data_6MCU # _model_server_result.job_id XHTLQVJuCLZinCDs3FpZ1A _model_server_result.datetime_utc '2024-11-15 14:25:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mcu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":201}' # _entry.id 6MCU # _exptl.entry_id 6MCU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MCU _cell.length_a 65.874 _cell.length_b 73.992 _cell.length_c 349.989 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MCU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 PISA dimeric 2 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,U,X 1 1 B,C,V,W 2 1 E,H,P,Q,Y,BA 3 1 F,G,M,N,O,Z,AA 4 1 I,L,T,CA,FA 5 1 J,K,R,S,DA,EA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 P N N ? 2 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 F NZ LYS 108 F LYS 108 1_555 N C15 RET . F RET 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.26 ? covale ? covale2 G NZ LYS 108 G LYS 108 1_555 O C15 RET . G RET 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.263 ? covale ? covale3 H NZ LYS 108 H LYS 108 1_555 Q C15 RET . H RET 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.26 ? covale ? covale4 J NZ LYS 108 J LYS 108 1_555 R C15 RET . J RET 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.261 ? covale ? covale5 K NZ LYS 108 K LYS 108 1_555 S C15 RET . K RET 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.261 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6MCU _atom_sites.fract_transf_matrix[1][1] 0.01518 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002857 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 GOL F 1 201 4 GOL GOL . N 3 RET F 1 202 7 RET RET . O 3 RET G 1 201 12 RET RET . P 2 GOL H 1 201 3 GOL GOL . Q 3 RET H 1 202 8 RET RET . R 3 RET J 1 201 10 RET RET . S 3 RET K 1 201 6 RET RET . T 2 GOL L 1 201 1 GOL GOL . U 4 HOH A 1 201 12 HOH HOH . U 4 HOH A 2 202 2 HOH HOH . U 4 HOH A 3 203 11 HOH HOH . U 4 HOH A 4 204 106 HOH HOH . U 4 HOH A 5 205 1 HOH HOH . U 4 HOH A 6 206 30 HOH HOH . U 4 HOH A 7 207 8 HOH HOH . U 4 HOH A 8 208 10 HOH HOH . U 4 HOH A 9 209 136 HOH HOH . U 4 HOH A 10 210 13 HOH HOH . U 4 HOH A 11 211 102 HOH HOH . U 4 HOH A 12 212 15 HOH HOH . U 4 HOH A 13 213 112 HOH HOH . U 4 HOH A 14 214 104 HOH HOH . V 4 HOH B 1 201 22 HOH HOH . V 4 HOH B 2 202 128 HOH HOH . V 4 HOH B 3 203 18 HOH HOH . V 4 HOH B 4 204 119 HOH HOH . V 4 HOH B 5 205 124 HOH HOH . V 4 HOH B 6 206 146 HOH HOH . V 4 HOH B 7 207 51 HOH HOH . V 4 HOH B 8 208 17 HOH HOH . V 4 HOH B 9 209 19 HOH HOH . W 4 HOH C 1 201 127 HOH HOH . W 4 HOH C 2 202 132 HOH HOH . W 4 HOH C 3 203 21 HOH HOH . W 4 HOH C 4 204 121 HOH HOH . W 4 HOH C 5 205 126 HOH HOH . W 4 HOH C 6 206 148 HOH HOH . W 4 HOH C 7 207 117 HOH HOH . W 4 HOH C 8 208 120 HOH HOH . W 4 HOH C 9 209 135 HOH HOH . W 4 HOH C 10 210 137 HOH HOH . W 4 HOH C 11 211 24 HOH HOH . W 4 HOH C 12 212 23 HOH HOH . W 4 HOH C 13 213 27 HOH HOH . W 4 HOH C 14 214 130 HOH HOH . W 4 HOH C 15 215 133 HOH HOH . W 4 HOH C 16 216 134 HOH HOH . W 4 HOH C 17 217 129 HOH HOH . X 4 HOH D 1 201 144 HOH HOH . X 4 HOH D 2 202 143 HOH HOH . X 4 HOH D 3 203 142 HOH HOH . X 4 HOH D 4 204 4 HOH HOH . X 4 HOH D 5 205 5 HOH HOH . X 4 HOH D 6 206 139 HOH HOH . X 4 HOH D 7 207 115 HOH HOH . X 4 HOH D 8 208 109 HOH HOH . X 4 HOH D 9 209 145 HOH HOH . X 4 HOH D 10 210 29 HOH HOH . X 4 HOH D 11 211 141 HOH HOH . X 4 HOH D 12 212 138 HOH HOH . Y 4 HOH E 1 201 35 HOH HOH . Y 4 HOH E 2 202 163 HOH