data_6ME2 # _model_server_result.job_id O3aLK1FCJk9SffOvhypJrw _model_server_result.datetime_utc '2024-11-29 17:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6me2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 6ME2 # _exptl.entry_id 6ME2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ME2 _cell.length_a 122.3 _cell.length_b 122.3 _cell.length_c 122.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ME2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 91 A CYS 100 1_555 A SG CYS 168 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A C ILE 120 A ILE 129 1_555 A N YCM 121 A YCM 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 A C YCM 121 A YCM 130 1_555 A N HIS 122 A HIS 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale3 A C ASP 212 A ASP 1003 1_555 A N YCM 213 A YCM 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 A C YCM 213 A YCM 1004 1_555 A N SER 214 A SER 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 279 n n C1 O2 OLA sing 280 n n C1 C2 OLA sing 281 n n O2 HO2 OLA sing 282 n n C2 C3 OLA sing 283 n n C2 H21 OLA sing 284 n n C2 H22 OLA sing 285 n n C3 C4 OLA sing 286 n n C3 H31 OLA sing 287 n n C3 H32 OLA sing 288 n n C4 C5 OLA sing 289 n n C4 H41 OLA sing 290 n n C4 H42 OLA sing 291 n n C5 C6 OLA sing 292 n n C5 H51 OLA sing 293 n n C5 H52 OLA sing 294 n n C6 C7 OLA sing 295 n n C6 H61 OLA sing 296 n n C6 H62 OLA sing 297 n n C7 C8 OLA sing 298 n n C7 H71 OLA sing 299 n n C7 H72 OLA sing 300 n n C8 C9 OLA sing 301 n n C8 H81 OLA sing 302 n n C8 H82 OLA sing 303 n n C9 C10 OLA doub 304 z n C9 H9 OLA sing 305 n n C10 C11 OLA sing 306 n n C10 H10 OLA sing 307 n n C11 C12 OLA sing 308 n n C11 H111 OLA sing 309 n n C11 H112 OLA sing 310 n n C12 C13 OLA sing 311 n n C12 H121 OLA sing 312 n n C12 H122 OLA sing 313 n n C13 C14 OLA sing 314 n n C13 H131 OLA sing 315 n n C13 H132 OLA sing 316 n n C14 C15 OLA sing 317 n n C14 H141 OLA sing 318 n n C14 H142 OLA sing 319 n n C15 C16 OLA sing 320 n n C15 H151 OLA sing 321 n n C15 H152 OLA sing 322 n n C16 C17 OLA sing 323 n n C16 H161 OLA sing 324 n n C16 H162 OLA sing 325 n n C17 C18 OLA sing 326 n n C17 H171 OLA sing 327 n n C17 H172 OLA sing 328 n n C18 H181 OLA sing 329 n n C18 H182 OLA sing 330 n n C18 H183 OLA sing 331 n n # _atom_sites.entry_id 6ME2 _atom_sites.fract_transf_matrix[1][1] 0.008177 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JEV A 1 1201 999 JEV RES . C 3 OLA A 1 1202 1202 OLA OLA . D 3 OLA A 1 1203 1203 OLA OLA . E 4 PEG A 1 1204 1 PEG PEG . F 5 HOH A 1 1301 3 HOH HOH . F 5 HOH A 2 1302 1209 HOH HOH . F 5 HOH A 3 1303 1214 HOH HOH . F 5 HOH A 4 1304 2 HOH HOH . F 5 HOH A 5 1305 1224 HOH HOH . F 5 HOH A 6 1306 1229 HOH HOH . F 5 HOH A 7 1307 1218 HOH HOH . F 5 HOH A 8 1308 1210 HOH HOH . F 5 HOH A 9 1309 1227 HOH HOH . F 5 HOH A 10 1310 1208 HOH HOH . F 5 HOH A 11 1311 1219 HOH HOH . F 5 HOH A 12 1312 1225 HOH HOH . F 5 HOH A 13 1313 1223 HOH HOH . F 5 HOH A 14 1314 1 HOH HOH . F 5 HOH A 15 1315 1215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 OLA . . . D 3 5.927 -20.897 49.496 1 118.34 ? C5 OLA 1203 A 1 HETATM 2 C C6 OLA . . . D 3 5.858 -21.973 48.416 1 118.97 ? C6 OLA 1203 A 1 HETATM 3 C C7 OLA . . . D 3 6.491 -21.485 47.115 1 119.38 ? C7 OLA 1203 A 1 HETATM 4 C C8 OLA . . . D 3 6.476 -22.566 46.037 1 119.56 ? C8 OLA 1203 A 1 HETATM 5 C C9 OLA . . . D 3 7.86 -22.682 45.429 1 119.9 ? C9 OLA 1203 A 1 HETATM 6 C C10 OLA . . . D 3 8.148 -23.28 44.264 1 120.36 ? C10 OLA 1203 A 1 HETATM 7 C C11 OLA . . . D 3 7.129 -23.941 43.358 1 121.03 ? C11 OLA 1203 A 1 HETATM 8 C C12 OLA . . . D 3 7.485 -23.671 41.899 1 121.45 ? C12 OLA 1203 A 1 HETATM 9 C C13 OLA . . . D 3 6.266 -23.847 41 1 121.41 ? C13 OLA 1203 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #