data_6MDD # _model_server_result.job_id cJI7NFBVDEib7b44FzRHug _model_server_result.datetime_utc '2024-11-04 22:26:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mdd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6MDD # _exptl.entry_id 6MDD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 311.19 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[(2,3-dichlorophenyl)sulfanyl]-3H-imidazo[4,5-b]pyridin-2-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.96 _cell.angle_gamma 90 _cell.entry_id 6MDD _cell.length_a 46.419 _cell.length_b 214.8 _cell.length_c 56.092 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MDD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C12 H8 Cl2 N4 S' _chem_comp.formula_weight 311.19 _chem_comp.id JE7 _chem_comp.mon_nstd_flag . _chem_comp.name 5-[(2,3-dichlorophenyl)sulfanyl]-3H-imidazo[4,5-b]pyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N11 C8 JE7 sing 173 n n C8 N6 JE7 doub 174 n y C8 N4 JE7 sing 175 n y N6 C2 JE7 sing 176 n y N4 C1 JE7 sing 177 n y C17 C18 JE7 doub 178 n y C17 C14 JE7 sing 179 n y C2 C1 JE7 doub 180 n y C2 C5 JE7 sing 181 n y C1 N3 JE7 sing 182 n y C18 C15 JE7 sing 183 n y C14 C12 JE7 doub 184 n y C5 C9 JE7 doub 185 n y N3 C7 JE7 doub 186 n y C7 C9 JE7 sing 187 n y C7 S10 JE7 sing 188 n n C15 C13 JE7 doub 189 n y C15 CL1 JE7 sing 190 n n C12 C13 JE7 sing 191 n y C12 S10 JE7 sing 192 n n C13 CL2 JE7 sing 193 n n C14 H1 JE7 sing 194 n n C17 H2 JE7 sing 195 n n C18 H3 JE7 sing 196 n n C5 H4 JE7 sing 197 n n C9 H5 JE7 sing 198 n n N11 H6 JE7 sing 199 n n N11 H7 JE7 sing 200 n n N4 H8 JE7 sing 201 n n # _atom_sites.entry_id 6MDD _atom_sites.fract_transf_matrix[1][1] 0.021543 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00263 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01796 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JE7 A 1 601 1 JE7 LI1 . D 3 PO4 A 1 602 1 PO4 PO4 . E 2 JE7 B 1 601 2 JE7 LI1 . F 3 PO4 B 1 602 2 PO4 PO4 . G 4 HOH A 1 701 18 HOH HOH . G 4 HOH A 2 702 155 HOH HOH . G 4 HOH A 3 703 163 HOH HOH . G 4 HOH A 4 704 59 HOH HOH . G 4 HOH A 5 705 243 HOH HOH . G 4 HOH A 6 706 97 HOH HOH . G 4 HOH A 7 707 211 HOH HOH . G 4 HOH A 8 708 47 HOH HOH . G 4 HOH A 9 709 185 HOH HOH . G 4 HOH A 10 710 103 HOH HOH . G 4 HOH A 11 711 15 HOH HOH . G 4 HOH A 12 712 206 HOH HOH . G 4 HOH A 13 713 99 HOH HOH . G 4 HOH A 14 714 164 HOH HOH . G 4 HOH A 15 715 219 HOH HOH . G 4 HOH A 16 716 137 HOH HOH . G 4 HOH A 17 717 62 HOH HOH . G 4 HOH A 18 718 48 HOH HOH . G 4 HOH A 19 719 55 HOH HOH . G 4 HOH A 20 720 170 HOH HOH . G 4 HOH A 21 721 199 HOH HOH . G 4 HOH A 22 722 66 HOH HOH . G 4 HOH A 23 723 115 HOH HOH . G 4 HOH A 24 724 54 HOH HOH . G 4 HOH A 25 725 95 HOH HOH . G 4 HOH A 26 726 22 HOH HOH . G 4 HOH A 27 727 4 HOH HOH . G 4 HOH A 28 728 195 HOH HOH . G 4 HOH A 29 729 126 HOH HOH . G 4 HOH A 30 730 174 HOH HOH . G 4 HOH A 31 731 133 HOH HOH . G 4 HOH A 32 732 108 HOH HOH . G 4 HOH A 33 733 139 HOH HOH . G 4 HOH A 34 734 45 HOH HOH . G 4 HOH A 35 735 42 HOH HOH . G 4 HOH A 36 736 217 HOH HOH . G 4 HOH A 37 737 102 HOH HOH . G 4 HOH A 38 738 52 HOH HOH . G 4 HOH A 39 739 160 HOH HOH . G 4 HOH A 40 740 114 HOH HOH . G 4 HOH A 41 741 180 HOH HOH . G 4 HOH A 42 742 162 HOH HOH . G 4 HOH A 43 743 161 HOH HOH . G 4 HOH A 44 744 215 HOH HOH . G 4 HOH A 45 745 34 HOH HOH . G 4 HOH A 46 746 130 HOH HOH . G 4 HOH A 47 747 77 HOH HOH . G 4 HOH A 48 748 178 HOH HOH . G 4 HOH A 49 749 240 HOH HOH . G 4 HOH A 50 750 24 HOH HOH . G 4 HOH A 51 751 40 HOH HOH . G 4 HOH A 52 752 190 HOH HOH . G 4 HOH A 53 753 224 HOH HOH . G 4 HOH A 54 754 36 HOH HOH . G 4 HOH A 55 755 32 HOH HOH . G 4 HOH A 56 756 41 HOH HOH . G 4 HOH A 57 757 232 HOH HOH . G 4 HOH A 58 758 110 HOH HOH . G 4 HOH A 59 759 29 HOH HOH . G 4 HOH A 60 760 7 HOH HOH . G 4 HOH A 61 761 169 HOH HOH . G 4 HOH A 62 762 20 HOH HOH . G 4 HOH A 63 763 80 HOH HOH . G 4 HOH A 64 764 70 HOH HOH . G 4 HOH A 65 765 27 HOH HOH . G 4 HOH A 66 766 16 HOH HOH . G 4 HOH A 67 767 117 HOH HOH . G 4 HOH A 68 768 35 HOH HOH . G 4 HOH A 69 769 109 HOH HOH . G 4 HOH A 70 770 239 HOH HOH . G 4 HOH A 71 771 127 HOH HOH . G 4 HOH A 72 772 154 HOH HOH . G 4 HOH A 73 773 221 HOH HOH . G 4 HOH A 74 774 85 HOH HOH . G 4 HOH A 75 775 49 HOH HOH . G 4 HOH A 76 776 231 HOH HOH . G 4 HOH A 77 777 64 HOH HOH . G 4 HOH A 78 778 210 HOH HOH . G 4 HOH A 79 779 13 HOH HOH . G 4 HOH A 80 780 5 HOH HOH . G 4 HOH A 81 781 247 HOH HOH . G 4 HOH A 82 782 43 HOH HOH . G 4 HOH A 83 783 216 HOH HOH . G 4 HOH A 84 784 21 HOH HOH . G 4 HOH A 85 785 105 HOH HOH . G 4 HOH A 86 786 2 HOH HOH . G 4 HOH A 87 787 140 HOH HOH . G 4 HOH A 88 788 11 HOH HOH . G 4 HOH A 89 789 148 HOH HOH . G 4 HOH A 90 790 208 HOH HOH . G 4 HOH A 91 791 86 HOH HOH . G 4 HOH A 92 792 230 HOH HOH . G 4 HOH A 93 793 176 HOH HOH . G 4 HOH A 94 794 71 HOH HOH . G 4 HOH A 95 795 50 HOH HOH . G 4 HOH A 96 796 244 HOH HOH . G 4 HOH A 97 797 150 HOH HOH . G 4 HOH A 98 798 67 HOH HOH . G 4 HOH A 99 799 135 HOH HOH . G 4 HOH A 100 800 8 HOH HOH . G 4 HOH A 101 801 98 HOH HOH . G 4 HOH A 102 802 92 HOH HOH . G 4 HOH A 103 803 63 HOH HOH . G 4 HOH A 104 804 249 HOH HOH . G 4 HOH A 105 805 238 HOH HOH . G 4 HOH A 106 806 37 HOH HOH . G 4 HOH A 107 807 198 HOH HOH . G 4 HOH A 108 808 51 HOH HOH . G 4 HOH A 109 809 132 HOH HOH . G 4 HOH A 110 810 141 HOH HOH . G 4 HOH A 111 811 207 HOH HOH . G 4 HOH A 112 812 91 HOH HOH . G 4 HOH A 113 813 6 HOH HOH . G 4 HOH A 114 814 118 HOH HOH . G 4 HOH A 115 815 56 HOH HOH . G 4 HOH A 116 816 17 HOH HOH . G 4 HOH A 117 817 10 HOH HOH . G 4 HOH A 118 818 229 HOH HOH . G 4 HOH A 119 819 248 HOH HOH . G 4 HOH A 120 820 237 HOH HOH . G 4 HOH A 121 821 136 HOH HOH . G 4 HOH A 122 822 120 HOH HOH . G 4 HOH A 123 823 194 HOH HOH . G 4 HOH A 124 824 245 HOH HOH . G 4 HOH A 125 825 72 HOH HOH . G 4 HOH A 126 826 196 HOH HOH . G 4 HOH A 127 827 94 HOH HOH . G 4 HOH A 128 828 228 HOH HOH . G 4 HOH A 129 829 212 HOH HOH . G 4 HOH A 130 830 246 HOH HOH . G 4 HOH A 131 831 151 HOH HOH . H 4 HOH B 1 701 122 HOH HOH . H 4 HOH B 2 702 171 HOH HOH . H 4 HOH B 3 703 19 HOH HOH . H 4 HOH B 4 704 14 HOH HOH . H 4 HOH B 5 705 172 HOH HOH . H 4 HOH B 6 706 25 HOH HOH . H 4 HOH B 7 707 156 HOH HOH . H 4 HOH B 8 708 39 HOH HOH . H 4 HOH B 9 709 75 HOH HOH . H 4 HOH B 10 710 193 HOH HOH . H 4 HOH B 11 711 181 HOH HOH . H 4 HOH B 12 712 79 HOH HOH . H 4 HOH B 13 713 131 HOH HOH . H 4 HOH B 14 714 179 HOH HOH . H 4 HOH B 15 715 166 HOH HOH . H 4 HOH B 16 716 142 HOH HOH . H 4 HOH B 17 717 251 HOH HOH . H 4 HOH B 18 718 121 HOH HOH . H 4 HOH B 19 719 30 HOH HOH . H 4 HOH B 20 720 61 HOH HOH . H 4 HOH B 21 721 146 HOH HOH . H 4 HOH B 22 722 149 HOH HOH . H 4 HOH B 23 723 165 HOH HOH . H 4 HOH B 24 724 235 HOH HOH . H 4 HOH B 25 725 218 HOH HOH . H 4 HOH B 26 726 186 HOH HOH . H 4 HOH B 27 727 33 HOH HOH . H 4 HOH B 28 728 144 HOH HOH . H 4 HOH B 29 729 113 HOH HOH . H 4 HOH B 30 730 1 HOH HOH . H 4 HOH B 31 731 123 HOH HOH . H 4 HOH B 32 732 204 HOH HOH . H 4 HOH B 33 733 168 HOH HOH . H 4 HOH B 34 734 167 HOH HOH . H 4 HOH B 35 735 26 HOH HOH . H 4 HOH B 36 736 12 HOH HOH . H 4 HOH B 37 737 81 HOH HOH . H 4 HOH B 38 738 46 HOH HOH . H 4 HOH B 39 739 128 HOH HOH . H 4 HOH B 40 740 53 HOH HOH . H 4 HOH B 41 741 60 HOH HOH . H 4 HOH B 42 742 189 HOH HOH . H 4 HOH B 43 743 209 HOH HOH . H 4 HOH B 44 744 184 HOH HOH . H 4 HOH B 45 745 101 HOH HOH . H 4 HOH B 46 746 96 HOH HOH . H 4 HOH B 47 747 3 HOH HOH . H 4 HOH B 48 748 233 HOH HOH . H 4 HOH B 49 749 38 HOH HOH . H 4 HOH B 50 750 227 HOH HOH . H 4 HOH B 51 751 44 HOH HOH . H 4 HOH B 52 752 177 HOH HOH . H 4 HOH B 53 753 252 HOH HOH . H 4 HOH B 54 754 82 HOH HOH . H 4 HOH B 55 755 89 HOH HOH . H 4 HOH B 56 756 214 HOH HOH . H 4 HOH B 57 757 203 HOH HOH . H 4 HOH B 58 758 23 HOH HOH . H 4 HOH B 59 759 213 HOH HOH . H 4 HOH B 60 760 183 HOH HOH . H 4 HOH B 61 761 106 HOH HOH . H 4 HOH B 62 762 191 HOH HOH . H 4 HOH B 63 763 187 HOH HOH . H 4 HOH B 64 764 182 HOH HOH . H 4 HOH B 65 765 201 HOH HOH . H 4 HOH B 66 766 134 HOH HOH . H 4 HOH B 67 767 76 HOH HOH . H 4 HOH B 68 768 129 HOH HOH . H 4 HOH B 69 769 202 HOH HOH . H 4 HOH B 70 770 158 HOH HOH . H 4 HOH B 71 771 58 HOH HOH . H 4 HOH B 72 772 57 HOH HOH . H 4 HOH B 73 773 124 HOH HOH . H 4 HOH B 74 774 173 HOH HOH . H 4 HOH B 75 775 119 HOH HOH . H 4 HOH B 76 776 68 HOH HOH . H 4 HOH B 77 777 28 HOH HOH . H 4 HOH B 78 778 234 HOH HOH . H 4 HOH B 79 779 107 HOH HOH . H 4 HOH B 80 780 83 HOH HOH . H 4 HOH B 81 781 197 HOH HOH . H 4 HOH B 82 782 205 HOH HOH . H 4 HOH B 83 783 226 HOH HOH . H 4 HOH B 84 784 138 HOH HOH . H 4 HOH B 85 785 87 HOH HOH . H 4 HOH B 86 786 112 HOH HOH . H 4 HOH B 87 787 78 HOH HOH . H 4 HOH B 88 788 88 HOH HOH . H 4 HOH B 89 789 111 HOH HOH . H 4 HOH B 90 790 90 HOH HOH . H 4 HOH B 91 791 188 HOH HOH . H 4 HOH B 92 792 104 HOH HOH . H 4 HOH B 93 793 84 HOH HOH . H 4 HOH B 94 794 159 HOH HOH . H 4 HOH B 95 795 200 HOH HOH . H 4 HOH B 96 796 9 HOH HOH . H 4 HOH B 97 797 31 HOH HOH . H 4 HOH B 98 798 143 HOH HOH . H 4 HOH B 99 799 157 HOH HOH . H 4 HOH B 100 800 225 HOH HOH . H 4 HOH B 101 801 147 HOH HOH . H 4 HOH B 102 802 65 HOH HOH . H 4 HOH B 103 803 145 HOH HOH . H 4 HOH B 104 804 93 HOH HOH . H 4 HOH B 105 805 69 HOH HOH . H 4 HOH B 106 806 116 HOH HOH . H 4 HOH B 107 807 100 HOH HOH . H 4 HOH B 108 808 74 HOH HOH . H 4 HOH B 109 809 223 HOH HOH . H 4 HOH B 110 810 125 HOH HOH . H 4 HOH B 111 811 241 HOH HOH . H 4 HOH B 112 812 175 HOH HOH . H 4 HOH B 113 813 73 HOH HOH . H 4 HOH B 114 814 152 HOH HOH . H 4 HOH B 115 815 242 HOH HOH . H 4 HOH B 116 816 222 HOH HOH . H 4 HOH B 117 817 153 HOH HOH . H 4 HOH B 118 818 236 HOH HOH . H 4 HOH B 119 819 192 HOH HOH . H 4 HOH B 120 820 250 HOH HOH . H 4 HOH B 121 821 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JE7 . . . C 2 22.462 41.681 3.793 1 39.98 ? C1 JE7 601 A 1 HETATM 2 C C2 JE7 . . . C 2 23.451 40.695 3.778 1 39.33 ? C2 JE7 601 A 1 HETATM 3 C C12 JE7 . . . C 2 18.587 40.468 5.711 1 36.72 ? C12 JE7 601 A 1 HETATM 4 C C13 JE7 . . . C 2 17.424 40.914 6.353 1 38.89 ? C13 JE7 601 A 1 HETATM 5 C C14 JE7 . . . C 2 18.537 40.014 4.369 1 34.9 ? C14 JE7 601 A 1 HETATM 6 C C15 JE7 . . . C 2 16.221 40.972 5.653 1 39.46 ? C15 JE7 601 A 1 HETATM 7 C C17 JE7 . . . C 2 17.327 40.081 3.66 1 35.63 ? C17 JE7 601 A 1 HETATM 8 C C18 JE7 . . . C 2 16.176 40.593 4.297 1 36.33 ? C18 JE7 601 A 1 HETATM 9 C C5 JE7 . . . C 2 23.424 39.567 4.62 1 36.46 ? C5 JE7 601 A 1 HETATM 10 C C7 JE7 . . . C 2 21.369 40.512 5.509 1 33.37 ? C7 JE7 601 A 1 HETATM 11 C C8 JE7 . . . C 2 23.949 42.21 2.349 1 45.49 ? C8 JE7 601 A 1 HETATM 12 C C9 JE7 . . . C 2 22.346 39.499 5.521 1 33.17 ? C9 JE7 601 A 1 HETATM 13 N N11 JE7 . . . C 2 24.611 42.857 1.428 1 48.02 ? N11 JE7 601 A 1 HETATM 14 N N3 JE7 . . . C 2 21.428 41.582 4.666 1 37.52 ? N3 JE7 601 A 1 HETATM 15 N N4 JE7 . . . C 2 22.825 42.619 2.88 1 42.05 ? N4 JE7 601 A 1 HETATM 16 N N6 JE7 . . . C 2 24.31 41.086 2.827 1 42.9 ? N6 JE7 601 A 1 HETATM 17 S S10 JE7 . . . C 2 20.067 40.471 6.694 1 35.06 ? S10 JE7 601 A 1 HETATM 18 CL CL2 JE7 . . . C 2 17.468 41.457 8.022 1 43.87 ? CL2 JE7 601 A 1 HETATM 19 CL CL1 JE7 . . . C 2 14.821 41.583 6.508 1 44.22 ? CL1 JE7 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 19 #