HOH . Y 4 HOH E 3 203 160 HOH HOH . Y 4 HOH E 4 204 156 HOH HOH . Y 4 HOH E 5 205 151 HOH HOH . Y 4 HOH E 6 206 42 HOH HOH . Y 4 HOH E 7 207 34 HOH HOH . Y 4 HOH E 8 208 32 HOH HOH . Y 4 HOH E 9 209 149 HOH HOH . Y 4 HOH E 10 210 177 HOH HOH . Y 4 HOH E 11 211 161 HOH HOH . Z 4 HOH F 1 301 56 HOH HOH . Z 4 HOH F 2 302 41 HOH HOH . Z 4 HOH F 3 303 33 HOH HOH . Z 4 HOH F 4 304 43 HOH HOH . Z 4 HOH F 5 305 166 HOH HOH . Z 4 HOH F 6 306 175 HOH HOH . Z 4 HOH F 7 307 153 HOH HOH . Z 4 HOH F 8 308 86 HOH HOH . Z 4 HOH F 9 309 164 HOH HOH . Z 4 HOH F 10 310 169 HOH HOH . Z 4 HOH F 11 311 176 HOH HOH . Z 4 HOH F 12 312 165 HOH HOH . Z 4 HOH F 13 313 168 HOH HOH . Z 4 HOH F 14 314 174 HOH HOH . AA 4 HOH G 1 301 182 HOH HOH . AA 4 HOH G 2 302 37 HOH HOH . AA 4 HOH G 3 303 183 HOH HOH . AA 4 HOH G 4 304 48 HOH HOH . AA 4 HOH G 5 305 45 HOH HOH . AA 4 HOH G 6 306 170 HOH HOH . AA 4 HOH G 7 307 180 HOH HOH . AA 4 HOH G 8 308 46 HOH HOH . AA 4 HOH G 9 309 9 HOH HOH . AA 4 HOH G 10 310 190 HOH HOH . AA 4 HOH G 11 311 214 HOH HOH . AA 4 HOH G 12 312 39 HOH HOH . AA 4 HOH G 13 313 44 HOH HOH . AA 4 HOH G 14 314 53 HOH HOH . BA 4 HOH H 1 301 189 HOH HOH . BA 4 HOH H 2 302 55 HOH HOH . BA 4 HOH H 3 303 125 HOH HOH . BA 4 HOH H 4 304 187 HOH HOH . BA 4 HOH H 5 305 188 HOH HOH . BA 4 HOH H 6 306 191 HOH HOH . BA 4 HOH H 7 307 20 HOH HOH . BA 4 HOH H 8 308 157 HOH HOH . BA 4 HOH H 9 309 50 HOH HOH . BA 4 HOH H 10 310 171 HOH HOH . BA 4 HOH H 11 311 181 HOH HOH . BA 4 HOH H 12 312 186 HOH HOH . BA 4 HOH H 13 313 38 HOH HOH . BA 4 HOH H 14 314 184 HOH HOH . BA 4 HOH H 15 315 167 HOH HOH . BA 4 HOH H 16 316 158 HOH HOH . CA 4 HOH I 1 201 197 HOH HOH . CA 4 HOH I 2 202 63 HOH HOH . CA 4 HOH I 3 203 57 HOH HOH . CA 4 HOH I 4 204 194 HOH HOH . CA 4 HOH I 5 205 61 HOH HOH . CA 4 HOH I 6 206 196 HOH HOH . CA 4 HOH I 7 207 59 HOH HOH . CA 4 HOH I 8 208 58 HOH HOH . DA 4 HOH J 1 301 69 HOH HOH . DA 4 HOH J 2 302 68 HOH HOH . DA 4 HOH J 3 303 75 HOH HOH . DA 4 HOH J 4 304 199 HOH HOH . DA 4 HOH J 5 305 67 HOH HOH . DA 4 HOH J 6 306 72 HOH HOH . DA 4 HOH J 7 307 62 HOH HOH . DA 4 HOH J 8 308 78 HOH HOH . DA 4 HOH J 9 309 198 HOH HOH . DA 4 HOH J 10 310 65 HOH HOH . DA 4 HOH J 11 311 66 HOH HOH . EA 4 HOH K 1 301 89 HOH HOH . EA 4 HOH K 2 302 79 HOH HOH . EA 4 HOH K 3 303 88 HOH HOH . EA 4 HOH K 4 304 85 HOH HOH . EA 4 HOH K 5 305 207 HOH HOH . EA 4 HOH K 6 306 87 HOH HOH . EA 4 HOH K 7 307 205 HOH HOH . EA 4 HOH K 8 308 83 HOH HOH . EA 4 HOH K 9 309 81 HOH HOH . EA 4 HOH K 10 310 84 HOH HOH . EA 4 HOH K 11 311 90 HOH HOH . EA 4 HOH K 12 312 204 HOH HOH . EA 4 HOH K 13 313 206 HOH HOH . FA 4 HOH L 1 301 97 HOH HOH . FA 4 HOH L 2 302 98 HOH HOH . FA 4 HOH L 3 303 99 HOH HOH . FA 4 HOH L 4 304 96 HOH HOH . FA 4 HOH L 5 305 74 HOH HOH . FA 4 HOH L 6 306 100 HOH HOH . FA 4 HOH L 7 307 192 HOH HOH . FA 4 HOH L 8 308 212 HOH HOH . FA 4 HOH L 9 309 213 HOH HOH . FA 4 HOH L 10 310 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . T 2 1.747 -19.751 142.032 1 50.69 ? C1 GOL 201 L 1 HETATM 2 O O1 GOL . . . T 2 2.975 -19.989 142.683 1 58.64 ? O1 GOL 201 L 1 HETATM 3 C C2 GOL . . . T 2 1.64 -18.274 141.676 1 49.24 ? C2 GOL 201 L 1 HETATM 4 O O2 GOL . . . T 2 2.928 -17.7 141.652 1 53.6 ? O2 GOL 201 L 1 HETATM 5 C C3 GOL . . . T 2 0.782 -17.55 142.708 1 45.46 ? C3 GOL 201 L 1 HETATM 6 O O3 GOL . . . T 2 -0.538 -18.044 142.662 1 46.97 ? O3 GOL 201 L 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #