ? CAX JDY 104 A 1 HETATM 16 C CAY JDY . . . E 3 -10.548 -14.584 7.584 0.5 18.8 ? CAY JDY 104 A 1 HETATM 17 C CAZ JDY . . . E 3 -10.347 -15.749 6.92 0.5 14.4 ? CAZ JDY 104 A 1 HETATM 18 C CBA JDY . . . E 3 -9.755 -16.744 7.504 0.5 14.95 ? CBA JDY 104 A 1 HETATM 19 C CBB JDY . . . E 3 -9.34 -16.6 8.814 0.5 15.31 ? CBB JDY 104 A 1 HETATM 20 C CBD JDY . . . E 3 -11.398 -14.584 5.371 0.5 17.26 ? CBD JDY 104 A 1 HETATM 21 C CBG JDY . . . E 3 -12.742 -13.173 3.809 0.5 26.72 ? CBG JDY 104 A 1 HETATM 22 C CBH JDY . . . E 3 -6.431 -18.034 14.148 0.5 16.17 ? CBH JDY 104 A 1 HETATM 23 C CBI JDY . . . E 3 -5.836 -18.845 15.09 0.5 17.62 ? CBI JDY 104 A 1 HETATM 24 C CBJ JDY . . . E 3 -4.606 -18.546 15.649 0.5 18.11 ? CBJ JDY 104 A 1 HETATM 25 C CBK JDY . . . E 3 -3.9 -17.454 15.208 0.5 16.18 ? CBK JDY 104 A 1 HETATM 26 C CBL JDY . . . E 3 -4.446 -16.656 14.224 0.5 16.84 ? CBL JDY 104 A 1 HETATM 27 C CBM JDY . . . E 3 -5.721 -16.93 13.692 0.5 16.28 ? CBM JDY 104 A 1 HETATM 28 C CBN JDY . . . E 3 -13.994 -12.842 4.624 0.5 17.84 ? CBN JDY 104 A 1 HETATM 29 C CBO JDY . . . E 3 -14.151 -13.484 3.303 0.5 22.55 ? CBO JDY 104 A 1 HETATM 30 C CBR JDY . . . E 3 -11.568 -15.366 11.813 0.5 13.23 ? CBR JDY 104 A 1 HETATM 31 C CBS JDY . . . E 3 -12.295 -14.982 13.128 0.5 12.38 ? CBS JDY 104 A 1 HETATM 32 C CBT JDY . . . E 3 -13.579 -14.411 12.599 0.5 20.41 ? CBT JDY 104 A 1 HETATM 33 C CBU JDY . . . E 3 -11.583 -13.886 13.881 0.5 22.34 ? CBU JDY 104 A 1 HETATM 34 F FBP JDY . . . E 3 -3.733 -15.702 13.873 0.5 29.12 ? FBP JDY 104 A 1 HETATM 35 N NAN JDY . . . E 3 -8.63 -17.265 15.594 0.5 13.2 ? NAN JDY 104 A 1 HETATM 36 N NAQ JDY . . . E 3 -10.286 -15.887 12.042 0.5 12.94 ? NAQ JDY 104 A 1 HETATM 37 N NBE JDY . . . E 3 -10.853 -15.737 5.712 0.5 26.11 ? NBE JDY 104 A 1 HETATM 38 N NBF JDY . . . E 3 -11.919 -14.353 4.155 0.5 26.25 ? NBF JDY 104 A 1 HETATM 39 O OAB JDY . . . E 3 -7.02 -18.622 20.16 0.5 21.91 ? OAB JDY 104 A 1 HETATM 40 O OAI JDY . . . E 3 -8.237 -17.341 21.561 0.5 15.67 ? OAI JDY 104 A 1 HETATM 41 O OAK JDY . . . E 3 -8.313 -16.548 17.787 0.5 16.21 ? OAK JDY 104 A 1 HETATM 42 O OAM JDY . . . E 3 -8.301 -15.109 16.102 0.5 10.13 ? OAM JDY 104 A 1 HETATM 43 O OAU JDY . . . E 3 -7.867 -16.075 11.232 0.5 17.81 ? OAU JDY 104 A 1 HETATM 44 O OAV JDY . . . E 3 -8.922 -13.94 11.422 0.5 14.99 ? OAV JDY 104 A 1 HETATM 45 O OBQ JDY . . . E 3 -10.552 -18.941 13.759 0.5 13.52 ? OBQ JDY 104 A 1 HETATM 46 S SAR JDY . . . E 3 -9.094 -15.243 11.047 0.5 15.65 ? SAR JDY 104 A 1 HETATM 47 S SBC JDY . . . E 3 -11.296 -13.515 6.55 0.5 19.42 ? SBC JDY 104 A 1 HETATM 48 H HAA JDY . . . E 3 -6.38 -18.066 22.118 0.5 17.93 ? HAA JDY 104 A 1 HETATM 49 H HAD JDY . . . E 3 -5.302 -18.644 19.02 0.5 21.5 ? HAD JDY 104 A 1 HETATM 50 H HAC JDY . . . E 3 -6.828 -18.458 18.113 0.5 21.5 ? HAC JDY 104 A 1 HETATM 51 H HAE JDY . . . E 3 -5.257 -16.37 18.657 0.5 18.96 ? HAE JDY 104 A 1 HETATM 52 H HAF JDY . . . E 3 -5.07 -16.425 21.09 0.5 30.67 ? HAF JDY 104 A 1 HETATM 53 H HAG JDY . . . E 3 -7.046 -14.952 18.141 0.5 34.2 ? HAG JDY 104 A 1 HETATM 54 H HAH JDY . . . E 3 -8.682 -14.686 19.821 0.5 21.62 ? HAH JDY 104 A 1 HETATM 55 H HAI JDY . . . E 3 -7.172 -15.088 21.875 0.5 27.98 ? HAI JDY 104 A 1 HETATM 56 H HAJ JDY . . . E 3 -6.277 -14.389 20.478 0.5 27.98 ? HAJ JDY 104 A 1 HETATM 57 H HAK JDY . . . E 3 -8.941 -17.501 19.627 0.5 24.96 ? HAK JDY 104 A 1 HETATM 58 H HAL JDY . . . E 3 -9.864 -16.417 20.693 0.5 24.96 ? HAL JDY 104 A 1 HETATM 59 H HAO JDY . . . E 3 -8.428 -16.332 13.751 0.5 21.68 ? HAO JDY 104 A 1 HETATM 60 H HAQ JDY . . . E 3 -9.476 -17.733 11.584 0.5 20.49 ? HAQ JDY 104 A 1 HETATM 61 H HAP JDY . . . E 3 -11.256 -17.689 11.747 0.5 20.49 ? HAP JDY 104 A 1 HETATM 62 H HAT JDY . . . E 3 -10.889 -17.011 14.197 0.5 17.1 ? HAT JDY 104 A 1 HETATM 63 H HAX JDY . . . E 3 -7.647 -18.373 12.591 0.5 15.84 ? HAX JDY 104 A 1 HETATM 64 H HAW JDY . . . E 3 -7.955 -19.333 14.054 0.5 15.84 ? HAW JDY 104 A 1 HETATM 65 H HAY JDY . . . E 3 -10.359 -13.442 9.324 0.5 16.2 ? HAY JDY 104 A 1 HETATM 66 H HBA JDY . . . E 3 -9.622 -17.692 6.981 0.5 17.94 ? HBA JDY 104 A 1 HETATM 67 H HBB JDY . . . E 3 -8.863 -17.429 9.337 0.5 18.37 ? HBB JDY 104 A 1 HETATM 68 H HBG JDY . . . E 3 -12.23 -12.337 3.332 0.5 32.06 ? HBG JDY 104 A 1 HETATM 69 H HBI JDY . . . E 3 -6.397 -19.693 15.481 0.5 21.14 ? HBI JDY 104 A 1 HETATM 70 H HBJ JDY . . . E 3 -4.178 -19.203 16.406 0.5 21.73 ? HBJ JDY 104 A 1 HETATM 71 H HBK JDY . . . E 3 -2.906 -17.243 15.602 0.5 19.41 ? HBK JDY 104 A 1 HETATM 72 H HBM JDY . . . E 3 -6.145 -16.283 12.924 0.5 19.53 ? HBM JDY 104 A 1 HETATM 73 H HBO JDY . . . E 3 -14.198 -13.444 5.509 0.5 21.41 ? HBO JDY 104 A 1 HETATM 74 H HBN JDY . . . E 3 -14.278 -11.793 4.716 0.5 21.41 ? HBN JDY 104 A 1 HETATM 75 H HBQ JDY . . . E 3 -14.463 -14.529 3.28 0.5 27.06 ? HBQ JDY 104 A 1 HETATM 76 H HBP JDY . . . E 3 -14.542 -12.878 2.486 0.5 27.06 ? HBP JDY 104 A 1 HETATM 77 H HBR JDY . . . E 3 -12.163 -16.112 11.286 0.5 15.87 ? HBR JDY 104 A 1 HETATM 78 H HBS JDY . . . E 3 -11.48 -14.478 11.186 0.5 15.87 ? HBS JDY 104 A 1 HETATM 79 H HBT JDY . . . E 3 -12.475 -15.854 13.757 0.5 14.85 ? HBT JDY 104 A 1 HETATM 80 H HBV JDY . . . E 3 -13.377 -13.464 12.1 0.5 24.49 ? HBV JDY 104 A 1 HETATM 81 H HBW JDY . . . E 3 -14.269 -14.247 13.426 0.5 24.49 ? HBW JDY 104 A 1 HETATM 82 H HBU JDY . . . E 3 -14.022 -15.11 11.889 0.5 24.49 ? HBU JDY 104 A 1 HETATM 83 H HBY JDY . . . E 3 -11.576 -12.977 13.281 0.5 26.81 ? HBY JDY 104 A 1 HETATM 84 H HBZ JDY . . . E 3 -10.557 -14.194 14.085 0.5 26.81 ? HBZ JDY 104 A 1 HETATM 85 H HBX JDY . . . E 3 -12.099 -13.697 14.822 0.5 26.81 ? HBX JDY 104 A 1 HETATM 86 H HAN JDY . . . E 3 -8.678 -18.156 16.046 0.5 15.84 ? HAN JDY 104 A 1 HETATM 87 H HBF JDY . . . E 3 -11.742 -15.017 3.429 0.5 31.5 ? HBF JDY 104 A 1 HETATM 88 H HB0 JDY . . . E 3 -11.489 -19.056 13.428 0.5 16.22 ? HB0 JDY 104 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 88 #