data_6ME4 # _model_server_result.job_id -ytQs2c9pSCMncnZ-S0RvA _model_server_result.datetime_utc '2024-11-28 03:15:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6me4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 6ME4 # _exptl.entry_id 6ME4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.175 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[2-(2-iodo-5-methoxy-1H-indol-3-yl)ethyl]acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ME4 _cell.length_a 122.6 _cell.length_b 122.6 _cell.length_c 123.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ME4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 91 A CYS 100 1_555 A SG CYS 168 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A C ASP 212 A ASP 1003 1_555 A N YCM 213 A YCM 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C YCM 213 A YCM 1004 1_555 A N SER 214 A SER 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C13 H15 I N2 O2' _chem_comp.formula_weight 358.175 _chem_comp.id ML2 _chem_comp.mon_nstd_flag . _chem_comp.name N-[2-(2-iodo-5-methoxy-1H-indol-3-yl)ethyl]acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C16 ML2 sing 250 n n C16 N15 ML2 sing 251 n n C16 O17 ML2 doub 252 n n N15 C14 ML2 sing 253 n n C13 C14 ML2 sing 254 n n C13 C12 ML2 sing 255 n n C12 C2 ML2 doub 256 n y C12 C11 ML2 sing 257 n y I1 C2 ML2 sing 258 n n C2 N3 ML2 sing 259 n y C10 C11 ML2 doub 260 n y C10 C7 ML2 sing 261 n y C11 C4 ML2 sing 262 n y O8 C7 ML2 sing 263 n n O8 C9 ML2 sing 264 n n C7 C6 ML2 doub 265 n y N3 C4 ML2 sing 266 n y C4 C5 ML2 doub 267 n y C6 C5 ML2 sing 268 n y C5 H5 ML2 sing 269 n n C6 H6 ML2 sing 270 n n C9 H91 ML2 sing 271 n n C9 H92 ML2 sing 272 n n C9 H93 ML2 sing 273 n n C13 H131 ML2 sing 274 n n C13 H132 ML2 sing 275 n n N15 H15 ML2 sing 276 n n C18 H181 ML2 sing 277 n n C18 H182 ML2 sing 278 n n C18 H183 ML2 sing 279 n n N3 H3 ML2 sing 280 n n C10 H10 ML2 sing 281 n n C14 H141 ML2 sing 282 n n C14 H142 ML2 sing 283 n n # _atom_sites.entry_id 6ME4 _atom_sites.fract_transf_matrix[1][1] 0.008157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ML2 A 1 1201 999 ML2 RES . C 3 PEG A 1 1202 1207 PEG PEG . D 4 GOL A 1 1203 1208 GOL GOL . E 5 HOH A 1 1301 1202 HOH HOH . E 5 HOH A 2 1302 1206 HOH HOH . E 5 HOH A 3 1303 1205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 ML2 . . . B 2 23.01 -25.052 47.544 1 130.2 ? C2 ML2 1201 A 1 HETATM 2 C C4 ML2 . . . B 2 24.867 -25.994 48.337 1 128.72 ? C4 ML2 1201 A 1 HETATM 3 C C5 ML2 . . . B 2 25.849 -26.763 48.966 1 128.57 ? C5 ML2 1201 A 1 HETATM 4 C C6 ML2 . . . B 2 27.196 -26.378 48.911 1 129.12 ? C6 ML2 1201 A 1 HETATM 5 C C9 ML2 . . . B 2 29.226 -23.577 47.649 1 129.45 ? C9 ML2 1201 A 1 HETATM 6 C C12 ML2 . . . B 2 24.046 -24.238 47.186 1 127.77 ? C12 ML2 1201 A 1 HETATM 7 C C13 ML2 . . . B 2 23.937 -22.92 46.469 1 124.01 ? C13 ML2 1201 A 1 HETATM 8 N N15 ML2 . . . B 2 23.796 -20.502 46.876 1 119.56 ? N15 ML2 1201 A 1 HETATM 9 C C16 ML2 . . . B 2 23.338 -19.458 47.579 1 118.79 ? C16 ML2 1201 A 1 HETATM 10 C C18 ML2 . . . B 2 23.07 -18.206 46.74 1 117.56 ? C18 ML2 1201 A 1 HETATM 11 I I1 ML2 . . . B 2 20.994 -24.702 47.047 1 133.58 ? I1 ML2 1201 A 1 HETATM 12 N N3 ML2 . . . B 2 23.497 -26.131 48.227 1 129.18 ? N3 ML2 1201 A 1 HETATM 13 C C7 ML2 . . . B 2 27.577 -25.199 48.262 1 129.23 ? C7 ML2 1201 A 1 HETATM 14 O O8 ML2 . . . B 2 28.904 -24.855 48.233 1 129.83 ? O8 ML2 1201 A 1 HETATM 15 C C10 ML2 . . . B 2 26.589 -24.417 47.651 1 129.13 ? C10 ML2 1201 A 1 HETATM 16 C C11 ML2 . . . B 2 25.247 -24.81 47.697 1 128.77 ? C11 ML2 1201 A 1 HETATM 17 C C14 ML2 . . . B 2 24.13 -21.793 47.488 1 121.67 ? C14 ML2 1201 A 1 HETATM 18 O O17 ML2 . . . B 2 23.152 -19.466 48.798 1 119.95 ? O17 ML2 1201 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #